BLASTX nr result

ID: Coptis23_contig00005050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005050
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45146.1| unknown [Lotus japonicus]                               92   3e-17
dbj|BAK05866.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   3e-17
ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, ...    91   1e-16
ref|XP_003566911.1| PREDICTED: probable glutamyl-tRNA synthetase...    91   1e-16
dbj|BAJ95658.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   1e-16

>gb|AFK45146.1| unknown [Lotus japonicus]
          Length = 255

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/82 (56%), Positives = 58/82 (70%)
 Frame = +1

Query: 70  SLIFSADSPPLSVIATAKIIGHSLIMDSSLPSGARPILQFCSGSKLHNTDVLLRYLARVA 249
           +L F+A SPPL VIA  K+ G S  +D+SLP  + P   F +G KLH T VLLRY+ RV+
Sbjct: 5   TLAFAAASPPLPVIAALKLAGVSPSVDTSLPPDSAPAFIFSNGLKLHGTSVLLRYVGRVS 64

Query: 250 KLSNFYGKDALEAGQIDEWLEY 315
            L +FYG++A E GQIDEWLEY
Sbjct: 65  GLVDFYGQNAFETGQIDEWLEY 86


>dbj|BAK05866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 720

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/81 (50%), Positives = 59/81 (72%)
 Frame = +1

Query: 73  LIFSADSPPLSVIATAKIIGHSLIMDSSLPSGARPILQFCSGSKLHNTDVLLRYLARVAK 252
           L F  +SPPLS+I+ AKI G S+I+D +L SG+ P L F SG  +H  + +LRY+AR A 
Sbjct: 5   LAFPQESPPLSIISAAKIAGVSIIIDPTLASGSVPTLHFSSGDFIHGVNTILRYIARAAS 64

Query: 253 LSNFYGKDALEAGQIDEWLEY 315
           +S+FYG+D ++A  +D+WLEY
Sbjct: 65  VSSFYGQDDIQAAHVDQWLEY 85


>ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like
           [Cucumis sativus]
          Length = 729

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/81 (54%), Positives = 53/81 (65%)
 Frame = +1

Query: 73  LIFSADSPPLSVIATAKIIGHSLIMDSSLPSGARPILQFCSGSKLHNTDVLLRYLARVAK 252
           L F AD+ P SVI  AK+ G +   DSSLPS + P   F  G KLH   VLLRY+ RV  
Sbjct: 6   LSFPADNTPFSVIVAAKLAGITFPSDSSLPSASPPTFFFTDGLKLHGASVLLRYIGRVTN 65

Query: 253 LSNFYGKDALEAGQIDEWLEY 315
           + NFYG++A E+ QIDEWLEY
Sbjct: 66  IPNFYGQNAFESSQIDEWLEY 86


>ref|XP_003566911.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
           [Brachypodium distachyon]
          Length = 720

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/84 (47%), Positives = 58/84 (69%)
 Frame = +1

Query: 64  DMSLIFSADSPPLSVIATAKIIGHSLIMDSSLPSGARPILQFCSGSKLHNTDVLLRYLAR 243
           +  L F  DSPPLS+++ AKI G  L +D +L SG+ P L   SG  +H  + +LRY+AR
Sbjct: 2   EAKLAFPQDSPPLSILSAAKIAGVPLTIDPTLASGSVPTLHLSSGDFIHGVNTILRYIAR 61

Query: 244 VAKLSNFYGKDALEAGQIDEWLEY 315
            A +S+FYG+DA++A  +D+WLEY
Sbjct: 62  AASVSSFYGQDAIQAAHVDQWLEY 85


>dbj|BAJ95658.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 658

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = +1

Query: 64  DMSLIFSADSPPLSVIATAKIIGHSLIMDSSLPSGARPILQFCSGSKLHNTDVLLRYLAR 243
           ++ L F  DS PLS+I+ AKI G  LI+D +L SG+ P L F SG  +H  + +LRY+AR
Sbjct: 2   ELKLAFPQDSLPLSIISAAKIAGVPLIIDPTLASGSVPTLHFSSGDFIHGVNTILRYIAR 61

Query: 244 VAKLSNFYGKDALEAGQIDEWLEY 315
            A +S+FYG+D ++A  +D+WLEY
Sbjct: 62  AASVSSFYGQDHIQASHVDQWLEY 85


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