BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005041
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00895.1| putative zinc finger CCCH-type family protein, pa...    62   3e-07
ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group] g...    62   4e-07
gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]               62   4e-07
ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containin...    62   4e-07
ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [S...    62   4e-07

>gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
           guineensis]
          Length = 307

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 19/80 (23%)
 Frame = +3

Query: 198 RLMRDAQ----------LLFGSC-------R*TFGGDDKECKICSKPFDVTGWEAKREVR 326
           RL+RDAQ          ++  SC       R T    DKECKIC++PF V  W   R+ R
Sbjct: 4   RLLRDAQADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDAR 63

Query: 327 --KTVICYPCCKLQNVCQLC 380
             KT +C  CCKL+NVCQ+C
Sbjct: 64  YKKTEVCQTCCKLKNVCQVC 83


>ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
           gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 40; Short=OsC3H40
           gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa
           Japonica Group] gi|125596196|gb|EAZ35976.1| hypothetical
           protein OsJ_20278 [Oryza sativa Japonica Group]
           gi|215767752|dbj|BAG99980.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 482

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 258 DKECKICSKPFDVTGWEAKREVR--KTVICYPCCKLQNVCQLCGMFPDRSLLQQFKVSPE 431
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C +  +  L  Q + +  
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL 100

Query: 432 PLLEKLSVPRT 464
            +    ++PR+
Sbjct: 101 AINSNDAIPRS 111


>gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
          Length = 493

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 258 DKECKICSKPFDVTGWEAKREVR--KTVICYPCCKLQNVCQLCGMFPDRSLLQQFKVSPE 431
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C +  +  L  Q + +  
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL 100

Query: 432 PLLEKLSVPRT 464
            +    ++PR+
Sbjct: 101 SINSNDAIPRS 111


>ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Brachypodium distachyon]
          Length = 488

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 258 DKECKICSKPFDVTGWEAKREVR--KTVICYPCCKLQNVCQLCGMFPDRSLLQQFKVSPE 431
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C +  +  L  Q + +  
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL 100

Query: 432 PLLEKLSVPRT 464
            +    ++PR+
Sbjct: 101 AINSNDAIPRS 111


>ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
           gi|241934233|gb|EES07378.1| hypothetical protein
           SORBIDRAFT_04g030200 [Sorghum bicolor]
          Length = 491

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 258 DKECKICSKPFDVTGWEAKREVR--KTVICYPCCKLQNVCQLCGMFPDRSLLQQFKVSPE 431
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C +  +  L  Q + +  
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL 100

Query: 432 PLLEKLSVPRT 464
            +    ++PR+
Sbjct: 101 AINSNDAIPRS 111