BLASTX nr result

ID: Coptis23_contig00005040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005040
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878511.1| kinase family protein [Arabidopsis lyrata su...   118   1e-30
ref|XP_002307608.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27
ref|XP_002520940.1| protein phosphatase 2c, putative [Ricinus co...   121   2e-25
ref|XP_002274621.2| PREDICTED: uncharacterized protein LOC100263...   117   3e-24
emb|CBI25042.3| unnamed protein product [Vitis vinifera]              117   3e-24

>ref|XP_002878511.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324349|gb|EFH54770.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  118 bits (296), Expect(2) = 1e-30
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = +2

Query: 398 KVRRPSSWWQWLRTTDAGKEAMHSLIWLLLTALKSCHDRNITHRDIKPENMAMCIEDEST 577
           ++ RPS WW WL+TT++GKE M  +IW LL  LK+CHDRNITHRDIKPENM +CIED  +
Sbjct: 108 QILRPSKWWTWLKTTESGKEEMRRIIWQLLLGLKACHDRNITHRDIKPENMVICIEDIKS 167

Query: 578 GRCSEGIPTGDKQYQIKM 631
           GRC +G+P GD  ++ KM
Sbjct: 168 GRCLKGVPNGDHNFKTKM 185



 Score = 41.6 bits (96), Expect(2) = 1e-30
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 313 SNVSASHIARYVEYFEY*YKEMWLVFQNEG 402
           S     HIARY+EYFE  Y ++WLVF +EG
Sbjct: 50  SEEGLKHIARYIEYFESRYNDIWLVFHHEG 79


>ref|XP_002307608.1| predicted protein [Populus trichocarpa] gi|222857057|gb|EEE94604.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  129 bits (323), Expect = 1e-27
 Identities = 55/80 (68%), Positives = 66/80 (82%)
 Frame = +2

Query: 392 RMKVRRPSSWWQWLRTTDAGKEAMHSLIWLLLTALKSCHDRNITHRDIKPENMAMCIEDE 571
           R++V +PS WW WL+TT AGKE M +LIW LL ALKSCHDRNITHRDIKPENM +C+ED+
Sbjct: 138 RIEVLQPSKWWHWLKTTKAGKEEMRNLIWQLLIALKSCHDRNITHRDIKPENMVVCLEDQ 197

Query: 572 STGRCSEGIPTGDKQYQIKM 631
            TGRC +G P+GDK Y +KM
Sbjct: 198 HTGRCLKGGPSGDKNYTVKM 217


>ref|XP_002520940.1| protein phosphatase 2c, putative [Ricinus communis]
            gi|223539777|gb|EEF41357.1| protein phosphatase 2c,
            putative [Ricinus communis]
          Length = 1058

 Score =  121 bits (304), Expect = 2e-25
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = +2

Query: 395  MKVRRPSSWWQWLRTTDAGKEAMHSLIWLLLTALKSCHDRNITHRDIKPENMAMCIEDES 574
            ++V   S WW WLRTT AGKE M +LIW LL ALKSCHDRNITHRDIKPENM +C ED+ 
Sbjct: 821  VQVLHTSKWWHWLRTTKAGKEEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDQD 880

Query: 575  TGRCSEGIPTGDKQYQIKM 631
            TG+C +G P+GDK Y  KM
Sbjct: 881  TGKCLKGGPSGDKNYTTKM 899


>ref|XP_002274621.2| PREDICTED: uncharacterized protein LOC100263200 [Vitis vinifera]
          Length = 1211

 Score =  117 bits (293), Expect = 3e-24
 Identities = 51/79 (64%), Positives = 62/79 (78%)
 Frame = +2

Query: 395  MKVRRPSSWWQWLRTTDAGKEAMHSLIWLLLTALKSCHDRNITHRDIKPENMAMCIEDES 574
            ++V  PS WW+WL+TT+AG+E M +LI  LL ALKSCHDRNITHRDIKPENM +C ED  
Sbjct: 984  IQVLHPSKWWRWLKTTEAGQEEMRNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDRD 1043

Query: 575  TGRCSEGIPTGDKQYQIKM 631
            TGRC +G P+ DK+Y  KM
Sbjct: 1044 TGRCMKGTPSEDKKYTTKM 1062


>emb|CBI25042.3| unnamed protein product [Vitis vinifera]
          Length = 1069

 Score =  117 bits (293), Expect = 3e-24
 Identities = 51/79 (64%), Positives = 62/79 (78%)
 Frame = +2

Query: 395  MKVRRPSSWWQWLRTTDAGKEAMHSLIWLLLTALKSCHDRNITHRDIKPENMAMCIEDES 574
            ++V  PS WW+WL+TT+AG+E M +LI  LL ALKSCHDRNITHRDIKPENM +C ED  
Sbjct: 796  IQVLHPSKWWRWLKTTEAGQEEMRNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDRD 855

Query: 575  TGRCSEGIPTGDKQYQIKM 631
            TGRC +G P+ DK+Y  KM
Sbjct: 856  TGRCMKGTPSEDKKYTTKM 874


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