BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005038
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   165   2e-38
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   164   4e-38
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   163   8e-38
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...   154   3e-35
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  165 bits (417), Expect = 2e-38
 Identities = 125/380 (32%), Positives = 196/380 (51%), Gaps = 24/380 (6%)
 Frame = +2

Query: 32   DWSQLPLDLLNQIMDLLTL-PDLIRFGYVCTSWQSF--STPSRHKGRLPWLIAPFKNSLP 202
            DWSQL  +LL+ I     +  D +RF  VC +W++    TP     +LPWL+ P   S P
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLP--QSQP 60

Query: 203  ENSSTWIDSLPFYSVLDNIFYNLDLPEIIDRRIC-GSSNGWLMTVHENSDIQLLHPFSRK 379
             ++       PF+S+  N F+ L LPE   RR   GSS+GWL+ + E  +I LL+P +R 
Sbjct: 61   HHTHR-----PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRS 115

Query: 380  VIDLPSLLDMPGINGMKLLNGKLQYKAKYLGRTAWEDSCL-IRDTYIAKAIISATPVP-- 550
             + LP L   P +      +   +Y  +      +  S   +RD++I K I+S++P    
Sbjct: 116  KVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS 175

Query: 551  ---LVMVSNINDELIFCRPEIDYEWKSIENGEREMFGYNDVVYCEGKFYAVLFDGSLYVV 721
                V++ N   +L  CR   D  W  +E+ +       DV++  G FYAV   GS+ V 
Sbjct: 176  DFIAVVILNQTGDLALCRKSDD-SWTFLEDAQSYA---EDVIFHRGLFYAVNKYGSIAVC 231

Query: 722  EGLEGESPVTKLLISENRMVNYGYDKLYLVESSGDLLRIIRIQD-----DESKTIVVVK- 883
            + + G SP   ++    +   +G D  YLVES  +LL + R  D     +  +T ++ + 
Sbjct: 232  D-VSGSSPRVSIIEMPQQ---FGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRT 287

Query: 884  ----IWKLNFEECKCVEVKSLGDRAIFVGVSYSYSLSASDFPGCTRNCIYFTEQPLVENR 1051
                + +L+ +  +   V SLGDRA+F+G + S SLS+ DFPGC  NCIY+T+    +N 
Sbjct: 288  TRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNY 347

Query: 1052 GG----YDICIYNLEDGTMK 1099
             G     D+ I+NLEDG+++
Sbjct: 348  DGIGGEQDLGIFNLEDGSIE 367


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  164 bits (415), Expect = 4e-38
 Identities = 125/380 (32%), Positives = 196/380 (51%), Gaps = 24/380 (6%)
 Frame = +2

Query: 32   DWSQLPLDLLNQIMDLLTL-PDLIRFGYVCTSWQSF--STPSRHKGRLPWLIAPFKNSLP 202
            DWSQL  +LL+ I     +  D +RF  VC +W++    TP     +LPWL+ P   S P
Sbjct: 3    DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLP--QSQP 60

Query: 203  ENSSTWIDSLPFYSVLDNIFYNLDLPEIIDRRIC-GSSNGWLMTVHENSDIQLLHPFSRK 379
             ++       PF+S+  N F+ L LPE   RR   GSS+GWL+ + E  +I LL+P +R 
Sbjct: 61   HHTHR-----PFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRS 115

Query: 380  VIDLPSLLDMPGINGMKLLNGKLQYKAKYLGRTAWEDSCL-IRDTYIAKAIISATPVP-- 550
             + LP L   P +      +   +Y  +      +  S   +RD++I K I+S++P    
Sbjct: 116  KVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS 175

Query: 551  ---LVMVSNINDELIFCRPEIDYEWKSIENGEREMFGYNDVVYCEGKFYAVLFDGSLYVV 721
                V++ N   +L  CR   D  W  +E+ +       DV++  G FYAV   GS+ V 
Sbjct: 176  DFIAVVILNQTGDLALCRKSDD-SWTFLEDAQSYS---EDVIFHRGLFYAVNKYGSIAVC 231

Query: 722  EGLEGESPVTKLLISENRMVNYGYDKLYLVESSGDLLRIIRIQD-----DESKTIVVVK- 883
            + + G SP   ++    +   +G D  YLVES  +LL + R  D     +  +T ++ + 
Sbjct: 232  D-VSGSSPRVSIIEMPQQ---FGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRT 287

Query: 884  ----IWKLNFEECKCVEVKSLGDRAIFVGVSYSYSLSASDFPGCTRNCIYFTEQPLVENR 1051
                + +L+ +  +   V SLGDRA+F+G + S SLS+ DFPGC  NCIY+T+    +N 
Sbjct: 288  TRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNY 347

Query: 1052 GG----YDICIYNLEDGTMK 1099
             G     D+ I+NLEDG+++
Sbjct: 348  DGIGGEQDLGIFNLEDGSIE 367


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  163 bits (412), Expect = 8e-38
 Identities = 120/386 (31%), Positives = 195/386 (50%), Gaps = 27/386 (6%)
 Frame = +2

Query: 23   MSNDWSQLPLDLLNQIMDLLTL-PDLIRFGYVCTSWQSFS---TPSRHKGRLPWLIAPFK 190
            M  DWSQLP +L+  I   LT+  D +    VC +W+ FS   TP+    +LPWL+ P  
Sbjct: 1    MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWR-FSIPKTPNHLPPQLPWLMLPQS 59

Query: 191  NSLPENSSTWIDSLPFYSVLDNIFYNLDLPEIIDR-RICGSSNGWLMTVHENSDIQLLHP 367
             S    S        F+S+  N F+ L+LPE+  R R CGSS+GWLM + +   I L++P
Sbjct: 60   QSQSNQSRR-----AFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINP 114

Query: 368  FSRKVIDLPSLLDMPGINGMKLLNGKLQYKAK-YLGRTAWEDSCLIRDTYIAKAIISATP 544
             +R  + LP L   P +      +   +Y  +  LG         +RD++I K ++S++P
Sbjct: 115  LTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSP 174

Query: 545  VP-----LVMVSNINDELIFCRPEIDYEWKSIENGEREMFGYNDVVYCEGKFYAVLFDGS 709
            +      ++ + N  D+L +CR   D  W  +EN         DV++  G FYAV   G 
Sbjct: 175  LKDNNFVVIAILNQTDDLAYCRNG-DKSWSLVENARSFC---EDVIFVNGMFYAVNKAGQ 230

Query: 710  LYVVEGLEGESPVTKLLISENRMVNYGYDKLYLVESSGDLLRIIRIQDDESK-------- 865
            + + + +  +SP    + +  +    G D  YLV S  +LL + R  D E +        
Sbjct: 231  IVICD-ISSDSPRVSFMETPRQA---GGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEP 286

Query: 866  ----TIVVVKIWKLNFEECKCVEVKSLGDRAIFVGVSYSYSLSASDFPGCTRNCIYFTEQ 1033
                  +  ++++L++   + + + +LGD+A+F+G + S SLSA+DF GC  NCIY+T+ 
Sbjct: 287  HLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDD 346

Query: 1034 PLVENR----GGYDICIYNLEDGTMK 1099
             L  N     G +D+ I+ L D T++
Sbjct: 347  YLDANYDGHFGDHDLGIFKLCDETIE 372


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
            gi|223551313|gb|EEF52799.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 402

 Score =  154 bits (390), Expect = 3e-35
 Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 27/390 (6%)
 Frame = +2

Query: 23   MSNDWSQLPLDLLNQIMDLLT-LPDLIRFGYVCTSWQSFSTPSRHKG---RLPWLIAPFK 190
            MS+ W++LP +LL  I D  T   D +    VC SWQS      H     +LP+L+ P+ 
Sbjct: 1    MSSTWAELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRPHNHLLCQLPFLLLPYY 60

Query: 191  NSLPENSSTWIDSLPFYSVLDNIFYNLDLPEIIDRRICGSSNGWLMTVHENSDIQLLHPF 370
             + P+          FY++ D+  Y L+LPE  ++R CGSS+GWL+ V ++  I LL+P 
Sbjct: 61   QNNPDRRG-------FYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPL 113

Query: 371  SRKVIDLPSLLDMPGINGMKLLNGKLQYKAKYLGRTAWEDSCLIRDTYIAKAIISATP-- 544
            +R+ I+LP+L          +          ++ R  +     IRDT+I KAI+S+ P  
Sbjct: 114  TRERIELPALSTFSIFPTDVVFENSRNLNENFIMREKFH----IRDTFIVKAILSSDPSL 169

Query: 545  ---VPLVMVSNINDELIFCRPEIDYEWKSIENGEREMFGYNDVVYCEGKFYAVLFDGSLY 715
                  V++  +N+ L FCR   D  W  I+        Y D ++  GK +AV   G + 
Sbjct: 170  DTNFMAVVIYGVNENLAFCRSG-DAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGGI- 227

Query: 716  VVEGLEGESPVTKLLISENRMVNY----------GYDKLYLVESSGDLLRII----RIQD 853
                         +L  EN M+ +          GY + YL   S + L I+    ++  
Sbjct: 228  ------------SILTEENTMIRFADPPLVSSRTGYKQWYLASYSEEELLIVCRYRKVVP 275

Query: 854  DESKTIVVVKIWKLNFEECKCVEVKSLGDRAIFVGVSYSYSLSASDFPGCTRNCIYFTEQ 1033
            D        +I+KL+    K  + +SLGD+ +F+G + S S+SA D+  C  NCIYFT+ 
Sbjct: 276  DYEYKTERFEIYKLDDGGWK--KKESLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDD 333

Query: 1034 PLVENRG----GYDICIYNLEDGTMKTVYL 1111
             +   +     G+D  IY++EDG ++++ L
Sbjct: 334  YIRLCKDYVWEGHDYGIYDIEDGNIRSLGL 363


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  151 bits (382), Expect = 2e-34
 Identities = 115/382 (30%), Positives = 190/382 (49%), Gaps = 23/382 (6%)
 Frame = +2

Query: 23   MSNDWSQLPLDLLNQIMDLLTL-PDLIRFGYVCTSWQSF--STPSRHKGRLPWLIAPFKN 193
            M+ DW+QLP +L+  I   +T+  D + F  VC +W+S    TP+    +LPWL+     
Sbjct: 1    MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLL----- 55

Query: 194  SLPENSSTWIDSLPFYSVLDNIFYNLDLPEIIDRRI-CGSSNGWLMTVHENSDIQLLHPF 370
             LP++ S       F+++    F++L+LPE   R+  CGSS+GWL+ + ++  I +++P 
Sbjct: 56   -LPQSQSNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPL 114

Query: 371  SRKVIDLPSLLDMPGINGMKLLN-GKLQYKAKYLGRTAWEDSCLIRDTYIAKAIISATP- 544
            +R+ I LP++   P +      N G+        G         +RD +I K ++S++P 
Sbjct: 115  TRRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPL 174

Query: 545  -------VPLVMVSNINDELIFCRPEIDYEWKSIENGEREMFGYNDVVYCEGKFYAVLFD 703
                   V + ++ +  D L +C+   D  W  +EN         DV+Y  G FYAV   
Sbjct: 175  EKKGDFFVAMAILCSTGD-LAYCKNG-DECWNIVENSRSFS---EDVIYFNGLFYAVNKA 229

Query: 704  GSLYVVEGLEGESPVTKLLISENRMVNYGYDKLYLVESSGDLLRIIRIQD-DESKTIVVV 880
            G + V + + G SP    + +  ++   G D  YLV S   LL + R  D D    I + 
Sbjct: 230  GQIVVCD-VNGNSPKVSFIETPRQI---GGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIY 285

Query: 881  K-----IWKLNFEECKCVEVKSLGDRAIFVGVSYSYSLSASDFPGCTRNCIYFTEQPLVE 1045
            K     ++KL+    +   V SLGD  +F+G + S +LSAS   GC  +CIY+T+     
Sbjct: 286  KTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSAN 345

Query: 1046 NRGG----YDICIYNLEDGTMK 1099
            N  G    +D+ I+ L DG+++
Sbjct: 346  NYDGHIGEHDLGIFKLSDGSIE 367