BLASTX nr result
ID: Coptis23_contig00005033
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005033 (561 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29284.3| unnamed protein product [Vitis vinifera] 96 3e-18 emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] 90 3e-16 ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2... 85 9e-15 gb|ABK25914.1| unknown [Picea sitchensis] 66 4e-09 ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496... 64 1e-08 >emb|CBI29284.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 96.3 bits (238), Expect = 3e-18 Identities = 47/64 (73%), Positives = 54/64 (84%) Frame = -1 Query: 225 MAVLDQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 46 M L+ TVQVLD+SPKVTL DLN FFSYCGTV+ I L RK DQ+QLA+VTF+QP+A QTA Sbjct: 1 MGTLNLTVQVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTA 60 Query: 45 LLLN 34 LLLN Sbjct: 61 LLLN 64 >emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera] Length = 212 Score = 89.7 bits (221), Expect = 3e-16 Identities = 43/56 (76%), Positives = 49/56 (87%) Frame = -1 Query: 201 QVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 34 QVLD+SPKVTL DLN FFSYCGTV+ I L RK DQ+QLA+VTF+QP+A QTALLLN Sbjct: 28 QVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTALLLN 83 >ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1| predicted protein [Populus trichocarpa] Length = 187 Score = 84.7 bits (208), Expect = 9e-15 Identities = 42/64 (65%), Positives = 51/64 (79%) Frame = -1 Query: 225 MAVLDQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 46 MA D T+QVL+LSP VT +LN+FFSYCGTVEKI L++ +DQ Q A VTF QP+A QTA Sbjct: 1 MAQSDLTIQVLNLSPSVTRAELNTFFSYCGTVEKIELQKDKDQMQSALVTFTQPYAFQTA 60 Query: 45 LLLN 34 LLL+ Sbjct: 61 LLLS 64 >gb|ABK25914.1| unknown [Picea sitchensis] Length = 215 Score = 65.9 bits (159), Expect = 4e-09 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = -1 Query: 213 DQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLL 37 D TVQV +LS K T+ D+ FFSY GT++K LER Q+A+VTF++P+A +TA+LL Sbjct: 3 DYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLL 61 >ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496192|gb|AES77395.1| Protein vip1 [Medicago truncatula] gi|388503878|gb|AFK40005.1| unknown [Medicago truncatula] Length = 255 Score = 64.3 bits (155), Expect = 1e-08 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = -1 Query: 207 TVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLNVS 28 T ++ +L+P+ T D+ +FF YCG +E++ + R D AYVTFR +AL+TALLLN S Sbjct: 7 TAEITNLTPRATENDVQNFFGYCGVIERVDVIRSSDYESTAYVTFRDAYALETALLLNGS 66