BLASTX nr result

ID: Coptis23_contig00005033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005033
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29284.3| unnamed protein product [Vitis vinifera]               96   3e-18
emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]    90   3e-16
ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2...    85   9e-15
gb|ABK25914.1| unknown [Picea sitchensis]                              66   4e-09
ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496...    64   1e-08

>emb|CBI29284.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -1

Query: 225 MAVLDQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 46
           M  L+ TVQVLD+SPKVTL DLN FFSYCGTV+ I L RK DQ+QLA+VTF+QP+A QTA
Sbjct: 1   MGTLNLTVQVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTA 60

Query: 45  LLLN 34
           LLLN
Sbjct: 61  LLLN 64


>emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]
          Length = 212

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -1

Query: 201 QVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLN 34
           QVLD+SPKVTL DLN FFSYCGTV+ I L RK DQ+QLA+VTF+QP+A QTALLLN
Sbjct: 28  QVLDISPKVTLSDLNIFFSYCGTVDNIQLCRKNDQTQLAFVTFKQPYAFQTALLLN 83


>ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = -1

Query: 225 MAVLDQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTA 46
           MA  D T+QVL+LSP VT  +LN+FFSYCGTVEKI L++ +DQ Q A VTF QP+A QTA
Sbjct: 1   MAQSDLTIQVLNLSPSVTRAELNTFFSYCGTVEKIELQKDKDQMQSALVTFTQPYAFQTA 60

Query: 45  LLLN 34
           LLL+
Sbjct: 61  LLLS 64


>gb|ABK25914.1| unknown [Picea sitchensis]
          Length = 215

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = -1

Query: 213 DQTVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLL 37
           D TVQV +LS K T+ D+  FFSY GT++K  LER     Q+A+VTF++P+A +TA+LL
Sbjct: 3   DYTVQVCNLSTKATVKDVKQFFSYSGTIKKAKLERSGQWEQVAFVTFKEPYASETAVLL 61


>ref|XP_003621177.1| Protein vip1 [Medicago truncatula] gi|355496192|gb|AES77395.1|
           Protein vip1 [Medicago truncatula]
           gi|388503878|gb|AFK40005.1| unknown [Medicago
           truncatula]
          Length = 255

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -1

Query: 207 TVQVLDLSPKVTLGDLNSFFSYCGTVEKILLERKEDQSQLAYVTFRQPFALQTALLLNVS 28
           T ++ +L+P+ T  D+ +FF YCG +E++ + R  D    AYVTFR  +AL+TALLLN S
Sbjct: 7   TAEITNLTPRATENDVQNFFGYCGVIERVDVIRSSDYESTAYVTFRDAYALETALLLNGS 66


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