BLASTX nr result

ID: Coptis23_contig00005030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005030
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319503.1| predicted protein [Populus trichocarpa] gi|1...   315   7e-84
emb|CBI39540.3| unnamed protein product [Vitis vinifera]              314   2e-83
emb|CAN65684.1| hypothetical protein VITISV_022458 [Vitis vinifera]   314   2e-83
ref|XP_002330175.1| predicted protein [Populus trichocarpa] gi|1...   313   3e-83
ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534....   313   4e-83

>ref|XP_002319503.1| predicted protein [Populus trichocarpa] gi|118483047|gb|ABK93433.1|
           unknown [Populus trichocarpa]
           gi|222857879|gb|EEE95426.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  315 bits (808), Expect = 7e-84
 Identities = 156/176 (88%), Positives = 164/176 (93%)
 Frame = -2

Query: 821 SSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXXXXXXX 642
           SS+E+S QNQVKASVQRKIRQSIA+EYPGLEPVL+DLLPKKSPLIV KCQNH        
Sbjct: 6   SSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNLVVVNN 65

Query: 641 VPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGGALDDE 462
           VPLFFNIRDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVL+GANIMCPGLTSPGGALDDE
Sbjct: 66  VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDE 125

Query: 461 VLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERMD 294
           V  ETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMER+D
Sbjct: 126 VDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERLD 181


>emb|CBI39540.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score =  314 bits (804), Expect = 2e-83
 Identities = 153/176 (86%), Positives = 164/176 (93%)
 Frame = -2

Query: 821 SSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXXXXXXX 642
           SSE++S QNQVKASVQRKIRQSIA+EYPGLEPVL+DLLPKKSPLIVAKCQNH        
Sbjct: 6   SSEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVLVNN 65

Query: 641 VPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGGALDDE 462
           VPLFFN+RDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVLAGANIMCPGLTSPGG LDD+
Sbjct: 66  VPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDD 125

Query: 461 VLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERMD 294
           V EE+PVAIMAEGKQHALAIGFTKMSAKDI+ INKGIGVDNMHYLNDGLWKMER+D
Sbjct: 126 VAEESPVAIMAEGKQHALAIGFTKMSAKDIRAINKGIGVDNMHYLNDGLWKMERLD 181


>emb|CAN65684.1| hypothetical protein VITISV_022458 [Vitis vinifera]
          Length = 194

 Score =  314 bits (804), Expect = 2e-83
 Identities = 153/176 (86%), Positives = 164/176 (93%)
 Frame = -2

Query: 821 SSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXXXXXXX 642
           SSE++S QNQVKASVQRKIRQSIA+EYPGLEPVL+DLLPKKSPLIVAKCQNH        
Sbjct: 19  SSEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVLVNN 78

Query: 641 VPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGGALDDE 462
           VPLFFN+RDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVLAGANIMCPGLTSPGG LDD+
Sbjct: 79  VPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDD 138

Query: 461 VLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERMD 294
           V EE+PVAIMAEGKQHALAIGFTKMSAKDI+ INKGIGVDNMHYLNDGLWKMER+D
Sbjct: 139 VAEESPVAIMAEGKQHALAIGFTKMSAKDIRAINKGIGVDNMHYLNDGLWKMERLD 194


>ref|XP_002330175.1| predicted protein [Populus trichocarpa] gi|118484569|gb|ABK94158.1|
           unknown [Populus trichocarpa]
           gi|222871631|gb|EEF08762.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  313 bits (803), Expect = 3e-83
 Identities = 155/176 (88%), Positives = 163/176 (92%)
 Frame = -2

Query: 821 SSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXXXXXXX 642
           SS+E+S QNQVKASVQRKIRQSIA+EYPGLEPVL+D LPKKSPLIV KCQNH        
Sbjct: 6   SSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDFLPKKSPLIVVKCQNHLNLVVVNN 65

Query: 641 VPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGGALDDE 462
           VPLFFNIRDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVLAGANIMCPGLTSPGGALDDE
Sbjct: 66  VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDE 125

Query: 461 VLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERMD 294
           V  ETPVAIMAEGKQHALAIGFTKMSAKDIK+INKGIGVDNMHYLNDGLWKMER+D
Sbjct: 126 VDAETPVAIMAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWKMERLD 181


>ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534.1| ligatin [Zea mays]
           gi|223945305|gb|ACN26736.1| unknown [Zea mays]
           gi|413947931|gb|AFW80580.1| ligatin [Zea mays]
          Length = 181

 Score =  313 bits (802), Expect = 4e-83
 Identities = 153/176 (86%), Positives = 164/176 (93%)
 Frame = -2

Query: 821 SSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXXXXXXX 642
           SSE+ISGQNQVKASVQRKIRQSIA+EYP LEP+L+DLLPKKSP+IV KCQNH        
Sbjct: 6   SSEDISGQNQVKASVQRKIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNLVVVNN 65

Query: 641 VPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGGALDDE 462
           VPLFFNIRDGPYMPTLRLLHQYPDIMKK +VDRGAIKFVL+GANIMCPGLTSPGGALDDE
Sbjct: 66  VPLFFNIRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLSGANIMCPGLTSPGGALDDE 125

Query: 461 VLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERMD 294
           V EETPVAIMAEGKQHALAIG+TKMSAKDI+TINKGIGVDNMHYLNDGLWKMER++
Sbjct: 126 VEEETPVAIMAEGKQHALAIGYTKMSAKDIRTINKGIGVDNMHYLNDGLWKMERLE 181


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