BLASTX nr result
ID: Coptis23_contig00005014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005014
(1190 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2... 504 e-140
ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2... 498 e-138
ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2... 497 e-138
ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|2... 496 e-138
ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin... 487 e-135
>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
vinifera] gi|147860391|emb|CAN82570.1| hypothetical
protein VITISV_016117 [Vitis vinifera]
gi|296090220|emb|CBI40039.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 504 bits (1298), Expect = e-140
Identities = 235/308 (76%), Positives = 267/308 (86%), Gaps = 1/308 (0%)
Frame = -3
Query: 1116 VEKHVKYILALEK-KDDIESVLMEHLKMSGAYWXXXXXXXXXXXXTVDRDEVVSWVLQCQ 940
VEKHV+YIL++EK KD+ ESV+MEHL+M+GAYW VD DE++SWV++CQ
Sbjct: 10 VEKHVQYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDEIISWVMECQ 69
Query: 939 HESGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLDYENVSDYVAGLQKEDGSFAGDMWG 760
HESGGF GNVGHDPH+LYTLSAVQ+LAL KL+VLD + VS+Y+AGLQ EDGSF+GDMWG
Sbjct: 70 HESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVLDIDKVSNYIAGLQNEDGSFSGDMWG 129
Query: 759 EIDSRFSYIAICCLSILHRLDKINVGKAVDYILSCKNLDGGFGCTPGAESHSGQIFCCVA 580
EID+RFSYIAIC LS+L RLDKINV KAV+YI+SCKNLDGGFGCTPGAESH+GQIFCCV+
Sbjct: 130 EIDTRFSYIAICSLSLLQRLDKINVEKAVNYIVSCKNLDGGFGCTPGAESHAGQIFCCVS 189
Query: 579 ALALTGSLHHVDKDLLGWWLCERQDKSGGLNGRPMKDPDVCYSWWVLSSLTIIDRVDWID 400
ALALTGSLHHVDKDLLGWWLCERQ KSG LNGRP K PDVCYSWWVLSSL +IDR WID
Sbjct: 190 ALALTGSLHHVDKDLLGWWLCERQVKSGALNGRPEKLPDVCYSWWVLSSLIMIDRAHWID 249
Query: 399 KNELARFIIDCQDKENGGISDRPNFAVDVFHTYFGVGGLSLLEYPGLKTIDPAYALPVDA 220
K +L +FI+DCQDKENGGISDRP+ AVDVFHTYFGV GL+ LEYPGLK +DPAYALPVD
Sbjct: 250 KEKLIKFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLAHLEYPGLKAVDPAYALPVDV 309
Query: 219 VNNIFFGK 196
VN IFF +
Sbjct: 310 VNRIFFSR 317
Score = 74.3 bits (181), Expect = 6e-11
Identities = 38/168 (22%), Positives = 84/168 (50%)
Frame = -3
Query: 852 GKLDVLDYENVSDYVAGLQKEDGSFAGDMWGEIDSRFSYIAICCLSILHRLDKINVGKAV 673
G++ L+ E Y+ ++K +F + + +Y + L +L +LD ++ + +
Sbjct: 3 GQIGDLEVEKHVQYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDEII 62
Query: 672 DYILSCKNLDGGFGCTPGAESHSGQIFCCVAALALTGSLHHVDKDLLGWWLCERQDKSGG 493
+++ C++ GGFG G + H V LAL L+ +D D + ++ Q++ G
Sbjct: 63 SWVMECQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVLDIDKVSNYIAGLQNEDGS 122
Query: 492 LNGRPMKDPDVCYSWWVLSSLTIIDRVDWIDKNELARFIIDCQDKENG 349
+G + D +S+ + SL+++ R+D I+ + +I+ C++ + G
Sbjct: 123 FSGDMWGEIDTRFSYIAICSLSLLQRLDKINVEKAVNYIVSCKNLDGG 170
>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
vinifera] gi|147821440|emb|CAN74579.1| hypothetical
protein VITISV_024797 [Vitis vinifera]
gi|296081232|emb|CBI17976.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 498 bits (1281), Expect = e-138
Identities = 231/307 (75%), Positives = 265/307 (86%), Gaps = 1/307 (0%)
Frame = -3
Query: 1113 EKHVKYILALEK-KDDIESVLMEHLKMSGAYWXXXXXXXXXXXXTVDRDEVVSWVLQCQH 937
EKHV+YIL +EK KDD ESV+ EHL+M+GAYW VD+DEVVSWV++CQH
Sbjct: 11 EKHVQYILLVEKRKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVVSWVMECQH 70
Query: 936 ESGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLDYENVSDYVAGLQKEDGSFAGDMWGE 757
ESGGF GN+GHDPH+++TLSAVQ+LAL KL+VLD + +++Y+AGLQ DGSF+GDMWGE
Sbjct: 71 ESGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITNYIAGLQNVDGSFSGDMWGE 130
Query: 756 IDSRFSYIAICCLSILHRLDKINVGKAVDYILSCKNLDGGFGCTPGAESHSGQIFCCVAA 577
ID+RFSYIAICCLS+L LDKINV KAV+YI+SCKNLDGGFGCTPGAESH+GQIFCCV A
Sbjct: 131 IDTRFSYIAICCLSLLQCLDKINVEKAVNYIVSCKNLDGGFGCTPGAESHAGQIFCCVGA 190
Query: 576 LALTGSLHHVDKDLLGWWLCERQDKSGGLNGRPMKDPDVCYSWWVLSSLTIIDRVDWIDK 397
LALTGSLHHVDKDLLGWWLCERQ KSGGLNGRP K PDVCYSWWVLSSL +IDR WIDK
Sbjct: 191 LALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRAHWIDK 250
Query: 396 NELARFIIDCQDKENGGISDRPNFAVDVFHTYFGVGGLSLLEYPGLKTIDPAYALPVDAV 217
++L +FIIDCQD+ENGGISDRP+ AVDVFHTYFGV GLSLLEYPG+K +DPAYALPV V
Sbjct: 251 DKLIKFIIDCQDRENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKAVDPAYALPVHVV 310
Query: 216 NNIFFGK 196
N IFF +
Sbjct: 311 NRIFFSR 317
Score = 67.4 bits (163), Expect = 7e-09
Identities = 43/192 (22%), Positives = 88/192 (45%)
Frame = -3
Query: 852 GKLDVLDYENVSDYVAGLQKEDGSFAGDMWGEIDSRFSYIAICCLSILHRLDKINVGKAV 673
GK+ L+ E Y+ ++K F + + +Y + L +L +L+ ++ + V
Sbjct: 3 GKIGELEAEKHVQYILLVEKRKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVV 62
Query: 672 DYILSCKNLDGGFGCTPGAESHSGQIFCCVAALALTGSLHHVDKDLLGWWLCERQDKSGG 493
+++ C++ GGFG G + H V LAL L+ +D D + ++ Q+ G
Sbjct: 63 SWVMECQHESGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITNYIAGLQNVDGS 122
Query: 492 LNGRPMKDPDVCYSWWVLSSLTIIDRVDWIDKNELARFIIDCQDKENGGISDRPNFAVDV 313
+G + D +S+ + L+++ +D I+ + +I+ C++ + GG P
Sbjct: 123 FSGDMWGEIDTRFSYIAICCLSLLQCLDKINVEKAVNYIVSCKNLD-GGFGCTPGAESHA 181
Query: 312 FHTYFGVGGLSL 277
+ VG L+L
Sbjct: 182 GQIFCCVGALAL 193
>ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
[Cucumis sativus] gi|449490992|ref|XP_004158768.1|
PREDICTED: geranylgeranyl transferase type-2 subunit
beta-like [Cucumis sativus]
Length = 317
Score = 497 bits (1280), Expect = e-138
Identities = 233/307 (75%), Positives = 264/307 (85%), Gaps = 1/307 (0%)
Frame = -3
Query: 1113 EKHVKYILALEKK-DDIESVLMEHLKMSGAYWXXXXXXXXXXXXTVDRDEVVSWVLQCQH 937
EKHV+YIL++EKK DD +SV+MEHL+M+GAYW TVD DEVVSWV+ CQH
Sbjct: 7 EKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMSCQH 66
Query: 936 ESGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLDYENVSDYVAGLQKEDGSFAGDMWGE 757
ESGGF+GNVGHDPH+LYTLSAVQ+LAL KLDVLD + V++YV GLQ EDGSF+GD+WGE
Sbjct: 67 ESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFSGDIWGE 126
Query: 756 IDSRFSYIAICCLSILHRLDKINVGKAVDYILSCKNLDGGFGCTPGAESHSGQIFCCVAA 577
+DSRFSYIAI CLS+LH+LDKINV KAV++++SCKN+DGGFGCTPG ESHSGQIFCCV A
Sbjct: 127 VDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQIFCCVGA 186
Query: 576 LALTGSLHHVDKDLLGWWLCERQDKSGGLNGRPMKDPDVCYSWWVLSSLTIIDRVDWIDK 397
LALTGSLHHVDKDLLGWWLCERQ KSGGLNGRP K PDVCYSWWVLSSL +IDRV WI K
Sbjct: 187 LALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWISK 246
Query: 396 NELARFIIDCQDKENGGISDRPNFAVDVFHTYFGVGGLSLLEYPGLKTIDPAYALPVDAV 217
+L +FI+DCQD ENGGISDRP+ AVDV+HTYFG+ GLSLLEYP LK IDPAYALPVD V
Sbjct: 247 EKLIKFILDCQDTENGGISDRPDDAVDVYHTYFGIAGLSLLEYPSLKPIDPAYALPVDVV 306
Query: 216 NNIFFGK 196
N I GK
Sbjct: 307 NRIRLGK 313
>ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|222857877|gb|EEE95424.1|
predicted protein [Populus trichocarpa]
Length = 313
Score = 496 bits (1278), Expect = e-138
Identities = 228/308 (74%), Positives = 267/308 (86%), Gaps = 1/308 (0%)
Frame = -3
Query: 1116 VEKHVKYILALEK-KDDIESVLMEHLKMSGAYWXXXXXXXXXXXXTVDRDEVVSWVLQCQ 940
V+KHVKYIL++EK KD ESV++EHL+M+GAYW +D +EV+ W+++CQ
Sbjct: 6 VDKHVKYILSVEKRKDSFESVVLEHLRMNGAYWGLATLDLLGKLDALDSNEVIEWIMKCQ 65
Query: 939 HESGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLDYENVSDYVAGLQKEDGSFAGDMWG 760
HESGGFAGN+GHDPH+LYTLSAVQ+LAL KL+VLD + V++Y++GLQ EDGSF+GD WG
Sbjct: 66 HESGGFAGNIGHDPHMLYTLSAVQVLALFDKLNVLDADKVANYISGLQNEDGSFSGDEWG 125
Query: 759 EIDSRFSYIAICCLSILHRLDKINVGKAVDYILSCKNLDGGFGCTPGAESHSGQIFCCVA 580
E+DSRFSY+AICCLSILHRLDKINV KAV+YI SCKN+DGGFGCTPG ESH+GQIFCCV
Sbjct: 126 EVDSRFSYLAICCLSILHRLDKINVEKAVNYIASCKNVDGGFGCTPGGESHAGQIFCCVG 185
Query: 579 ALALTGSLHHVDKDLLGWWLCERQDKSGGLNGRPMKDPDVCYSWWVLSSLTIIDRVDWID 400
ALA+TGSLHHVDKDLLGWWLCERQ KSGGLNGRP K PDVCYSWWVLSSL +IDRV WI+
Sbjct: 186 ALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIN 245
Query: 399 KNELARFIIDCQDKENGGISDRPNFAVDVFHTYFGVGGLSLLEYPGLKTIDPAYALPVDA 220
K++L +FI++CQD ENGGISDRP+ AVDV+HTYFGV GLSLLEYPGLK IDPA+ALPVD
Sbjct: 246 KDKLVKFILNCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAHALPVDV 305
Query: 219 VNNIFFGK 196
VN IFF K
Sbjct: 306 VNRIFFQK 313
>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
gi|255635594|gb|ACU18147.1| unknown [Glycine max]
Length = 317
Score = 487 bits (1254), Expect = e-135
Identities = 228/307 (74%), Positives = 259/307 (84%), Gaps = 1/307 (0%)
Frame = -3
Query: 1113 EKHVKYILALEK-KDDIESVLMEHLKMSGAYWXXXXXXXXXXXXTVDRDEVVSWVLQCQH 937
EKHV+YIL++EK KD+ ESV+MEHL+M+GAYW +VD DEVVSW++ CQH
Sbjct: 7 EKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSWLMSCQH 66
Query: 936 ESGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLDYENVSDYVAGLQKEDGSFAGDMWGE 757
ESGGF GNVGHDPH+LYTLSAVQ+LAL KL+V+D + V+ Y+ LQ EDGSF+GDMWGE
Sbjct: 67 ESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFSGDMWGE 126
Query: 756 IDSRFSYIAICCLSILHRLDKINVGKAVDYILSCKNLDGGFGCTPGAESHSGQIFCCVAA 577
+D+RFSYI ICCLSILH LDKINV KAV YI+SCKN+DGGFGCTPG ESH+GQIFCCV A
Sbjct: 127 VDTRFSYIVICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQIFCCVGA 186
Query: 576 LALTGSLHHVDKDLLGWWLCERQDKSGGLNGRPMKDPDVCYSWWVLSSLTIIDRVDWIDK 397
LA+TGSL VDKDLLGWWLCERQ KSGGLNGRP K PDVCYSWWVLSSL +IDRV WI K
Sbjct: 187 LAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWISK 246
Query: 396 NELARFIIDCQDKENGGISDRPNFAVDVFHTYFGVGGLSLLEYPGLKTIDPAYALPVDAV 217
+L +FI+DCQD ENGGISDRP+ AVDVFHT+FGV GLSLLEYPGLK +DPAYALPVD V
Sbjct: 247 EKLIKFILDCQDTENGGISDRPDDAVDVFHTFFGVAGLSLLEYPGLKPVDPAYALPVDVV 306
Query: 216 NNIFFGK 196
N IFF K
Sbjct: 307 NRIFFTK 313