BLASTX nr result

ID: Coptis23_contig00005007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005007
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146076.1| PREDICTED: uncharacterized protein LOC101219...   214   3e-53
ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260...   208   2e-51
emb|CAN73055.1| hypothetical protein VITISV_007595 [Vitis vinifera]   208   2e-51
ref|XP_003545700.1| PREDICTED: uncharacterized protein LOC100803...   207   5e-51
emb|CBI20091.3| unnamed protein product [Vitis vinifera]              206   9e-51

>ref|XP_004146076.1| PREDICTED: uncharacterized protein LOC101219900 [Cucumis sativus]
            gi|449503660|ref|XP_004162113.1| PREDICTED:
            uncharacterized LOC101219900 [Cucumis sativus]
          Length = 744

 Score =  214 bits (546), Expect = 3e-53
 Identities = 97/149 (65%), Positives = 121/149 (81%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3    RCLINQDFELLHRLAGCQEYITREIFDRMWCWLYPVAFTLSRKWINAIWGCVSPMWIEGL 182
            R L  QDFELL R++GCQEY+ +E F+RMWCWLYPVAFTLSR+WINA+W  +SP WIEG 
Sbjct: 557  RSLTQQDFELLRRISGCQEYLAQENFERMWCWLYPVAFTLSRQWINAMWSSLSPKWIEGF 616

Query: 183  ITKEQAEFSLRGLRGIHEPGTFIPRFPTSRSWPHPDAGSLIVTYVGPDYYIHHRLLSVD- 359
            ITKE+AE SL+   G+ +PGTFI RFPTSRSWPHPDAGSL+VTYVG DY +HHRLL++D 
Sbjct: 617  ITKEEAELSLQSPAGLQDPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYALHHRLLTLDR 676

Query: 360  ---YSDREVNAKSLQELIMEEPHLTRLGR 437
                ++ E N +SLQ++++ EP L+RLGR
Sbjct: 677  IFSSTEGEKNMRSLQDMLLAEPELSRLGR 705


>ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260583 [Vitis vinifera]
          Length = 683

 Score =  208 bits (530), Expect = 2e-51
 Identities = 97/149 (65%), Positives = 118/149 (79%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3   RCLINQDFELLHRLAGCQEYITREIFDRMWCWLYPVAFTLSRKWINAIWGCVSPMWIEGL 182
           R L ++D ELL R++GCQEY+ RE FD+MW WLYPVAFTLSR WINA W   SP WIEG 
Sbjct: 493 RSLTHEDLELLRRISGCQEYLDRENFDKMWYWLYPVAFTLSRDWINATWCSASPKWIEGF 552

Query: 183 ITKEQAEFSLRGLRGIHEPGTFIPRFPTSRSWPHPDAGSLIVTYVGPDYYIHHRLLSVD- 359
           +TKE+AE SL+G RG+ +PGTFI RFPTSRSWPHPDAGSLIVTY+G DY +HHR+LS+D 
Sbjct: 553 VTKEEAESSLQGPRGLQQPGTFILRFPTSRSWPHPDAGSLIVTYIGSDYNLHHRMLSLDN 612

Query: 360 -YSDREV--NAKSLQELIMEEPHLTRLGR 437
            YS  E   N K L+++++ EP L+RLGR
Sbjct: 613 IYSSDETVRNMKPLEDMLLAEPELSRLGR 641


>emb|CAN73055.1| hypothetical protein VITISV_007595 [Vitis vinifera]
          Length = 747

 Score =  208 bits (530), Expect = 2e-51
 Identities = 97/149 (65%), Positives = 118/149 (79%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3    RCLINQDFELLHRLAGCQEYITREIFDRMWCWLYPVAFTLSRKWINAIWGCVSPMWIEGL 182
            R L ++D ELL R++GCQEY+ RE FD+MW WLYPVAFTLSR WINA W   SP WIEG 
Sbjct: 562  RSLTHEDLELLRRISGCQEYLDRENFDKMWYWLYPVAFTLSRDWINATWCSASPKWIEGF 621

Query: 183  ITKEQAEFSLRGLRGIHEPGTFIPRFPTSRSWPHPDAGSLIVTYVGPDYYIHHRLLSVD- 359
            +TKE+AE SL+G RG+ +PGTFI RFPTSRSWPHPDAGSLIVTY+G DY +HHR+LS+D 
Sbjct: 622  VTKEEAESSLQGPRGLQQPGTFILRFPTSRSWPHPDAGSLIVTYIGSDYNLHHRMLSLDN 681

Query: 360  -YSDREV--NAKSLQELIMEEPHLTRLGR 437
             YS  E   N K L+++++ EP L+RLGR
Sbjct: 682  IYSSDETVRNMKPLEDMLLAEPELSRLGR 710


>ref|XP_003545700.1| PREDICTED: uncharacterized protein LOC100803169 [Glycine max]
          Length = 704

 Score =  207 bits (527), Expect = 5e-51
 Identities = 94/150 (62%), Positives = 115/150 (76%), Gaps = 5/150 (3%)
 Frame = +3

Query: 3    RCLINQDFELLHRLAGCQEYITREIFDRMWCWLYPVAFTLSRKWINAIWGCVSPMWIEGL 182
            R L  QD  LL R+AGCQEY+T+E F+++WCWLYPVAF +SR WIN IW   SP WIEG 
Sbjct: 555  RSLSPQDLNLLRRIAGCQEYLTQENFEKLWCWLYPVAFIISRDWINPIWNSTSPKWIEGF 614

Query: 183  ITKEQAEFSLRGLRGIHEPGTFIPRFPTSRSWPHPDAGSLIVTYVGPDYYIHHRLLSVDY 362
            ITKE+AE SL+G  G  EPGTFI RFPTSRSWPHPDAG+L+V+YVG DY +HHRLLS+D+
Sbjct: 615  ITKEEAESSLQGPTGFQEPGTFILRFPTSRSWPHPDAGNLVVSYVGNDYKLHHRLLSIDH 674

Query: 363  -----SDREVNAKSLQELIMEEPHLTRLGR 437
                  D  V+ K LQ++++ EP L+RLGR
Sbjct: 675  ISCSSGDNRVDVKPLQDMLLAEPELSRLGR 704


>emb|CBI20091.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  206 bits (525), Expect = 9e-51
 Identities = 96/148 (64%), Positives = 117/148 (79%), Gaps = 4/148 (2%)
 Frame = +3

Query: 3   RCLINQDFELLHRLAGCQEYITREIFDRMWCWLYPVAFTLSRKWINAIWGCVSPMWIEGL 182
           R L ++D ELL R++GCQEY+ RE FD+MW WLYPVAFTLSR WINA W   SP WIEG 
Sbjct: 498 RSLTHEDLELLRRISGCQEYLDRENFDKMWYWLYPVAFTLSRDWINATWCSASPKWIEGF 557

Query: 183 ITKEQAEFSLRGLRGIHEPGTFIPRFPTSRSWPHPDAGSLIVTYVGPDYYIHHRLLSVD- 359
           +TKE+AE SL+G RG+ +PGTFI RFPTSRSWPHPDAGSLIVTY+G DY +HHR+LS+D 
Sbjct: 558 VTKEEAESSLQGPRGLQQPGTFILRFPTSRSWPHPDAGSLIVTYIGSDYNLHHRMLSLDN 617

Query: 360 -YSDREV--NAKSLQELIMEEPHLTRLG 434
            YS  E   N K L+++++ EP L+RLG
Sbjct: 618 IYSSDETVRNMKPLEDMLLAEPELSRLG 645


Top