BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005000
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus ...   501   e-139
ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|2...   495   e-137
ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 ...   494   e-137
ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...   483   e-134

>ref|XP_002523067.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223537629|gb|EEF39252.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 330

 Score =  501 bits (1289), Expect = e-139
 Identities = 243/327 (74%), Positives = 278/327 (85%), Gaps = 4/327 (1%)
 Frame = +2

Query: 176  TYQEYMHEHHQNELPGVGFKNLKKILKKCRSHLQSQDLENTNGGVPENSSSSCPHQCPVC 355
            TYQEYM ++ + ELPG+GFK LKKILKKCR  L+S    + NG  P      CPH CPVC
Sbjct: 6    TYQEYM-QNQEKELPGLGFKKLKKILKKCRKDLESHQQLDNNGS-PSAHVQHCPHHCPVC 63

Query: 356  DGTFFSSLLNEMSAIVGCFNERAQKLLDLHLASGFRKYVVWFRSKQRKDHGDLIQEGKDL 535
            DGTFF SLLNEMSAIVGCFNERAQKLL+LHLASG RKY +WF+ K + +H  L+QEGKDL
Sbjct: 64   DGTFFPSLLNEMSAIVGCFNERAQKLLELHLASGVRKYFMWFKGKLKGNHVALMQEGKDL 123

Query: 536  VTYAMINAIAIRKILKKYDKVHYCKQGQVFKSQAQSLHIEILQSPWLCELIAFHINLRET 715
            VTYA+IN+IA+RKILKKYDK+HY  QGQ F+SQAQS+HIEILQSPWLCEL+AFHINLRET
Sbjct: 124  VTYALINSIAVRKILKKYDKIHYSNQGQAFRSQAQSMHIEILQSPWLCELMAFHINLRET 183

Query: 716  KART---ISGLFEGFSLKLEDE-KPLLSCSLFDSIKLDIELTCSICLDTVFDPVSLTCGH 883
            K ++   +  LF+G SL  +D+ KP LSC LFDS+KLDI+LTCSICLDTVFDPVSLTCGH
Sbjct: 184  KIKSRTKVPALFDGCSLTFDDDDKPSLSCELFDSVKLDIDLTCSICLDTVFDPVSLTCGH 243

Query: 884  IFCYMCACSSASVTIVDGLKSALPRAKCPLCREAAVYEGAVHLEELNILLSRSCREYWKE 1063
            IFCYMCACS+ASVTIVDGL++A P+ KCPLCREA V EGAVHLEELNILLSRSC EYW++
Sbjct: 244  IFCYMCACSAASVTIVDGLRAAEPKEKCPLCREAGVNEGAVHLEELNILLSRSCPEYWEQ 303

Query: 1064 RLQSERVERIKQAKEHWESQCRAFIGV 1144
            RLQSERVERI+QAKEHWE QCRAF+GV
Sbjct: 304  RLQSERVERIRQAKEHWEFQCRAFMGV 330


>ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|222861120|gb|EEE98662.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  495 bits (1274), Expect = e-137
 Identities = 237/324 (73%), Positives = 272/324 (83%), Gaps = 2/324 (0%)
 Frame = +2

Query: 179  YQEYMHEHHQNELPGVGFKNLKKILKKCRSHLQSQDLENTNGGVPENSSSSCPHQCPVCD 358
            YQEYM +  Q +LPGV FK LKKILKKCR   +S           ++   SCPH CPVCD
Sbjct: 7    YQEYM-QGQQKQLPGVDFKKLKKILKKCRKDFESHQ---------DHDGQSCPHHCPVCD 56

Query: 359  GTFFSSLLNEMSAIVGCFNERAQKLLDLHLASGFRKYVVWFRSKQRKDHGDLIQEGKDLV 538
            GTFF SL+ EMSA+VGCFN+RAQKLL+LHLASGFRKY +WF+ + +KDH  LIQEGKDLV
Sbjct: 57   GTFFPSLVKEMSAVVGCFNKRAQKLLELHLASGFRKYFMWFQGRLQKDHAALIQEGKDLV 116

Query: 539  TYAMINAIAIRKILKKYDKVHYCKQGQVFKSQAQSLHIEILQSPWLCELIAFHINLRETK 718
            TYA+INAIA+RKILKKYDK+HY KQGQ FKS+AQS+HIEILQSPWLCEL+AFHINLRETK
Sbjct: 117  TYALINAIAVRKILKKYDKIHYSKQGQAFKSKAQSMHIEILQSPWLCELMAFHINLRETK 176

Query: 719  ART--ISGLFEGFSLKLEDEKPLLSCSLFDSIKLDIELTCSICLDTVFDPVSLTCGHIFC 892
             +      LFEG SL  +D+KP LSC LFDSIKLDI+LTCSICLDTVFDPVSLTCGHIFC
Sbjct: 177  VKPNKAPALFEGCSLTFDDDKPSLSCELFDSIKLDIDLTCSICLDTVFDPVSLTCGHIFC 236

Query: 893  YMCACSSASVTIVDGLKSALPRAKCPLCREAAVYEGAVHLEELNILLSRSCREYWKERLQ 1072
            YMCACS+ASVTIVDGLK+A P+ KCPLCR+  VYEGA+HLEELNILLSRS  +YW++RLQ
Sbjct: 237  YMCACSAASVTIVDGLKAAEPKEKCPLCRKTGVYEGALHLEELNILLSRSFHKYWEQRLQ 296

Query: 1073 SERVERIKQAKEHWESQCRAFIGV 1144
            +ER+ERI+Q KEHWESQCRAF+GV
Sbjct: 297  TERIERIRQVKEHWESQCRAFMGV 320


>ref|XP_002265436.1| PREDICTED: E3 ubiquitin-protein ligase BAH1 [Vitis vinifera]
            gi|297743873|emb|CBI36843.3| unnamed protein product
            [Vitis vinifera]
          Length = 324

 Score =  494 bits (1271), Expect = e-137
 Identities = 245/324 (75%), Positives = 269/324 (83%), Gaps = 2/324 (0%)
 Frame = +2

Query: 179  YQEYMHEHHQNELPGVGFKNLKKILKKCRSHLQSQDLENTNGGVPENSSSSCPHQCPVCD 358
            YQEYM +  + +LPGVGFK LKKILK+CR  LQ Q        +P     +CPH C VCD
Sbjct: 7    YQEYM-QAQEKKLPGVGFKKLKKILKRCRRDLQIQKGLEGVVDIP-----TCPHHCQVCD 60

Query: 359  GTFFSSLLNEMSAIVGCFNERAQKLLDLHLASGFRKYVVWFRSKQRKDHGDLIQEGKDLV 538
            GTFF SLL EMS IVGCFNERAQKLLDLHLASG RKY +WF+ K + +H  LIQEGKDLV
Sbjct: 61   GTFFPSLLKEMSEIVGCFNERAQKLLDLHLASGVRKYYIWFKGKLQGNHVALIQEGKDLV 120

Query: 539  TYAMINAIAIRKILKKYDKVHYCKQGQVFKSQAQSLHIEILQSPWLCELIAFHINLRETK 718
            TYAMINA AIRKILKKYDKVHY KQGQ FKSQAQS+H+EILQSPWLCEL+AFHINLRE+K
Sbjct: 121  TYAMINATAIRKILKKYDKVHYSKQGQAFKSQAQSMHMEILQSPWLCELMAFHINLRESK 180

Query: 719  A--RTISGLFEGFSLKLEDEKPLLSCSLFDSIKLDIELTCSICLDTVFDPVSLTCGHIFC 892
            A  R    LF+G SL   D KP LSC LFDS+KLDI+LTCSICLDTVFDPVSLTCGHIFC
Sbjct: 181  AKSRKAPALFDGCSLTFNDGKPSLSCELFDSVKLDIDLTCSICLDTVFDPVSLTCGHIFC 240

Query: 893  YMCACSSASVTIVDGLKSALPRAKCPLCREAAVYEGAVHLEELNILLSRSCREYWKERLQ 1072
            YMCACS+ASVTIVDGLK A P+ KCPLCREA VYEGAVHLEELNILLSRSC EYW++RLQ
Sbjct: 241  YMCACSAASVTIVDGLKIAEPKEKCPLCREAGVYEGAVHLEELNILLSRSCHEYWEQRLQ 300

Query: 1073 SERVERIKQAKEHWESQCRAFIGV 1144
            +ER ERI+QAKEHWESQCRAF+GV
Sbjct: 301  TERTERIRQAKEHWESQCRAFMGV 324


>ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|222844434|gb|EEE81981.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  489 bits (1259), Expect = e-136
 Identities = 232/324 (71%), Positives = 268/324 (82%), Gaps = 2/324 (0%)
 Frame = +2

Query: 179  YQEYMHEHHQNELPGVGFKNLKKILKKCRSHLQSQDLENTNGGVPENSSSSCPHQCPVCD 358
            YQEYM +  +N LP V FK LKKILKKCR   +S           E+   SCPH C VCD
Sbjct: 7    YQEYM-QGKENRLPAVDFKKLKKILKKCREDFESHQ---------EHDGQSCPHHCSVCD 56

Query: 359  GTFFSSLLNEMSAIVGCFNERAQKLLDLHLASGFRKYVVWFRSKQRKDHGDLIQEGKDLV 538
            GTFF SLL EMSA+VGCFNERAQKLL+LHL SGFRKY +WF+ K +K H   IQEGKDLV
Sbjct: 57   GTFFPSLLKEMSAVVGCFNERAQKLLELHLVSGFRKYFMWFKGKLQKKHVAFIQEGKDLV 116

Query: 539  TYAMINAIAIRKILKKYDKVHYCKQGQVFKSQAQSLHIEILQSPWLCELIAFHINLRETK 718
            TYA+INA+A+RKILKKYDK+HY KQGQ FKS+AQS+HIEIL SPWLCEL+AFHINLRE K
Sbjct: 117  TYALINAVAVRKILKKYDKIHYSKQGQTFKSKAQSMHIEILHSPWLCELMAFHINLREEK 176

Query: 719  ART--ISGLFEGFSLKLEDEKPLLSCSLFDSIKLDIELTCSICLDTVFDPVSLTCGHIFC 892
             ++  +  LFEG SL  +DEKP LSC LFDS+K+DI+LTCSICLDTVFDPVSLTCGHIFC
Sbjct: 177  IKSNKVPALFEGCSLNFDDEKPSLSCELFDSVKIDIDLTCSICLDTVFDPVSLTCGHIFC 236

Query: 893  YMCACSSASVTIVDGLKSALPRAKCPLCREAAVYEGAVHLEELNILLSRSCREYWKERLQ 1072
            +MCACS+ASVTIVDGLK+A P+ KCPLCR+  VYEG++HLEELNILLSRSC EYW++RLQ
Sbjct: 237  HMCACSAASVTIVDGLKAAEPKEKCPLCRKTGVYEGSLHLEELNILLSRSCHEYWEQRLQ 296

Query: 1073 SERVERIKQAKEHWESQCRAFIGV 1144
            +ER+ERI+Q KEHWESQCRAF+GV
Sbjct: 297  TERIERIRQVKEHWESQCRAFVGV 320


>ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 1 [Glycine
            max]
          Length = 324

 Score =  483 bits (1244), Expect = e-134
 Identities = 235/324 (72%), Positives = 274/324 (84%), Gaps = 2/324 (0%)
 Frame = +2

Query: 179  YQEYMHEHHQNELPGVGFKNLKKILKKCRSHLQSQDLENTNGGVPENSSSSCPHQCPVCD 358
            YQEYM +  + +LPGVGFK LKKILKKCR +  SQ   + +      ++ +CP  CPVCD
Sbjct: 7    YQEYM-QGQEKKLPGVGFKKLKKILKKCRRNSSSQKPLHAS-----LAAKTCPDHCPVCD 60

Query: 359  GTFFSSLLNEMSAIVGCFNERAQKLLDLHLASGFRKYVVWFRSKQRKDHGDLIQEGKDLV 538
            GTFF SLLNEMS IVGCFN+RAQKLL+LHLASG RKY +W + K + +H  LIQEGKDLV
Sbjct: 61   GTFFPSLLNEMSDIVGCFNQRAQKLLELHLASGVRKYFLWIKGKLQGNHTALIQEGKDLV 120

Query: 539  TYAMINAIAIRKILKKYDKVHYCKQGQVFKSQAQSLHIEILQSPWLCELIAFHINLRETK 718
            TYA+INAIAIRKILKKYDK+HY KQGQ+FKSQ QS+H EILQSPWLCEL+AFHINLRETK
Sbjct: 121  TYALINAIAIRKILKKYDKIHYSKQGQLFKSQIQSMHKEILQSPWLCELMAFHINLRETK 180

Query: 719  --ARTISGLFEGFSLKLEDEKPLLSCSLFDSIKLDIELTCSICLDTVFDPVSLTCGHIFC 892
              +R    LF+G SL  +D KP L+C LFDSIK+DI+LTCSICLDTVFDPVSLTCGHIFC
Sbjct: 181  VKSRKAHALFDGCSLTFKDGKPALTCELFDSIKVDIDLTCSICLDTVFDPVSLTCGHIFC 240

Query: 893  YMCACSSASVTIVDGLKSALPRAKCPLCREAAVYEGAVHLEELNILLSRSCREYWKERLQ 1072
            Y+CACS+ASV+IV+GLKSA P+ KCPLCRE AVYEGAVHLEELNILLSRSC+EYW++R+Q
Sbjct: 241  YICACSAASVSIVNGLKSADPKMKCPLCREGAVYEGAVHLEELNILLSRSCQEYWEQRIQ 300

Query: 1073 SERVERIKQAKEHWESQCRAFIGV 1144
            +ERVER+KQ KEHW+SQCRAF+GV
Sbjct: 301  TERVERVKQIKEHWDSQCRAFVGV 324