BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004995
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   167   1e-39
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
gb|ABK94910.1| unknown [Populus trichocarpa]                          160   1e-37
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
gb|AAM64697.1| PRT1 [Arabidopsis thaliana]                            158   5e-37

>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  167 bits (422), Expect = 1e-39
 Identities = 71/96 (73%), Positives = 82/96 (85%)
 Frame = +1

Query: 79  DVEDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYSHFPSI 258
           D +++  +F CCVCLDLLYKPIVLACGHISCFWCVH++M G  ESHCPICR PYSHFP+I
Sbjct: 14  DSDEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTI 73

Query: 259 CQLLHFLLLKMYPVAYKRREKQMLEEEKRRGFFSPQ 366
           CQ+LHF+LLKMYPVAYKRREKQ LE E+    FSP+
Sbjct: 74  CQMLHFMLLKMYPVAYKRREKQTLEREEETRCFSPR 109


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  160 bits (405), Expect = 1e-37
 Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 5/118 (4%)
 Frame = +1

Query: 85  EDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYSHFPSICQ 264
           E+  ++F C VCLDLLYKPIVL+CGHISCFWCVH +MSG+ ES+CPICR PY+HFP+ICQ
Sbjct: 18  EEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQ 77

Query: 265 LLHFLLLKMYPVAYKRREKQMLEEEKRRGFFSPQLG-----DNVLRVHSCEESNCLDS 423
           +LHFLL K+YP+ Y RRE+Q LEEE   GFFSPQ G      ++   H  +  + LDS
Sbjct: 78  MLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHHHPRDRKHALDS 135


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  160 bits (405), Expect = 1e-37
 Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 5/118 (4%)
 Frame = +1

Query: 85  EDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYSHFPSICQ 264
           E+  ++F C VCLDLLYKPIVL+CGHISCFWCVH +MSG+ ES+CPICR PY+HFP+ICQ
Sbjct: 31  EEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQ 90

Query: 265 LLHFLLLKMYPVAYKRREKQMLEEEKRRGFFSPQLG-----DNVLRVHSCEESNCLDS 423
           +LHFLL K+YP+ Y RRE+Q LEEE   GFFSPQ G      ++   H  +  + LDS
Sbjct: 91  MLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHHHPRDRKHALDS 148


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/118 (61%), Positives = 91/118 (77%)
 Frame = +1

Query: 73  IDDVEDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYSHFP 252
           + + ED  + F C VCLDLLYKP+VL CGH+SCFWCV ++M+G+ ESHCPICR  ++HFP
Sbjct: 41  VREEEDFLDEFQCSVCLDLLYKPVVLGCGHLSCFWCVFYSMNGLRESHCPICRHQFNHFP 100

Query: 253 SICQLLHFLLLKMYPVAYKRREKQMLEEEKRRGFFSPQLGDNVLRVHSCEESNCLDSP 426
           S+CQLLHFLL+KMYP+AYKRRE+++ EEEK+ G FSPQ   +    HS EE   LD P
Sbjct: 101 SVCQLLHFLLMKMYPIAYKRREREVGEEEKKGGRFSPQFVHHPFGSHSGEE---LDFP 155


>gb|AAM64697.1| PRT1 [Arabidopsis thaliana]
          Length = 401

 Score =  158 bits (400), Expect = 5e-37
 Identities = 73/133 (54%), Positives = 97/133 (72%)
 Frame = +1

Query: 85  EDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYSHFPSICQ 264
           E++ + F+CCVCL+LLYKPIVL+CGH+SCFWCVH +M+G  ESHCPICR PY HFPS+CQ
Sbjct: 9   EEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYVHFPSVCQ 68

Query: 265 LLHFLLLKMYPVAYKRREKQMLEEEKRRGFFSPQLGDNVLRVHSCEESNCLDSPETFSGM 444
            L+FLL KMYP+A+K+RE+Q+L+EE+ R  FSPQ+ D VL +  C   +   S +     
Sbjct: 69  KLYFLLKKMYPLAHKKREEQVLKEEQERECFSPQI-DLVLDLSVCSGDSLXXSDKQKVEE 127

Query: 445 CFQTAPYGSTCSN 483
           C   A   S+ S+
Sbjct: 128 CSNAANLLSSSSS 140