BLASTX nr result

ID: Coptis23_contig00004987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004987
         (1416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274694.1| PREDICTED: uncharacterized protein LOC100251...   397   e-108
ref|XP_002528397.1| conserved hypothetical protein [Ricinus comm...   388   e-105
ref|XP_002324519.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002309367.1| predicted protein [Populus trichocarpa] gi|2...   362   1e-97
ref|XP_003522941.1| PREDICTED: uncharacterized protein LOC100807...   345   2e-92

>ref|XP_002274694.1| PREDICTED: uncharacterized protein LOC100251901 [Vitis vinifera]
          Length = 553

 Score =  397 bits (1019), Expect = e-108
 Identities = 213/338 (63%), Positives = 256/338 (75%), Gaps = 7/338 (2%)
 Frame = +2

Query: 2    PQPRKHTLWQATSDFTGGQASVNRRHFLQCPPGLLNKNFEKLIQCDPRLNWLSRQPEIVL 181
            PQPRKHTLWQAT+DFT GQAS++R+HFLQCP GLLNK+FEKLIQCD RLN+LSRQPEIVL
Sbjct: 217  PQPRKHTLWQATADFTDGQASIHRQHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIVL 276

Query: 182  ESPYFEPKGSIFEDPDNNKSSDLDQLTGDFVSTLSGFRDGSSPSAVQSSSTMSDLRDSAG 361
            +SPYFE + S+FEDPD +K    DQL     ST+SGF+D +SP+A QSSS   + RD  G
Sbjct: 277  DSPYFE-RVSVFEDPDESKVEGFDQLESVQGSTISGFQDVASPTAAQSSSLKIEPRDPVG 335

Query: 362  RAPDNLSRDTPSPSSVMDPCAIEDNGSGETEHSKMPSHLNQLKVPGLHSSMSMSDLVNHI 541
             A +NLSR++PSPSSVMD  A+E + + ET+  K   +  QLKVPGLH S+SMSDL+NHI
Sbjct: 336  LASENLSRESPSPSSVMDTRAMEGSRNCETDDLKRQRNWEQLKVPGLHPSISMSDLMNHI 395

Query: 542  GNCISEQMTSGNPLFS-DGLQNENMLDDIAQYLLSDSQHASTSDEKSLMSRVNSLCCLLQ 718
             N ISEQMTSGNP  S +G++ + +L+DIAQYLLSDS   + SDEKSLMSRVNSLCCLLQ
Sbjct: 396  ENRISEQMTSGNPALSEEGVECQGILEDIAQYLLSDSHFTAASDEKSLMSRVNSLCCLLQ 455

Query: 719  KDSTTPQNSQVNGEACIERSD---DGRVSWKANS--ETKISSEASERGGDLNDSSGHKQV 883
            KD  + QN Q+NGE C E  D   D +++  + S  E K   + +   GD  D +G+KQ 
Sbjct: 456  KDPGSVQNLQMNGEGCFEELDEKKDVQLNHTSESVHENKAPGDITVPEGDSKDVTGYKQA 515

Query: 884  PAMSRKDSLGDLLLHLPRIASLPQFLFNIPEDD-NQAR 994
            PAMSRKDS GDLLLHLPRI SLP+FLFNI EDD NQAR
Sbjct: 516  PAMSRKDSFGDLLLHLPRITSLPKFLFNISEDDENQAR 553


>ref|XP_002528397.1| conserved hypothetical protein [Ricinus communis]
            gi|223532185|gb|EEF33990.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 560

 Score =  388 bits (996), Expect = e-105
 Identities = 208/340 (61%), Positives = 260/340 (76%), Gaps = 9/340 (2%)
 Frame = +2

Query: 2    PQPRKHTLWQATSDFTGGQASVNRRHFLQCPPGLLNKNFEKLIQCDPRLNWLSRQPEIVL 181
            PQPRKHTLWQAT+DFT GQAS++R+HFLQCP GLLNK+FEKLIQCD RLN+LSRQPEI+L
Sbjct: 222  PQPRKHTLWQATADFTNGQASIHRQHFLQCPQGLLNKHFEKLIQCDMRLNFLSRQPEIIL 281

Query: 182  ESPYFEPKGSIFEDPDNNKSSDLDQL-TGDFVSTLSGFRD-GSSPSAVQSSSTMSDLRDS 355
            +SPYFE + S+FEDPD+ KS D +++  G   S+ SGF+D  +SPSA  SSS   ++ D 
Sbjct: 282  DSPYFEQRTSVFEDPDDPKSQDFNKVEMGIASSSASGFQDLVASPSAAHSSSL--EIGDH 339

Query: 356  AGRAPDNLSRDTPSPSSVMDPCAIEDNGSGETEHSKMPSHLNQLKVPGLHSSMSMSDLVN 535
            AG   + +SR+ PSPSSVMD  AIE NG+ E   SK   + +Q+KVPGLH SMSMSDL+N
Sbjct: 340  AGTTSEQMSREAPSPSSVMDTRAIEGNGNCEAVDSKGLRNWDQIKVPGLHPSMSMSDLMN 399

Query: 536  HIGNCISEQMTSGNP-LFSDGLQNENMLDDIAQYLLSDSQHASTSDEKSLMSRVNSLCCL 712
            HI NCISEQ+TSGNP L +DG + +N+L+DIAQYLLSD+Q  ++SDEK LM+RVNSLCCL
Sbjct: 400  HIENCISEQITSGNPSLSADGSEGQNILEDIAQYLLSDNQLTTSSDEKRLMARVNSLCCL 459

Query: 713  LQKDSTTPQNSQVNGEACIERSDDGRVSWKANSETKISSEASERGG----DLN--DSSGH 874
            LQKD  + QNSQ N E  +  SD+G+   + N+  +  +E   +GG    +LN  D SG 
Sbjct: 460  LQKDPASSQNSQANEEIYVGESDNGK-GVQLNNTYESLNENKNKGGIKDPELNTKDVSGS 518

Query: 875  KQVPAMSRKDSLGDLLLHLPRIASLPQFLFNIPEDDNQAR 994
            KQVP MSRKDS GDLLLHLPRIASLP+FLFNI E+D +++
Sbjct: 519  KQVPGMSRKDSFGDLLLHLPRIASLPKFLFNISEEDGESQ 558


>ref|XP_002324519.1| predicted protein [Populus trichocarpa] gi|222865953|gb|EEF03084.1|
            predicted protein [Populus trichocarpa]
          Length = 555

 Score =  381 bits (979), Expect = e-103
 Identities = 197/334 (58%), Positives = 247/334 (73%), Gaps = 7/334 (2%)
 Frame = +2

Query: 2    PQPRKHTLWQATSDFTGGQASVNRRHFLQCPPGLLNKNFEKLIQCDPRLNWLSRQPEIVL 181
            PQPRKHTLWQAT+DFT GQAS++++HFLQCP GLLNK+FEKLIQCD RLN+LS+QPEI+L
Sbjct: 222  PQPRKHTLWQATADFTDGQASIHKQHFLQCPEGLLNKHFEKLIQCDMRLNFLSQQPEIIL 281

Query: 182  ESPYFEPKGSIFEDPDNNKSSDLDQLTGDFVSTLSGFRDGSSPSAVQSSSTMSDLRDSAG 361
            +SPYFE + S+FED D++KS D +Q+    VS +SGF+D +SPSA QSSS   +  D   
Sbjct: 282  DSPYFEQRPSVFEDLDDSKSQDFNQVESAKVSVVSGFQDLASPSAAQSSSLEIEKGDPTA 341

Query: 362  RAPDNLSRDTPSPSSVMDPCAIEDNGSGETEHSKMPSHLNQLKVPGLHSSMSMSDLVNHI 541
               D +SR+ PSPSSVMD  AIE  G  E   SK P + +Q+KVPGL  SMSM+DL+NHI
Sbjct: 342  STSDPMSREAPSPSSVMDSRAIEGRGICEAVDSKAPRNWDQIKVPGLRPSMSMTDLMNHI 401

Query: 542  GNCISEQMTSGN-PLFSDGLQNENMLDDIAQYLLSDSQHASTSDEKSLMSRVNSLCCLLQ 718
            GNCISEQMTSGN P  +DG + +++L+DIAQYLLSD+Q  ++SDEK +M+RVNSLCCLLQ
Sbjct: 402  GNCISEQMTSGNQPFSADGSECQDILEDIAQYLLSDTQQTTSSDEKGIMARVNSLCCLLQ 461

Query: 719  KDSTTPQNSQVNGEACIERSDDGR-----VSWKANSETKISSE-ASERGGDLNDSSGHKQ 880
            KD  + QN Q NGE+  E  ++G+      + ++  E K+  +     G    D SG K 
Sbjct: 462  KDPASTQNLQGNGESFFEEPNNGKGVLLNHTNESFHENKVRGDIRGSEGSSSKDISGSKP 521

Query: 881  VPAMSRKDSLGDLLLHLPRIASLPQFLFNIPEDD 982
             P MSRKDS GDLLLHLPRIASLP+FLFNI E+D
Sbjct: 522  APGMSRKDSFGDLLLHLPRIASLPKFLFNISEED 555


>ref|XP_002309367.1| predicted protein [Populus trichocarpa] gi|222855343|gb|EEE92890.1|
            predicted protein [Populus trichocarpa]
          Length = 508

 Score =  362 bits (930), Expect = 1e-97
 Identities = 192/328 (58%), Positives = 238/328 (72%), Gaps = 1/328 (0%)
 Frame = +2

Query: 2    PQPRKHTLWQATSDFTGGQASVNRRHFLQCPPGLLNKNFEKLIQCDPRLNWLSRQPEIVL 181
            PQPRKHTLWQAT+DFT GQAS++++HFLQ P GLLNK+FEKLIQCD RLN+LSRQPEI L
Sbjct: 193  PQPRKHTLWQATADFTDGQASIHKQHFLQFPQGLLNKHFEKLIQCDMRLNFLSRQPEINL 252

Query: 182  ESPYFEPKGSIFEDPDNNKSSDLDQLTGDFVSTLSGFRDGSSPSAVQSSSTMSDLRDSAG 361
             SPYFE +  +FED D++K  D +Q+    VS +SGF   +SPSA QSSS   D  D + 
Sbjct: 253  NSPYFEQRPPVFEDLDDSKCQDFNQVESAKVSVVSGFHHLASPSAAQSSSLEIDKEDPSA 312

Query: 362  RAPDNLSRDTPSPSSVMDPCAIEDNGSGETEHSKMPSHLNQLKVPGLHSSMSMSDLVNHI 541
               D++SR+ PSPSSVMD  AIE +G  E   S+ P + +Q+KVPGL  SMSM+DL+NHI
Sbjct: 313  STSDHMSREAPSPSSVMDTRAIEGSGICEAVDSRAPRNWDQIKVPGLRHSMSMTDLMNHI 372

Query: 542  GNCISEQMTSGNPLFS-DGLQNENMLDDIAQYLLSDSQHASTSDEKSLMSRVNSLCCLLQ 718
            GNCISEQMTSGN LFS +  +  ++L+DIAQ LLSD+Q  ++SDEK +M+RVNSLCCLLQ
Sbjct: 373  GNCISEQMTSGNQLFSANESECRDILEDIAQCLLSDTQQTTSSDEKRIMARVNSLCCLLQ 432

Query: 719  KDSTTPQNSQVNGEACIERSDDGRVSWKANSETKISSEASERGGDLNDSSGHKQVPAMSR 898
            KD  + QN +VNGE+  E S++G+   + N              D+ D SG KQ   MSR
Sbjct: 433  KDPASTQNLEVNGESFFEESNNGK-GLQLNCT-----------NDIKDVSGSKQALGMSR 480

Query: 899  KDSLGDLLLHLPRIASLPQFLFNIPEDD 982
            KDS GDLLLHLPRIASLP+ LFNI E+D
Sbjct: 481  KDSFGDLLLHLPRIASLPKLLFNISEED 508


>ref|XP_003522941.1| PREDICTED: uncharacterized protein LOC100807349 [Glycine max]
          Length = 533

 Score =  345 bits (884), Expect = 2e-92
 Identities = 190/331 (57%), Positives = 235/331 (70%), Gaps = 1/331 (0%)
 Frame = +2

Query: 2    PQPRKHTLWQATSDFTGGQASVNRRHFLQCPPGLLNKNFEKLIQCDPRLNWLSRQPEIVL 181
            PQPRKHTLWQAT+DFT GQ+S +R HFLQCP GLL K+FEKLIQCD RLN+LS+QPEI+L
Sbjct: 215  PQPRKHTLWQATADFTDGQSSKHRLHFLQCPQGLLAKHFEKLIQCDMRLNFLSQQPEIIL 274

Query: 182  ESPYFEPKGSIFEDPDNNKSSDLDQLTGDFVSTLSGFRDGSSPSAVQSSSTMSDLRDSAG 361
            +SP+F+ + S FEDPDN K  DL Q++G   ST S ++D  SP A  SSS   +  D  G
Sbjct: 275  DSPHFDTQPSAFEDPDNPKDHDLLQVSGKGSST-SCYQDSGSPQASLSSSFKIEHNDPPG 333

Query: 362  RAPDNLSRDTPSPSSVMDPCAIEDNGSGETEHSKMPSHLNQLKVPGLHSSMSMSDLVNHI 541
               D+L RD PSPSSVM+  +IE + S ET+ SK P + +Q+K+PGL  SMS+SD +  I
Sbjct: 334  MMLDSLPRDAPSPSSVMECTSIEGSTSSETD-SKGPRNGDQIKLPGLRPSMSVSDFIGQI 392

Query: 542  GNCISEQMTSGNPLFSD-GLQNENMLDDIAQYLLSDSQHASTSDEKSLMSRVNSLCCLLQ 718
              C+SEQ+TSGNP FSD G + + +L+DIAQ+LL+D+Q A+TSDEKSLMSRVNSLCCLLQ
Sbjct: 393  ELCLSEQITSGNPPFSDGGSEYKEILEDIAQHLLNDNQVAATSDEKSLMSRVNSLCCLLQ 452

Query: 719  KDSTTPQNSQVNGEACIERSDDGRVSWKANSETKISSEASERGGDLNDSSGHKQVPAMSR 898
            KD  T QNS    +  +E  DDG+    A  E+K             D+SG KQ   MSR
Sbjct: 453  KDPVTVQNSHFTEDNTVEGPDDGKDVKPAVEESK-------------DASGGKQALGMSR 499

Query: 899  KDSLGDLLLHLPRIASLPQFLFNIPEDDNQA 991
            KDS  DLLLHLPRIASLP+FLFNI E+D  +
Sbjct: 500  KDSFSDLLLHLPRIASLPKFLFNISEEDGNS 530


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