BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004951
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...    69   4e-10
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    67   2e-09
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    56   4e-06
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...    55   8e-06

>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/105 (41%), Positives = 60/105 (57%)
 Frame = -2

Query: 442  PGPHALSIPGMLSSSSLGNELHLPKPFGNGDERESREIKNVCKKDEVGQSSEVGGSDQLP 263
            PGPH  S  GM SSS L ++L LPK     DE    + +   +KD+  Q         LP
Sbjct: 2155 PGPHLSSSSGMTSSSFLESKLPLPKSV---DEVGVSDAQGAEEKDKDMQGLPPDTQIILP 2211

Query: 262  VERFGKTESGDSSKTYSDPRQNDKADIEEISSEETLSDHRRSEQK 128
             E+ G+ + GDSSK+ ++  Q +K D+EEISSE T+SDH  SE +
Sbjct: 2212 EEKPGQPDDGDSSKSGTNNSQTEKPDVEEISSEGTVSDHLVSEHE 2256


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -2

Query: 442  PGPHALSIPGMLSSSSLGNELHLPKPFGNGDERESREIKNVCKKDEVGQSSEVGGSDQLP 263
            PGPH   +PGM SS  L ++L LPK    G+  +S       K     Q+S +     L 
Sbjct: 2250 PGPHIPPVPGMPSSGFLDSKLPLPKFIDRGEFPDSTGASGNQKGK---QTSTLSVHAPLN 2306

Query: 262  VERFGKTESGDSS-KTYSDPRQNDKADIEEISSEETLSDHRRSEQK 128
             ER  + ESGDSS KT SDP   +  ++EEISSE T+SDHR S+ +
Sbjct: 2307 QERREQIESGDSSSKTQSDPSHAEHPNVEEISSEGTVSDHRVSDHE 2352


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
 Frame = -2

Query: 442  PGPHALSIPGMLSSSSLGNELHLPKPFGNGDERESREIKNVCKKDEVGQSSEVGGSDQ-- 269
            PGPH  S  G  S+S   +++ LPK                   D+VG S  +G  ++  
Sbjct: 2231 PGPHLSSGSGATSASLHESKVPLPK-----------------SPDQVGISDPLGALEEPM 2273

Query: 268  -----------LPVERFGKTESGDSSKTYSDPRQNDKADIEEISSEETLSDHRRSEQK 128
                       +P +R  + +SGDSSKT SD     + D+E+ISSE TLSDH  S+Q+
Sbjct: 2274 DTERSPPQVQCIPEKRLDQPDSGDSSKTESDLSPIKQPDVEDISSEGTLSDHPVSDQE 2331


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/105 (35%), Positives = 54/105 (51%)
 Frame = -2

Query: 442  PGPHALSIPGMLSSSSLGNELHLPKPFGNGDERESREIKNVCKKDEVGQSSEVGGSDQLP 263
            PGPH  SI G  +S+ L ++L LP+P G    ++S          +V         +Q  
Sbjct: 2226 PGPHLPSITG--ASNFLDSKLPLPRPVGRAKFKDSEGAFRNKNPRQVSPKIWCPPQEQ-- 2281

Query: 262  VERFGKTESGDSSKTYSDPRQNDKADIEEISSEETLSDHRRSEQK 128
                   +SGDSSKT SDP + ++ D  E+SSE T+SDH   +Q+
Sbjct: 2282 --EVHDLDSGDSSKTQSDPSRVERPDEVEVSSEGTVSDHAVRDQE 2324