BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004949
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002588949.1| hypothetical protein BRAFLDRAFT_89140 [Branc...    60   1e-07
ref|XP_002588954.1| hypothetical protein BRAFLDRAFT_89145 [Branc...    59   4e-07
ref|XP_001312399.1| chagas antigen [Trichomonas vaginalis G3] gi...    56   3e-06

>ref|XP_002588949.1| hypothetical protein BRAFLDRAFT_89140 [Branchiostoma floridae]
           gi|229274121|gb|EEN44960.1| hypothetical protein
           BRAFLDRAFT_89140 [Branchiostoma floridae]
          Length = 266

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -2

Query: 292 CLMISGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKF 116
           C    G++RKR C    GV+ KR C    GV++KR+C    GV RKR C    GV++++ 
Sbjct: 135 CCRRGGVSRKRVCCRRGGVSQKRVCCRRGGVSQKRVCCRRGGVSRKRVCCRRGGVSQKRV 194

Query: 115 CLMVTGVS-RRLCRLVIGMSRKRLRLLVMGVEGKRLC 8
           C    GVS +R+C    G+SRKR+     GV  KR+C
Sbjct: 195 CCRRGGVSQKRVCCRRGGVSRKRVCCRRGGVSRKRVC 231


>ref|XP_002588954.1| hypothetical protein BRAFLDRAFT_89145 [Branchiostoma floridae]
           gi|229274126|gb|EEN44965.1| hypothetical protein
           BRAFLDRAFT_89145 [Branchiostoma floridae]
          Length = 2669

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -2

Query: 292 CLMISGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKF 116
           C   SG+++KR C   +GV+ KR C    GV RKR+C    GV +KR C    GV+++  
Sbjct: 295 CCRRSGVSQKRVCCRRSGVSQKRVCCRRGGVARKRVCCRRGGVAQKRVCCRRGGVSQKHV 354

Query: 115 CLMVTGVSR-RLCRLVIGMSRKRLRLLVMGVEGKRLC 8
           C    GVSR R+C    G+S+KR+     GV  KR+C
Sbjct: 355 CCRRGGVSRKRVCCRRGGVSQKRVCCRRGGVSRKRVC 391



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -2

Query: 280 SGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKFCLMV 104
           SG+++KR C   +GV+ KR C   +GV++KR+C    GV RKR C    GV +++ C   
Sbjct: 287 SGVSQKRVCCRRSGVSQKRVCCRRSGVSQKRVCCRRGGVARKRVCCRRGGVAQKRVCCRR 346

Query: 103 TGVSRR-LCRLVIGMSRKRLRLLVMGVEGKRLC 8
            GVS++ +C    G+SRKR+     GV  KR+C
Sbjct: 347 GGVSQKHVCCRRGGVSRKRVCCRRGGVSQKRVC 379



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
 Frame = -2

Query: 292 CLMISGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKF 116
           C    G++RKR C    GV+ KR C    GV+RKR+C    GV +KR C    GV+R+  
Sbjct: 355 CCRRGGVSRKRVCCRRGGVSQKRVCCRRGGVSRKRVCCRRGGVAQKRVCCRRGGVSRKHV 414

Query: 115 CLMVTGVSR-RLCRLVIGMSRKRL--RLLVMGVEG 20
           C    GVSR R+C    G+S+KR+  R+ V  VEG
Sbjct: 415 CCRRGGVSRKRVCCRRGGVSQKRVCSRISVSAVEG 449



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = -2

Query: 292 CLMISGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKF 116
           C   SG+++KR C    GV  KR C    GV +KR+C    GV +K  C    GV+R++ 
Sbjct: 307 CCRRSGVSQKRVCCRRGGVARKRVCCRRGGVAQKRVCCRRGGVSQKHVCCRRGGVSRKRV 366

Query: 115 CLMVTGVS-RRLCRLVIGMSRKRLRLLVMGVEGKRLC 8
           C    GVS +R+C    G+SRKR+     GV  KR+C
Sbjct: 367 CCRRGGVSQKRVCCRRGGVSRKRVCCRRGGVAQKRVC 403



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = -2

Query: 292 CLMISGMNRKRHCLIITGVNIKRPCLVVTGVNRKRLCLMITGV-RKRPCLMITGVNRRKF 116
           C    G+++K  C    GV+ KR C    GV++KR+C    GV RKR C    GV +++ 
Sbjct: 343 CCRRGGVSQKHVCCRRGGVSRKRVCCRRGGVSQKRVCCRRGGVSRKRVCCRRGGVAQKRV 402

Query: 115 CLMVTGVSRR-LCRLVIGMSRKRLRLLVMGVEGKRLC 8
           C    GVSR+ +C    G+SRKR+     GV  KR+C
Sbjct: 403 CCRRGGVSRKHVCCRRGGVSRKRVCCRRGGVSQKRVC 439


>ref|XP_001312399.1| chagas antigen [Trichomonas vaginalis G3]
           gi|121894244|gb|EAX99469.1| chagas antigen, putative
           [Trichomonas vaginalis G3]
          Length = 536

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   HQTKSLSFHSHNQQTESLSAHSY-H*PTKSPAHSCDHQTKFPSVHSCDHQT-RSLSHSRD 175
           H T + + HS    T   + HS  H    S AHS  H T  P+ HS  H T  S +HS  
Sbjct: 137 HSTPNSTPHSTAHSTAHSTPHSTAHKTPFSTAHSTPHSTAHPTAHSTPHSTPHSTAHSTP 196

Query: 176 HQTQSLSVHSCDHQTRSLYVHSCDNQTVSLSVHS*DHQT 292
           H T   + HS  H T     HS  + T   + HS  H T
Sbjct: 197 HSTAHPTAHSTPHSTPHSTAHSTPHSTAHSTAHSTPHST 235