BLASTX nr result

ID: Coptis23_contig00004947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004947
         (2062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   438   e-120
ref|XP_002524598.1| transcription factor, putative [Ricinus comm...   436   e-120
ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   416   e-114
ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   410   e-112
ref|XP_003542186.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   408   e-111

>ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE 10 [Vitis vinifera]
          Length = 414

 Score =  438 bits (1127), Expect = e-120
 Identities = 236/419 (56%), Positives = 288/419 (68%), Gaps = 3/419 (0%)
 Frame = -3

Query: 1880 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1701
            MGQLCD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALSRRHSRTLLCERCN+QPA+VRC
Sbjct: 1    MGQLCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPATVRC 60

Query: 1700 VSDKMSLCQNCDWNEHCNSASSTTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1521
            V +K+SLCQNC+W  H  S +S + H+RQTINCYSGCPSA ELSRIWSFVL+  S D+  
Sbjct: 61   VEEKISLCQNCNWIGH-GSTTSASDHKRQTINCYSGCPSAAELSRIWSFVLEFLSVDDSN 119

Query: 1520 CEKRMGLMSIDENCVSNYSGRSDSNGNSTVDPSFQGKSK-MENEGHFSIWPGSSSVAAGN 1344
            CE+ M LMS+ EN V + S       N+  D +  G++   EN     +W  SS V A N
Sbjct: 120  CEQGMVLMSLTENSVGSCS--LPPVNNNINDSTVAGRTNAQENVDKSDLWMASSPVPALN 177

Query: 1343 SMHCSVNQLAG-SGDPTRKPSCLAPKGFEFGEEDFSNDFNLADVDINFENYEELFGMSQN 1167
             +  SV+Q       PT K  C    G    ++    DF++ADVD++ ENYEELFG+SQN
Sbjct: 178  PISSSVDQPTDLVNSPTTKLCC---SGICDDDDLLYEDFSMADVDLSIENYEELFGVSQN 234

Query: 1166 HLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYAEGSSAGKVKLMQAACSD-ASAESAMSA 990
            H EQ  E+ GID++FG+ ++   D+   G   AEGSS   +K MQ ACS+  SA+S +S+
Sbjct: 235  HSEQLLENGGIDSLFGIGNLPGTDASARGAYVAEGSSVVHIKAMQPACSNPISADSIISS 294

Query: 989  KTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSYPS 810
            KT+PN  +  RQAHSSLS+SFSGLTG+S+ GDYQD GVSSMLLM EPPW  P PE+S PS
Sbjct: 295  KTDPNLCFPPRQAHSSLSLSFSGLTGESSTGDYQDCGVSSMLLMGEPPWCSPCPENSLPS 354

Query: 809  ASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTRS 633
            A+RDSAV+RY           KIRY S             RFVKAG+AYDYDP+ QTRS
Sbjct: 355  ANRDSAVLRYKEKKKARKFEKKIRYASRKARADVRKRVKGRFVKAGDAYDYDPLNQTRS 413


>ref|XP_002524598.1| transcription factor, putative [Ricinus communis]
            gi|223536151|gb|EEF37806.1| transcription factor,
            putative [Ricinus communis]
          Length = 414

 Score =  436 bits (1122), Expect = e-120
 Identities = 236/425 (55%), Positives = 288/425 (67%), Gaps = 8/425 (1%)
 Frame = -3

Query: 1880 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1701
            MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALSRRHSRTLLCERCN+QPA +RC
Sbjct: 1    MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALIRC 60

Query: 1700 VSDKMSLCQNCDWNEHCNSASSTTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSD-EY 1524
              +++SLCQ CDW  H NS SS+T H+RQTINCY+GCPSA ELS +WSFVLD PS D E 
Sbjct: 61   ADERLSLCQKCDWMVHGNSNSSST-HKRQTINCYTGCPSASELSSLWSFVLDFPSVDGES 119

Query: 1523 ACEKRMGLMSIDENCVSNYSGRSDSNGNSTVDPSFQGKSKMENEGHFSIWPGSSSVAAGN 1344
             CE+ +GLMSI E+  +N  G  D     T+  +  G + + N          SS   GN
Sbjct: 120  TCEQELGLMSIAEDSSTNTWGPPD----KTISQNVSGAAAVNNACEIP----KSSGCVGN 171

Query: 1343 S-----MHCSVNQLAGSGD-PTRKPSCLAPKGFEFGEEDFSNDFNLADVDINFENYEELF 1182
            S     M  +++  AGS + P  K  C   KG    E+D   DFN+ +VD+N ENYEELF
Sbjct: 172  SSAPQLMPNNLDHPAGSANAPLPKLCCPGTKGPALCEDDLYEDFNMDEVDLNLENYEELF 231

Query: 1181 GMSQNHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYAEGSSAGKVKLMQAACSD-ASAE 1005
            G++ N  E+ FE+ GID++FG++ MSA DS C+G   AEGSSAG V  +Q ACS+ ASA+
Sbjct: 232  GIALNDSEELFENGGIDSLFGMKDMSAADSNCQGAVAAEGSSAGLVNAVQPACSNAASAD 291

Query: 1004 SAMSAKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPE 825
            S MSAKTEP   ++ R  HS+L  SFSGLTG+S+AGDYQD G SSM LM EPPW PP PE
Sbjct: 292  SMMSAKTEPILCFTARPGHSNL--SFSGLTGESSAGDYQDCGASSMFLMGEPPWCPPCPE 349

Query: 824  SSYPSASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMC 645
            SS+ SA+R+ AVMRY           K+RY S             RFVKAG+AYDYDP+ 
Sbjct: 350  SSFSSANRNDAVMRYKEKKKIRKFEKKVRYASRKARADVRRRVKGRFVKAGDAYDYDPLN 409

Query: 644  QTRSC 630
            QTRSC
Sbjct: 410  QTRSC 414


>ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max]
          Length = 446

 Score =  416 bits (1070), Expect = e-114
 Identities = 235/438 (53%), Positives = 289/438 (65%), Gaps = 13/438 (2%)
 Frame = -3

Query: 1904 INW---KV*LRMGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCE 1734
            I+W   KV L+MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALS+RHSRTLLCE
Sbjct: 27   ISWCKRKVSLKMGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCE 86

Query: 1733 RCNTQPASVRCVSDKMSLCQNCDWNEHCNSASSTTSHERQTINCYSGCPSAEELSRIWSF 1554
            RCN+QPA VRCV +K+SLCQNCDW  H  S SS+T H+RQ INCYSGCPSA ELS IWSF
Sbjct: 87   RCNSQPAFVRCVEEKISLCQNCDWLGHGTSTSSST-HKRQAINCYSGCPSAAELSSIWSF 145

Query: 1553 VLDTPSSDEYACEKRMGLMSIDEN-CV------SNYSGRSDSNGNSTVDPSFQGKSKMEN 1395
            VL+  +  E  CE+ +GLMSI+EN CV       N SG  +      ++ S  G S M  
Sbjct: 146  VLEIAAISESTCEQELGLMSINENKCVGVPPEDQNVSGSDEVTDLPALNKSLVGASLM-- 203

Query: 1394 EGHFSIWPGSSSVAAGNSMHCSVNQLAG-SGDPTRKPSCLAPKGFEFGEED-FSNDFNLA 1221
                   P SSS        C ++Q AG + +   K  C A K     E+D   +DFN+ 
Sbjct: 204  -------PESSSEP------CILDQPAGPTNECLPKLYCPATKCPALSEDDNLYDDFNMD 250

Query: 1220 DVDINFENYEELFGMSQNHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYAEGSSAGKVK 1041
            +VD++ ENYEELFGM+ +H E+ FE+ GID++FG + MSA DS C+    AEGSS G+V 
Sbjct: 251  EVDLDLENYEELFGMALSHSEELFENGGIDSLFGTKGMSAGDSNCQEAIAAEGSSVGQVN 310

Query: 1040 LMQAACSD-ASAESAMSAKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSML 864
             MQ ACS+ ASA+S +S KTEP   ++ RQ  S+L  SFSG+TG+S+AGDYQD G SSML
Sbjct: 311  AMQPACSNAASADSILSTKTEPILCFTGRQTQSNL--SFSGVTGESSAGDYQDCGASSML 368

Query: 863  LMDEPPWLPPGPESSYPSASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRF 684
            LM EPPW  P PE+S  SA+R +AVMRY           K+RY S             RF
Sbjct: 369  LMGEPPWFAPCPENSLQSANRSNAVMRYKEKKKTRMFDKKVRYASRKARADVRRRVKGRF 428

Query: 683  VKAGEAYDYDPMCQTRSC 630
            VKAG+ YDYDP+  TRSC
Sbjct: 429  VKAGDVYDYDPLSTTRSC 446


>ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Vitis vinifera]
            gi|296085061|emb|CBI28476.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  410 bits (1055), Expect = e-112
 Identities = 221/420 (52%), Positives = 278/420 (66%), Gaps = 4/420 (0%)
 Frame = -3

Query: 1880 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1701
            MG +CD+CGEQR++VYCRSDAASLCLSCDR+VHSANALSRRHSRTLLCERCN+QPA VRC
Sbjct: 1    MGYICDFCGEQRSIVYCRSDAASLCLSCDRHVHSANALSRRHSRTLLCERCNSQPAFVRC 60

Query: 1700 VSDKMSLCQNCDWNEHCNSASSTTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1521
            + +K+SLCQNCDW  H   +++T+SH+++TINCYSGCPS+E LS +W FVLD PS+    
Sbjct: 61   IEEKISLCQNCDWTGH-GGSTTTSSHKKETINCYSGCPSSEGLSTMWPFVLDLPSTGNST 119

Query: 1520 CEKRMGLMSIDENCVSNYSGRSDSNGNSTVDPSFQGKSKMENEGHFSIWPGSSSVAAGNS 1341
            CE+ + LM ++E    N  G   ++       + +  +   N    SI  GSSSV   NS
Sbjct: 120  CEQGLSLMCLNETSEMNSWGPPGNSSRQDASLTVE-VNDANNVDKSSILIGSSSVPELNS 178

Query: 1340 MHCSVNQLAGSGDPTRKPSCLAPKGFEFG---EEDFSNDFNLADVDINFENYEELFGMSQ 1170
                ++Q +GS D T  P  L P   + G   ++    DFN+ +VD+N ENYEELFG++ 
Sbjct: 179  PSQKLDQPSGSADLT-LPKLLCPGTDDLGFCEDDSLYEDFNMDEVDLNLENYEELFGVAL 237

Query: 1169 NHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYAEGSSAGKVKLMQAACSD-ASAESAMS 993
            +H EQ FE+ GID++FG    S  DS C+G   AEG S G    +Q   S+ ASA+S MS
Sbjct: 238  SHSEQLFENGGIDSLFGKMDTSGADSHCQGAVIAEG-SVGLANAVQPTYSNAASADSIMS 296

Query: 992  AKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSYP 813
            +KTEP   ++ +QAHSSL  SFSGLTG+S+AGDYQD G S   LM EPPW PPGPESS P
Sbjct: 297  SKTEPILCFTGKQAHSSL--SFSGLTGESSAGDYQDCGASPTFLMGEPPWCPPGPESSLP 354

Query: 812  SASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTRS 633
            S SR SAVMRY           ++RY S             RFVKAGEAYDYDP+ +TRS
Sbjct: 355  STSRSSAVMRYREKKKNRKFDKRVRYASRKARADVRQRVKGRFVKAGEAYDYDPISETRS 414


>ref|XP_003542186.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max]
          Length = 409

 Score =  408 bits (1048), Expect = e-111
 Identities = 227/421 (53%), Positives = 279/421 (66%), Gaps = 5/421 (1%)
 Frame = -3

Query: 1880 MGQLCDYCGEQRAMVYCRSDAASLCLSCDRNVHSANALSRRHSRTLLCERCNTQPASVRC 1701
            MG +CD+CG+QR+MVYCRSDAA LCLSCDRNVHSANALS+RHSRTLLCERCN+QPA VRC
Sbjct: 1    MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCERCNSQPAFVRC 60

Query: 1700 VSDKMSLCQNCDWNEHCNSASSTTSHERQTINCYSGCPSAEELSRIWSFVLDTPSSDEYA 1521
            V +K+SLCQNCDW  H  S SS+T H+RQ INCYSGCPSA ELS IWSFVLD  +  E  
Sbjct: 61   VEEKISLCQNCDWLGHGTSTSSST-HKRQAINCYSGCPSAAELSSIWSFVLDIAAISEST 119

Query: 1520 CEKRMGLMSIDENCVSNY--SGRSDSNGNSTVDPSFQGKSKMENEGHFSIWPGSSSVAAG 1347
            CE+ +GLMSI+EN        G++ S  +   D     KS +          G+SS+   
Sbjct: 120  CEQELGLMSINENKSVGVPPEGQNVSGSDEVTDQPALDKSLV----------GTSSMPES 169

Query: 1346 NSMHCSVNQLA-GSGDPTRKPSCLAPKGFEFGEED-FSNDFNLADVDINFENYEELFGMS 1173
            +S    ++Q A  + +   K  C A K     E D   +DFN+ +VD+N ENYEELFGM+
Sbjct: 170  SSKPRILDQPARPANECLSKLYCPATKFPALCENDNLYDDFNMDEVDLNLENYEELFGMA 229

Query: 1172 QNHLEQDFEHNGIDNMFGLRHMSALDSGCEGGPYAEGSSAGKVKLMQAACSD-ASAESAM 996
             +H E+ FE+ GID++FG + MSA D  CE    AEGSS G+V +MQ ACS+ ASA+S +
Sbjct: 230  LSHSEELFENGGIDSLFGTKDMSAGDFSCEDAIAAEGSSVGQVNVMQPACSNAASADSIL 289

Query: 995  SAKTEPNFGYSTRQAHSSLSISFSGLTGDSNAGDYQDSGVSSMLLMDEPPWLPPGPESSY 816
            S KTEP   ++ RQA S+L  SFSG+TGDS+AGDYQD G SSMLLM EPPW  P PE+S 
Sbjct: 290  STKTEPILCFTGRQAQSNL--SFSGVTGDSSAGDYQDCGASSMLLMGEPPWFAPCPENSL 347

Query: 815  PSASRDSAVMRYXXXXXXXXXXXKIRYESXXXXXXXXXXXXXRFVKAGEAYDYDPMCQTR 636
             SA+R +AVMRY           K+RY S             RFVKAG+ YDYDP+  TR
Sbjct: 348  QSANRSNAVMRYKEKKKTRMFDKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSTTR 407

Query: 635  S 633
            S
Sbjct: 408  S 408


Top