BLASTX nr result
ID: Coptis23_contig00004944
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004944 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257... 80 2e-13 emb|CBI30341.3| unnamed protein product [Vitis vinifera] 80 2e-13 ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|2... 78 6e-13 emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera] 77 1e-12 ref|XP_002530525.1| conserved hypothetical protein [Ricinus comm... 75 5e-12 >ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257992 [Vitis vinifera] Length = 911 Score = 79.7 bits (195), Expect = 2e-13 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 16/109 (14%) Frame = +2 Query: 2 FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133 FC KV DL RC M +A N+++ K R L P Sbjct: 32 FCKKVADLEHLWSNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 90 Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280 ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA Sbjct: 91 ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 138 >emb|CBI30341.3| unnamed protein product [Vitis vinifera] Length = 910 Score = 79.7 bits (195), Expect = 2e-13 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 16/109 (14%) Frame = +2 Query: 2 FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133 FC KV DL RC M +A N+++ K R L P Sbjct: 30 FCKKVADLEHLWSNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 88 Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280 ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA Sbjct: 89 ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 136 >ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|222868037|gb|EEF05168.1| predicted protein [Populus trichocarpa] Length = 827 Score = 78.2 bits (191), Expect = 6e-13 Identities = 43/70 (61%), Positives = 51/70 (72%) Frame = +2 Query: 71 YAKYNNNHRCKVGRGCRLPPSASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSD 250 Y K+N +R K R L P +SADDGV VNGTP ++SSD+E +R KLNQSLQ +D SD Sbjct: 3 YKKFNLAYR-KTRRMGHLFPLSSADDGVTVNGTPSASTSSDVEEMRLKLNQSLQGDDSSD 61 Query: 251 GLVQSLHDAA 280 LVQSLHDAA Sbjct: 62 KLVQSLHDAA 71 >emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera] Length = 952 Score = 77.0 bits (188), Expect = 1e-12 Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 16/109 (14%) Frame = +2 Query: 2 FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133 FC KV +L RC M +A N+++ K R L P Sbjct: 62 FCKKVANLEHLWCNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 120 Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280 ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA Sbjct: 121 ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 168 >ref|XP_002530525.1| conserved hypothetical protein [Ricinus communis] gi|223529929|gb|EEF31857.1| conserved hypothetical protein [Ricinus communis] Length = 842 Score = 75.1 bits (183), Expect = 5e-12 Identities = 36/60 (60%), Positives = 45/60 (75%) Frame = +2 Query: 101 KVGRGCRLPPSASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280 K GR L P A+ADDG+ VNG+P ++ SD++ +R KLNQSLQ+ DY D LVQSLHDAA Sbjct: 25 KTGRVAHLSPFATADDGLTVNGSPPASTGSDVDEMRVKLNQSLQDGDYGDRLVQSLHDAA 84