BLASTX nr result

ID: Coptis23_contig00004944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004944
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257...    80   2e-13
emb|CBI30341.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera]    77   1e-12
ref|XP_002530525.1| conserved hypothetical protein [Ricinus comm...    75   5e-12

>ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257992 [Vitis vinifera]
          Length = 911

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
 Frame = +2

Query: 2   FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133
           FC KV DL         RC  M +A   N+++                 K  R   L P 
Sbjct: 32  FCKKVADLEHLWSNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 90

Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280
           ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 91  ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 138


>emb|CBI30341.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
 Frame = +2

Query: 2   FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133
           FC KV DL         RC  M +A   N+++                 K  R   L P 
Sbjct: 30  FCKKVADLEHLWSNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 88

Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280
           ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 89  ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 136


>ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|222868037|gb|EEF05168.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 43/70 (61%), Positives = 51/70 (72%)
 Frame = +2

Query: 71  YAKYNNNHRCKVGRGCRLPPSASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSD 250
           Y K+N  +R K  R   L P +SADDGV VNGTP  ++SSD+E +R KLNQSLQ +D SD
Sbjct: 3   YKKFNLAYR-KTRRMGHLFPLSSADDGVTVNGTPSASTSSDVEEMRLKLNQSLQGDDSSD 61

Query: 251 GLVQSLHDAA 280
            LVQSLHDAA
Sbjct: 62  KLVQSLHDAA 71


>emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera]
          Length = 952

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/109 (46%), Positives = 61/109 (55%), Gaps = 16/109 (14%)
 Frame = +2

Query: 2   FCNKVVDLNQFLHEWGYRCNLMVYAKYNNNHRC----------------KVGRGCRLPPS 133
           FC KV +L         RC  M +A   N+++                 K  R   L P 
Sbjct: 62  FCKKVANLEHLWCNSRRRC-FMRHAMLENDNQSFRHQLGQFRILRPTFPKSRRMGNLFPL 120

Query: 134 ASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280
           ASADDGV VNG+PQ ++SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 121 ASADDGVTVNGSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 168


>ref|XP_002530525.1| conserved hypothetical protein [Ricinus communis]
           gi|223529929|gb|EEF31857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 842

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = +2

Query: 101 KVGRGCRLPPSASADDGVKVNGTPQTNSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 280
           K GR   L P A+ADDG+ VNG+P  ++ SD++ +R KLNQSLQ+ DY D LVQSLHDAA
Sbjct: 25  KTGRVAHLSPFATADDGLTVNGSPPASTGSDVDEMRVKLNQSLQDGDYGDRLVQSLHDAA 84


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