BLASTX nr result

ID: Coptis23_contig00004943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004943
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257...    84   2e-14
emb|CBI30341.3| unnamed protein product [Vitis vinifera]               84   2e-14
emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera]    80   1e-13
ref|XP_002309411.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002276024.2| PREDICTED: uncharacterized protein LOC100257992 [Vitis vinifera]
          Length = 911

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
 Frame = +2

Query: 62  FFYNKVVDLNHFLHEWGYPRNRCRMRCNVMVYAKYNHNHRCKVGRGWRLPPSAS------ 223
           FF  KV DL H    W   R RC MR  ++     N + R ++G+   L P+        
Sbjct: 31  FFCKKVADLEHL---WSNSRRRCFMRHAML--ENDNQSFRHQLGQFRILRPTFPKSRRMG 85

Query: 224 -----ASADDGVTVNNGTPQTSSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 373
                ASADDGVTVN G+PQ S+SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 86  NLFPLASADDGVTVN-GSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 138


>emb|CBI30341.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
 Frame = +2

Query: 62  FFYNKVVDLNHFLHEWGYPRNRCRMRCNVMVYAKYNHNHRCKVGRGWRLPPSAS------ 223
           FF  KV DL H    W   R RC MR  ++     N + R ++G+   L P+        
Sbjct: 29  FFCKKVADLEHL---WSNSRRRCFMRHAML--ENDNQSFRHQLGQFRILRPTFPKSRRMG 83

Query: 224 -----ASADDGVTVNNGTPQTSSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 373
                ASADDGVTVN G+PQ S+SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 84  NLFPLASADDGVTVN-GSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 136


>emb|CAN66103.1| hypothetical protein VITISV_009607 [Vitis vinifera]
          Length = 952

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 56/115 (48%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
 Frame = +2

Query: 62  FFYNKVVDLNHFLHEWGYPRNRCRMRCNVMVYAKYNHNHRCKVGRGWRLPPSAS------ 223
           FF  KV +L H    W   R RC MR  ++     N + R ++G+   L P+        
Sbjct: 61  FFCKKVANLEHL---WCNSRRRCFMRHAML--ENDNQSFRHQLGQFRILRPTFPKSRRMG 115

Query: 224 -----ASADDGVTVNNGTPQTSSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 373
                ASADDGVTVN G+PQ S+SSD E +R KLNQSLQ EDY +GLVQSLHDAA
Sbjct: 116 NLFPLASADDGVTVN-GSPQASTSSDFEEMRVKLNQSLQGEDY-NGLVQSLHDAA 168


>ref|XP_002309411.1| predicted protein [Populus trichocarpa] gi|222855387|gb|EEE92934.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 51/112 (45%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
 Frame = +2

Query: 74  KVVDLNHFLHEWGYPRNRCRMRCNV------------MVYAKYNHNHRCKVGRGWRLPPS 217
           +V  L++ L  WG  R R  M+  +            + Y K N  H  K  R   L P 
Sbjct: 33  RVAHLDYLLINWGNSRKRYPMKHTLWRNGNHSLDYQSIGYKKLNLTHM-KTRRTGHLFPL 91

Query: 218 ASASADDGVTVNNGTPQTSSSSDMEGLRAKLNQSLQNEDYSDGLVQSLHDAA 373
           AS   DDGVTVN GTP  S++SD+E +R +LNQSLQ ED  D LVQSLHDAA
Sbjct: 92  ASG--DDGVTVN-GTPSASANSDVEDMRVQLNQSLQGEDSGDKLVQSLHDAA 140


>ref|XP_002323407.1| predicted protein [Populus trichocarpa] gi|222868037|gb|EEF05168.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/73 (60%), Positives = 50/73 (68%)
 Frame = +2

Query: 155 YAKYNHNHRCKVGRGWRLPPSASASADDGVTVNNGTPQTSSSSDMEGLRAKLNQSLQNED 334
           Y K+N  +R     G   P S   SADDGVTVN GTP  S+SSD+E +R KLNQSLQ +D
Sbjct: 3   YKKFNLAYRKTRRMGHLFPLS---SADDGVTVN-GTPSASTSSDVEEMRLKLNQSLQGDD 58

Query: 335 YSDGLVQSLHDAA 373
            SD LVQSLHDAA
Sbjct: 59  SSDKLVQSLHDAA 71


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