BLASTX nr result

ID: Coptis23_contig00004940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004940
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533499.1| Spotted leaf protein, putative [Ricinus comm...   448   e-123
ref|XP_002301810.1| predicted protein [Populus trichocarpa] gi|2...   445   e-122
ref|XP_002331359.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002263607.1| PREDICTED: U-box domain-containing protein 9...   421   e-115
ref|XP_002270882.1| PREDICTED: U-box domain-containing protein 9...   419   e-114

>ref|XP_002533499.1| Spotted leaf protein, putative [Ricinus communis]
            gi|223526643|gb|EEF28886.1| Spotted leaf protein,
            putative [Ricinus communis]
          Length = 456

 Score =  448 bits (1152), Expect = e-123
 Identities = 238/372 (63%), Positives = 288/372 (77%), Gaps = 2/372 (0%)
 Frame = +2

Query: 164  MAKTEVKESGDGVVMKVTELKKELKKMVNAIIDDEDGCGVELFDRVNETLVALKECKFVK 343
            MAKT V +S   V+ K TELKKEL+K V +I+DD+D   +E  D+  ETL AL++ K  K
Sbjct: 1    MAKTGVFDSDPVVMSKATELKKELQKFVKSIVDDDD-YRIETIDQAKETLCALRDLKIKK 59

Query: 344  KSSSPSLKFDSFADFPVKFRCPISNELMTDPVILATGQTYERQFIQAWLDAGYRTCPMTQ 523
            +S S  LK       P +F+CP+S ELM DPVILATGQTY+R FIQ WL AG RTCP+TQ
Sbjct: 60   RSLS--LKLRETVSCPDEFKCPLSKELMKDPVILATGQTYDRPFIQKWLRAGNRTCPLTQ 117

Query: 524  QVLSHTNLTSNYLVQEMILEWCKNKGIELPNPVDSTYKQGVTKGEKDHLEXXXXXXXXXX 703
            QVLSHT LT N+L++EMI +WCKN+G+ELP+PV     +G+T+ E+D             
Sbjct: 118  QVLSHTVLTPNHLIREMISQWCKNQGLELPDPVRQGNGEGITEAERDQF-LSLVGKMSSE 176

Query: 704  XPEQKQAAKELRSLTKRMPSFRTLFGENRDAIPQLLVPL--SKGNAHRYPDLQEDLITTV 877
             PEQ+ AAKELR LTKRMPSFR LFGE+ DAIPQLL PL  SK  +    DLQED+ITT+
Sbjct: 177  LPEQRAAAKELRRLTKRMPSFRALFGESVDAIPQLLNPLLASKSASEVQADLQEDVITTL 236

Query: 878  LNLSIHDENKKLVAETTEAIPLLIESLRAGTIETRTNAAAALFTLSALDPNKSIIGEAGA 1057
            LNLSIHD NKKLVAET   IPLLIE+LR+GTI+TRTNAAAALFTLSALD NKS+IG++GA
Sbjct: 237  LNLSIHDNNKKLVAETPAVIPLLIEALRSGTIDTRTNAAAALFTLSALDSNKSLIGKSGA 296

Query: 1058 LKPLIDLLEEGHPIAMKDVASAIFNLCIIHENKSRAVRDGAVKVIMQKIIDHINVDELLA 1237
            LKPLIDLLEEGHP+AMKDVASAIF LC +HENK+RAVRDGAV+V+++KI+D + VDELLA
Sbjct: 297  LKPLIDLLEEGHPLAMKDVASAIFTLCFVHENKARAVRDGAVRVLLKKIMDGMLVDELLA 356

Query: 1238 ILAVLSGHEKAV 1273
            +LA+LS H KA+
Sbjct: 357  MLAILSSHHKAI 368


>ref|XP_002301810.1| predicted protein [Populus trichocarpa] gi|222843536|gb|EEE81083.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  445 bits (1145), Expect = e-122
 Identities = 238/372 (63%), Positives = 289/372 (77%), Gaps = 2/372 (0%)
 Frame = +2

Query: 164  MAKTEVKESGDGVVMKVTELKKELKKMVNAIIDDEDGCGVELFDRVNETLVALKECKFVK 343
            MAKT V +S   V+ K  ELKKEL+K+V  I+DDED    EL D+  ETL ALK  K  +
Sbjct: 1    MAKTGVFKSDPMVMTKAMELKKELQKLVRNIVDDED-YRTELIDQARETLFALKGLKVKR 59

Query: 344  KSSSPSLKFDSFADFPVKFRCPISNELMTDPVILATGQTYERQFIQAWLDAGYRTCPMTQ 523
            +SSS  LK       P +F+CP+S ELM DPV+LATGQTY+R FIQ WL AG RTCP+TQ
Sbjct: 60   RSSS--LKLRETVLCPEEFKCPLSKELMRDPVVLATGQTYDRPFIQKWLKAGNRTCPLTQ 117

Query: 524  QVLSHTNLTSNYLVQEMILEWCKNKGIELPNPVDSTYKQGVTKGEKDHLEXXXXXXXXXX 703
            QVLSHT LT N L++EMI +WCK++G+ELP+   +  + G+T+ ++DH            
Sbjct: 118  QVLSHTILTPNLLIREMISQWCKSQGLELPDLSQNVNEDGITEADRDHF-LSLLEKMSLT 176

Query: 704  XPEQKQAAKELRSLTKRMPSFRTLFGENRDAIPQLLVPLSKGNA--HRYPDLQEDLITTV 877
             PEQK AA+ELR LTKRMPSFR LF E+ +AIPQLL PLS+G +    YPDLQED+ITT+
Sbjct: 177  LPEQKDAARELRLLTKRMPSFRALFSESLEAIPQLLRPLSEGKSGSSMYPDLQEDIITTL 236

Query: 878  LNLSIHDENKKLVAETTEAIPLLIESLRAGTIETRTNAAAALFTLSALDPNKSIIGEAGA 1057
            LNLSIHD NKKLVAET   IPLL+E+LR+G+IETRTNAAAALFTLSALD NK++IG++GA
Sbjct: 237  LNLSIHDNNKKLVAETPMVIPLLMEALRSGSIETRTNAAAALFTLSALDSNKTLIGKSGA 296

Query: 1058 LKPLIDLLEEGHPIAMKDVASAIFNLCIIHENKSRAVRDGAVKVIMQKIIDHINVDELLA 1237
            LKPLIDLLEEGHP AMKDVASAIFNLCIIHENK+RAVRDGA+KVI+ KI++ ++VDELLA
Sbjct: 297  LKPLIDLLEEGHPSAMKDVASAIFNLCIIHENKARAVRDGALKVILTKIMNGMHVDELLA 356

Query: 1238 ILAVLSGHEKAV 1273
            ILAVL+ H+K V
Sbjct: 357  ILAVLASHQKVV 368


>ref|XP_002331359.1| predicted protein [Populus trichocarpa] gi|222874397|gb|EEF11528.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  423 bits (1088), Expect = e-116
 Identities = 229/370 (61%), Positives = 279/370 (75%)
 Frame = +2

Query: 164  MAKTEVKESGDGVVMKVTELKKELKKMVNAIIDDEDGCGVELFDRVNETLVALKECKFVK 343
            MAK+ V E+    V K TELKKEL+K+V AI+D+ED   VE+ D     L  LKE KF K
Sbjct: 1    MAKSGVLETIPCTVTKATELKKELEKLVKAILDEED-YRVEVTDEAMRVLSVLKELKFKK 59

Query: 344  KSSSPSLKFDSFADFPVKFRCPISNELMTDPVILATGQTYERQFIQAWLDAGYRTCPMTQ 523
                 SLK       P +F+CPIS E+M DPV+LATGQTY+  FIQ WL+ G+RTCP TQ
Sbjct: 60   -----SLKIVDDTVLPEEFKCPISREIMGDPVVLATGQTYDLPFIQRWLNEGHRTCPQTQ 114

Query: 524  QVLSHTNLTSNYLVQEMILEWCKNKGIELPNPVDSTYKQGVTKGEKDHLEXXXXXXXXXX 703
            QVLSHT LT N+LV+EMI +WCK +GIELP PV     +  T  ++ HL+          
Sbjct: 115  QVLSHTILTPNHLVREMISQWCKERGIELPRPVKDV-DEVRTDADRGHLKSLLEKMSSSL 173

Query: 704  XPEQKQAAKELRSLTKRMPSFRTLFGENRDAIPQLLVPLSKGNAHRYPDLQEDLITTVLN 883
              +QK+AAKELR LTKRMPSFR LF ++ DAIP+LL PLS G A+ +PDLQEDLITTVLN
Sbjct: 174  S-DQKEAAKELRLLTKRMPSFRALFSDSTDAIPKLLNPLSPGRANTHPDLQEDLITTVLN 232

Query: 884  LSIHDENKKLVAETTEAIPLLIESLRAGTIETRTNAAAALFTLSALDPNKSIIGEAGALK 1063
            LSIHD NK+L AE    IPLL+ES+++GTIETR+NAAAA+F+LSALD NK IIG++GALK
Sbjct: 233  LSIHDNNKRLAAENPLVIPLLVESVKSGTIETRSNAAAAIFSLSALDSNKLIIGKSGALK 292

Query: 1064 PLIDLLEEGHPIAMKDVASAIFNLCIIHENKSRAVRDGAVKVIMQKIIDHINVDELLAIL 1243
            PLIDLLEEGHP+AMKD ASAIFNLC++ ENK RAVR+GAV+VI++KI+D I VDELLAIL
Sbjct: 293  PLIDLLEEGHPLAMKDAASAIFNLCLVLENKGRAVREGAVRVILKKIMDCIFVDELLAIL 352

Query: 1244 AVLSGHEKAV 1273
            A+L+ H+KAV
Sbjct: 353  AMLASHQKAV 362


>ref|XP_002263607.1| PREDICTED: U-box domain-containing protein 9 [Vitis vinifera]
            gi|296083515|emb|CBI23501.3| unnamed protein product
            [Vitis vinifera]
          Length = 449

 Score =  421 bits (1082), Expect = e-115
 Identities = 225/370 (60%), Positives = 281/370 (75%)
 Frame = +2

Query: 164  MAKTEVKESGDGVVMKVTELKKELKKMVNAIIDDEDGCGVELFDRVNETLVALKECKFVK 343
            MAKT V E+      +V ELKKEL+++V +I++D+D   VE+ DR  E L ++K+ K VK
Sbjct: 1    MAKTGVLETDP----RVAELKKELQRLVKSIVEDDD-YSVEVMDRAREALCSIKDLK-VK 54

Query: 344  KSSSPSLKFDSFADFPVKFRCPISNELMTDPVILATGQTYERQFIQAWLDAGYRTCPMTQ 523
            +S S  LK      FP +FRCP+S E+M DPVILATGQTY+R FIQ WL AG RTCP+TQ
Sbjct: 55   RSMS--LKLHGPHSFPEEFRCPLSREMMRDPVILATGQTYDRPFIQKWLKAGNRTCPLTQ 112

Query: 524  QVLSHTNLTSNYLVQEMILEWCKNKGIELPNPVDSTYKQGVTKGEKDHLEXXXXXXXXXX 703
            QVLSHT LT N+L++EMI +WC++ GIEL +P   + +  +   ++              
Sbjct: 113  QVLSHTMLTPNHLIREMISQWCQSHGIELTDPDQYSNEDQIMDADRSRFIDLLEKMSSSA 172

Query: 704  XPEQKQAAKELRSLTKRMPSFRTLFGENRDAIPQLLVPLSKGNAHRYPDLQEDLITTVLN 883
              EQK+AAKELR LTKRMPSFR LFGE+ DAIPQLL P S+     +PDLQEDLITT+LN
Sbjct: 173  L-EQKEAAKELRLLTKRMPSFRALFGESLDAIPQLLNPFSQNKGGIHPDLQEDLITTLLN 231

Query: 884  LSIHDENKKLVAETTEAIPLLIESLRAGTIETRTNAAAALFTLSALDPNKSIIGEAGALK 1063
            LSIHD NKKLVAET   IPLL+++L++GTIETR+NAAA +FTLSALD NK++IG++G LK
Sbjct: 232  LSIHDNNKKLVAETPMVIPLLMDALKSGTIETRSNAAATIFTLSALDSNKALIGKSGVLK 291

Query: 1064 PLIDLLEEGHPIAMKDVASAIFNLCIIHENKSRAVRDGAVKVIMQKIIDHINVDELLAIL 1243
            PLIDLLEEGHP  MKDVASAIFNLCIIHENKSRAV +GAVKV+M+KI++  +VDELLAIL
Sbjct: 292  PLIDLLEEGHPSVMKDVASAIFNLCIIHENKSRAVHEGAVKVLMKKIMNQTHVDELLAIL 351

Query: 1244 AVLSGHEKAV 1273
            A+LS H+KA+
Sbjct: 352  AMLSTHQKAI 361


>ref|XP_002270882.1| PREDICTED: U-box domain-containing protein 9 [Vitis vinifera]
            gi|296085175|emb|CBI28670.3| unnamed protein product
            [Vitis vinifera]
          Length = 455

 Score =  419 bits (1076), Expect = e-114
 Identities = 229/371 (61%), Positives = 280/371 (75%), Gaps = 1/371 (0%)
 Frame = +2

Query: 164  MAKTEVKESGDGVVMKVTE-LKKELKKMVNAIIDDEDGCGVELFDRVNETLVALKECKFV 340
            MAK  V E+   +  K TE LKKEL+++V+ I+D+++ C  +  D+  + L AL++ KF 
Sbjct: 1    MAKFGVLETDPSMAAKATEELKKELQRLVSRIVDEDESCA-DTTDKALKILFALRDFKF- 58

Query: 341  KKSSSPSLKFDSFADFPVKFRCPISNELMTDPVILATGQTYERQFIQAWLDAGYRTCPMT 520
            K S    ++ ++ A  P +FRCPIS +LM DPV++ATGQTY+R FIQ WL  G+RTCP T
Sbjct: 59   KGSLDFGVETENPA-LPQEFRCPISKQLMRDPVVVATGQTYDRPFIQKWLKDGHRTCPRT 117

Query: 521  QQVLSHTNLTSNYLVQEMILEWCKNKGIELPNPVDSTYKQGVTKGEKDHLEXXXXXXXXX 700
            QQVLSHT LT N LV+EMI EWCK  GIELP PV+   ++ +T  ++ HL          
Sbjct: 118  QQVLSHTILTPNNLVREMISEWCKEHGIELPKPVEDVDEEVITDADRGHLNSLLERMSSS 177

Query: 701  XXPEQKQAAKELRSLTKRMPSFRTLFGENRDAIPQLLVPLSKGNAHRYPDLQEDLITTVL 880
               +QK+AA+ELR LTKRMPSFR LFGE  DA+PQLL PLS       P+LQEDLITTVL
Sbjct: 178  AS-DQKEAARELRLLTKRMPSFRALFGECTDAVPQLLSPLSPDAVDVDPELQEDLITTVL 236

Query: 881  NLSIHDENKKLVAETTEAIPLLIESLRAGTIETRTNAAAALFTLSALDPNKSIIGEAGAL 1060
            NLSIHD NKKLVAE   AIP+LIESL++GTIETRTNAAAALFTLSALD NK IIG++GAL
Sbjct: 237  NLSIHDNNKKLVAEDPMAIPVLIESLKSGTIETRTNAAAALFTLSALDSNKLIIGKSGAL 296

Query: 1061 KPLIDLLEEGHPIAMKDVASAIFNLCIIHENKSRAVRDGAVKVIMQKIIDHINVDELLAI 1240
            KPL+DLLEEGHP+AMKDVASAIFNLCI+ ENK RAV DGAV VI++KI+D I VDELLAI
Sbjct: 297  KPLLDLLEEGHPLAMKDVASAIFNLCIVLENKGRAVHDGAVTVILKKIMDGILVDELLAI 356

Query: 1241 LAVLSGHEKAV 1273
            LA+LS H++AV
Sbjct: 357  LAMLSSHQRAV 367


Top