BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004938
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   105   4e-21
ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-...    99   4e-19
ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...    99   5e-19
ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Gly...    93   2e-17
ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  105 bits (262), Expect = 4e-21
 Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 7/117 (5%)
 Frame = -1

Query: 332 KQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQLTD---VQCGIIVTF----GGEMQV 174
           K+AAN SS RPVSV+RHWLT EVQVR+AT++G D+      VQCGI+VT     GGEMQV
Sbjct: 189 KRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGIVVTCAGKEGGEMQV 248

Query: 173 REVSLQVENMDGINLNGKDSLGILEKAIXXXXXXXXXXXXXXXXXXXYVTIMRERKE 3
           REV+LQVE+M+G +LNGK+SL IL++A+                   Y+ +M ER+E
Sbjct: 249 REVNLQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGERRE 305


>ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-like [Glycine max]
          Length = 335

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/86 (59%), Positives = 67/86 (77%), Gaps = 4/86 (4%)
 Frame = -1

Query: 335 GKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQL-TDVQ---CGIIVTFGGEMQVRE 168
           GK+A N SS R VSV+RHWL+ EV+ RFAT++G  +  T V+   C + VTFGGEMQVRE
Sbjct: 188 GKRAVNVSSGRVVSVERHWLSGEVKARFATVVGGGERGTAVEVALCSVTVTFGGEMQVRE 247

Query: 167 VSLQVENMDGINLNGKDSLGILEKAI 90
             LQ+E+MDG+ LNG+DSLGIL++A+
Sbjct: 248 ACLQMEDMDGMFLNGRDSLGILQRAL 273


>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 6/88 (6%)
 Frame = -1

Query: 335 GKQAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQLTD--VQCGIIVTFG----GEMQV 174
           G++AAN SS + VSV+RHWL+ EVQ+RFA+ILG D+ T   VQCGI+VT      GEMQV
Sbjct: 192 GRRAANLSSHKAVSVERHWLSGEVQLRFASILGGDKGTTELVQCGIVVTCDGSKTGEMQV 251

Query: 173 REVSLQVENMDGINLNGKDSLGILEKAI 90
            EVSLQ+E+MDG++L GK+SL IL KA+
Sbjct: 252 TEVSLQLEDMDGVHLMGKESLVILHKAL 279


>ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Glycine max]
          Length = 335

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/86 (55%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = -1

Query: 335 GKQAANFSSWRPVSVQRHWLTNEVQVRFATIL-GVDQLTDVQ---CGIIVTFGGEMQVRE 168
           GK+A N SS   VSV+RHWL+ EV+VRFAT++ G ++ T  +   C + VTFG EMQVRE
Sbjct: 189 GKRAVNVSSGTAVSVERHWLSGEVKVRFATVVDGGERGTPAEVALCSVTVTFGNEMQVRE 248

Query: 167 VSLQVENMDGINLNGKDSLGILEKAI 90
             LQ+E+MDG+ LNG++SLGIL++A+
Sbjct: 249 ACLQMEDMDGMFLNGRESLGILKRAL 274


>ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|222837892|gb|EEE76257.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 9/85 (10%)
 Frame = -1

Query: 329 QAANFSSWRPVSVQRHWLTNEVQVRFATILGVDQL----TDVQCGIIVTFGG-----EMQ 177
           ++ N SS +PVSVQRHWL+ EV  RFAT+L   +       VQCGI+VT GG     EMQ
Sbjct: 198 RSVNLSSHKPVSVQRHWLSGEVHARFATVLAAGERGSASESVQCGIVVTCGGGAQGGEMQ 257

Query: 176 VREVSLQVENMDGINLNGKDSLGIL 102
           VR VSLQVE+MDG+ LNGK SLG+L
Sbjct: 258 VRGVSLQVEDMDGVFLNGKGSLGVL 282