BLASTX nr result
ID: Coptis23_contig00004931
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004931 (566 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253... 76 3e-12 ref|XP_002525522.1| nucleic acid binding protein, putative [Rici... 69 5e-10 ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-08 ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800... 64 2e-08 ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786... 63 4e-08 >ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera] Length = 772 Score = 76.3 bits (186), Expect = 3e-12 Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +1 Query: 10 YQGPADTGYSNAPTSAYGAPPSAQAGYVQPASNQPAYEQ--XXXXXXXXXXXXXXXXXFV 183 YQG AD Y++ P SAYGA PS Q GYVQP QP+Y+Q + Sbjct: 691 YQGSADPTYNSGPASAYGAQPSGQPGYVQPTPTQPSYDQSIPAQSGGYGAVPATAPVGYG 750 Query: 184 KTLSPQPVYGQYDSTQMYG 240 K+LSPQP Y QYD+TQMYG Sbjct: 751 KSLSPQPGYPQYDATQMYG 769 >ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis] gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis] Length = 798 Score = 68.9 bits (167), Expect = 5e-10 Identities = 36/79 (45%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = +1 Query: 10 YQGPADTGYSNAPTSAYGAPPSAQAGYVQPASNQPAYEQ---XXXXXXXXXXXXXXXXXF 180 YQG D Y+ P SAY AP S Q GY QP QP+Y+Q + Sbjct: 716 YQGSQDPAYATGPGSAYAAPASGQQGYAQPTPTQPSYDQSVPQSTAYAAAAPPASAPVSY 775 Query: 181 VKTLSPQPVYGQYDSTQMY 237 KT+SPQP Y QYDSTQMY Sbjct: 776 GKTVSPQPGYPQYDSTQMY 794 >ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|222862385|gb|EEE99891.1| predicted protein [Populus trichocarpa] Length = 581 Score = 64.7 bits (156), Expect = 1e-08 Identities = 38/77 (49%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +1 Query: 10 YQGPADTGYSNAPTSAYGAPPSAQAGYVQPASNQPAYEQXXXXXXXXXXXXXXXXX-FVK 186 YQG D Y +AP AYGAP S Q GY QPA QP+Y+Q + K Sbjct: 504 YQGSQDPAYGSAP--AYGAPASQQ-GYAQPAPTQPSYDQSVPQSAGYGAAPATAPVGYGK 560 Query: 187 TLSPQPVYGQYDSTQMY 237 T+SPQP Y QYDSTQMY Sbjct: 561 TVSPQPGYPQYDSTQMY 577 >ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max] Length = 793 Score = 63.5 bits (153), Expect = 2e-08 Identities = 37/79 (46%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +1 Query: 10 YQGPADTGYSNAPTSAYG-APPSAQAGYVQPASNQPAYEQXXXXXXXXXXXXXXXXX-FV 183 YQ P D GYS AY A PS Q GYVQP Q YEQ + Sbjct: 712 YQAPQDPGYSTGAAPAYSTAQPSGQPGYVQPTPTQTGYEQSNTQPAGYAAVPASASAVYG 771 Query: 184 KTLSPQPVYGQYDSTQMYG 240 KTLSPQP QYDSTQ+YG Sbjct: 772 KTLSPQPAAYQYDSTQVYG 790 >ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max] Length = 794 Score = 62.8 bits (151), Expect = 4e-08 Identities = 38/80 (47%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +1 Query: 10 YQGPADTGYSNAPTSAYG-APPSAQAGYVQPASNQPAYEQ-XXXXXXXXXXXXXXXXXFV 183 YQ P D GYS AY A PS Q GYVQP Q YEQ + Sbjct: 712 YQAPQDPGYSTGAAPAYSTAQPSGQPGYVQPTPTQTGYEQSNTQPAGYAAVPASAPAAYG 771 Query: 184 KTLSPQP-VYGQYDSTQMYG 240 KTLSPQP Y QYDSTQ+YG Sbjct: 772 KTLSPQPAAYPQYDSTQVYG 791