BLASTX nr result

ID: Coptis23_contig00004923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004923
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633689.1| PREDICTED: peptidyl-prolyl cis-trans isomera...    94   2e-17
gb|ACG70968.1| cyclophilin [Ziziphus jujuba]                           93   2e-17
gb|AFK44397.1| unknown [Lotus japonicus]                               92   4e-17
gb|AER12108.1| CYP [Gossypium hirsutum]                                92   6e-17
ref|XP_002325319.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17

>ref|XP_003633689.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like [Vitis
           vinifera]
          Length = 235

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/123 (44%), Positives = 61/123 (49%)
 Frame = +1

Query: 28  KLKREKKMANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENXXXXXXXXXXXXXXXXXX 207
           K+    KM+NPKVFFDI +GK KAGRIVMELF DVTPKTAEN                  
Sbjct: 55  KVFESVKMSNPKVFFDILVGKMKAGRIVMELFADVTPKTAEN------------------ 96

Query: 208 XXXXXXXXXXXXXXXXXXXXXXXRSGKPMHYKGSKFHRIIPSFMCQXXXXXXXXXXXXES 387
                                   SGKP+HYKGS FHRIIP+FMCQ            ES
Sbjct: 97  -----------FRALCTGEKGIGMSGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGES 145

Query: 388 IYG 396
           I+G
Sbjct: 146 IHG 148


>gb|ACG70968.1| cyclophilin [Ziziphus jujuba]
          Length = 174

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/116 (46%), Positives = 58/116 (50%)
 Frame = +1

Query: 49  MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENXXXXXXXXXXXXXXXXXXXXXXXXX 228
           M+NPKVFFDI IGK KAGR+VMELF DVTPKTAEN                         
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRVLCTGEKGIGI------------ 48

Query: 229 XXXXXXXXXXXXXXXXRSGKPMHYKGSKFHRIIPSFMCQXXXXXXXXXXXXESIYG 396
                            SGKP+HYKGS FHRIIP+FMCQ            ESIYG
Sbjct: 49  -----------------SGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYG 87


>gb|AFK44397.1| unknown [Lotus japonicus]
          Length = 174

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/116 (46%), Positives = 58/116 (50%)
 Frame = +1

Query: 49  MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENXXXXXXXXXXXXXXXXXXXXXXXXX 228
           M NPKVFFDIAIGKTKAGRI+MELF DVTPKTAEN                         
Sbjct: 1   MTNPKVFFDIAIGKTKAGRILMELFADVTPKTAEN------------------------- 35

Query: 229 XXXXXXXXXXXXXXXXRSGKPMHYKGSKFHRIIPSFMCQXXXXXXXXXXXXESIYG 396
                           +SGK +H+KGS FHRIIP FMCQ            ESIYG
Sbjct: 36  ----FRALCTGEKGIGKSGKGLHFKGSAFHRIIPDFMCQGGDFTRGNGTGGESIYG 87


>gb|AER12108.1| CYP [Gossypium hirsutum]
          Length = 174

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 53/116 (45%), Positives = 57/116 (49%)
 Frame = +1

Query: 49  MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENXXXXXXXXXXXXXXXXXXXXXXXXX 228
           M+NPKVFFDI IGK KAGR+VMELF DV PKTAEN                         
Sbjct: 1   MSNPKVFFDILIGKAKAGRVVMELFADVVPKTAEN------------------------- 35

Query: 229 XXXXXXXXXXXXXXXXRSGKPMHYKGSKFHRIIPSFMCQXXXXXXXXXXXXESIYG 396
                           + GKP+HYKGS FHRIIPSFMCQ            ESIYG
Sbjct: 36  ----FRALCTGEKGVGQCGKPLHYKGSAFHRIIPSFMCQGGDFTRGNGTGGESIYG 87


>ref|XP_002325319.1| predicted protein [Populus trichocarpa]
           gi|224145735|ref|XP_002325747.1| predicted protein
           [Populus trichocarpa] gi|224145746|ref|XP_002325751.1|
           predicted protein [Populus trichocarpa]
           gi|118482658|gb|ABK93248.1| unknown [Populus
           trichocarpa] gi|222862194|gb|EEE99700.1| predicted
           protein [Populus trichocarpa]
           gi|222862622|gb|EEF00129.1| predicted protein [Populus
           trichocarpa] gi|222862626|gb|EEF00133.1| predicted
           protein [Populus trichocarpa]
          Length = 174

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 53/116 (45%), Positives = 57/116 (49%)
 Frame = +1

Query: 49  MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENXXXXXXXXXXXXXXXXXXXXXXXXX 228
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAEN                         
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADATPKTAEN------------------------- 35

Query: 229 XXXXXXXXXXXXXXXXRSGKPMHYKGSKFHRIIPSFMCQXXXXXXXXXXXXESIYG 396
                            +GKP+HYKGS FHRIIP+FMCQ            ESIYG
Sbjct: 36  ----FRALCTGEKGIGNAGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYG 87


Top