BLASTX nr result

ID: Coptis23_contig00004922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004922
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM45078.1| chorismate mutase 01 [Vitis vinifera]                  289   9e-76
ref|XP_002283293.2| PREDICTED: chorismate mutase, chloroplastic-...   289   9e-76
emb|CAN82251.1| hypothetical protein VITISV_036494 [Vitis vinifera]   289   1e-75
ref|XP_004145501.1| PREDICTED: chorismate mutase, chloroplastic-...   280   6e-73
ref|XP_002515429.1| chorismate mutase cm2, putative [Ricinus com...   279   1e-72

>gb|ACM45078.1| chorismate mutase 01 [Vitis vinifera]
          Length = 248

 Score =  289 bits (740), Expect = 9e-76
 Identities = 146/242 (60%), Positives = 175/242 (72%), Gaps = 4/242 (1%)
 Frame = +2

Query: 248 LSLESVRESLISQEDTIVLSLIERAQFPCNSPAYDPLSSPA---LCGSLLEYIVKETEII 418
           + LESVR+SLI QEDTIV SLIERA+FP NS AY P  +        S L   V+E+E +
Sbjct: 1   MDLESVRDSLIRQEDTIVFSLIERAKFPINSWAYSPPQNGVDAFSASSFLHSFVRESETL 60

Query: 419 HAKVGRYTSPEDHPFFPNDLPLPLTPPHNYPQVLHPAAAFINVNDIIWKMYFDQFLPLFT 598
           HAK GRY +PE++PFFP+DLP  + P H+Y QVLHPA + INVN  IW +Y ++ LPLF 
Sbjct: 61  HAKAGRYENPEENPFFPDDLPPSMVPTHDYKQVLHPAGSSINVNKTIWDIYLNKLLPLFA 120

Query: 599 AEGDDGNYGSTAECDLKCLQALSRRIHYGKFVAEVKFRDAPQDYGPAIHAQDKDTLMKLL 778
           AEGDDGNYG TA CDL CLQA+SRRIHYGKFVAEVKF+++P++YGPAIH QD+  LMK+L
Sbjct: 121 AEGDDGNYGLTAACDLACLQAISRRIHYGKFVAEVKFKESPEEYGPAIHDQDRAGLMKML 180

Query: 779 TFXXXXXXXXXXXXXXXXXFGQEVSLDDKGDTGK-YKVDPSLVSRLYGEWVMPLTKLVQV 955
           TF                 FGQEV+L D   + + YKVDPS+VSRLY EWVMPLTK VQV
Sbjct: 181 TFEAVEEMVKKRVEKKATVFGQEVNLSDNSKSKETYKVDPSVVSRLYEEWVMPLTKQVQV 240

Query: 956 EY 961
           EY
Sbjct: 241 EY 242


>ref|XP_002283293.2| PREDICTED: chorismate mutase, chloroplastic-like [Vitis vinifera]
           gi|296082131|emb|CBI21136.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  289 bits (740), Expect = 9e-76
 Identities = 146/242 (60%), Positives = 175/242 (72%), Gaps = 4/242 (1%)
 Frame = +2

Query: 248 LSLESVRESLISQEDTIVLSLIERAQFPCNSPAYDPLSSPA---LCGSLLEYIVKETEII 418
           + LESVR+SLI QEDTIV SLIERA+FP NS AY P  +        S L   V+E+E +
Sbjct: 1   MDLESVRDSLIRQEDTIVFSLIERAKFPINSWAYSPPQNGVDAFSASSFLHSFVRESEAL 60

Query: 419 HAKVGRYTSPEDHPFFPNDLPLPLTPPHNYPQVLHPAAAFINVNDIIWKMYFDQFLPLFT 598
           HAK GRY +PE++PFFP+DLP  + P H+Y QVLHPA + INVN  IW +Y ++ LPLF 
Sbjct: 61  HAKAGRYENPEENPFFPDDLPPSMVPTHDYKQVLHPAGSSINVNKTIWDIYLNKLLPLFA 120

Query: 599 AEGDDGNYGSTAECDLKCLQALSRRIHYGKFVAEVKFRDAPQDYGPAIHAQDKDTLMKLL 778
           AEGDDGNYG TA CDL CLQA+SRRIHYGKFVAEVKF+++P++YGPAIH QD+  LMK+L
Sbjct: 121 AEGDDGNYGLTAACDLACLQAISRRIHYGKFVAEVKFKESPEEYGPAIHDQDRAGLMKML 180

Query: 779 TFXXXXXXXXXXXXXXXXXFGQEVSLDDKGDTGK-YKVDPSLVSRLYGEWVMPLTKLVQV 955
           TF                 FGQEV+L D   + + YKVDPS+VSRLY EWVMPLTK VQV
Sbjct: 181 TFEAVEEMVKKRVEKKATVFGQEVNLSDNSKSKETYKVDPSVVSRLYEEWVMPLTKQVQV 240

Query: 956 EY 961
           EY
Sbjct: 241 EY 242


>emb|CAN82251.1| hypothetical protein VITISV_036494 [Vitis vinifera]
          Length = 248

 Score =  289 bits (739), Expect = 1e-75
 Identities = 146/242 (60%), Positives = 175/242 (72%), Gaps = 4/242 (1%)
 Frame = +2

Query: 248 LSLESVRESLISQEDTIVLSLIERAQFPCNSPAYDPLSSPA---LCGSLLEYIVKETEII 418
           + LESVR+SLI QEDTIV SLIERA+FP NS AY P  +        S L   V+E+E +
Sbjct: 1   MDLESVRDSLIRQEDTIVFSLIERAKFPINSWAYSPPQNGVDAFSASSFLHSFVRESEAL 60

Query: 419 HAKVGRYTSPEDHPFFPNDLPLPLTPPHNYPQVLHPAAAFINVNDIIWKMYFDQFLPLFT 598
           HAK GRY +PE++PFFP+DLP  + P H+Y QVLHPA + INVN  IW +Y ++ LPLF 
Sbjct: 61  HAKAGRYENPEENPFFPDDLPPSMVPTHDYKQVLHPAGSSINVNKTIWDIYLNKLLPLFA 120

Query: 599 AEGDDGNYGSTAECDLKCLQALSRRIHYGKFVAEVKFRDAPQDYGPAIHAQDKDTLMKLL 778
           AEGDDGNYG TA CDL CLQA+SRRIHYGKFVAEVKF+++P++YGPAIH QD+  LMK+L
Sbjct: 121 AEGDDGNYGLTAACDLACLQAISRRIHYGKFVAEVKFKESPEEYGPAIHDQDRAGLMKML 180

Query: 779 TFXXXXXXXXXXXXXXXXXFGQEVSLDDKGDTGK-YKVDPSLVSRLYGEWVMPLTKLVQV 955
           TF                 FGQEV+L D   + + YKVDPS+VSRLY EWVMPLTK VQV
Sbjct: 181 TFEAVEEMVKKRVEKKATVFGQEVNLSDXSKSKETYKVDPSVVSRLYEEWVMPLTKQVQV 240

Query: 956 EY 961
           EY
Sbjct: 241 EY 242


>ref|XP_004145501.1| PREDICTED: chorismate mutase, chloroplastic-like [Cucumis sativus]
           gi|449522327|ref|XP_004168178.1| PREDICTED: chorismate
           mutase, chloroplastic-like [Cucumis sativus]
          Length = 260

 Score =  280 bits (716), Expect = 6e-73
 Identities = 140/248 (56%), Positives = 177/248 (71%), Gaps = 2/248 (0%)
 Frame = +2

Query: 224 PYSTTDSGLSLESVRESLISQEDTIVLSLIERAQFPCNSPAY--DPLSSPALCGSLLEYI 397
           P S +D+ L+L+ +R+SLI QED+IV SLIERA+FP N   Y  +  S P   GSL+E+I
Sbjct: 8   PNSASDT-LTLDGIRDSLIRQEDSIVFSLIERARFPLNGKMYLHNHASIPGFSGSLVEFI 66

Query: 398 VKETEIIHAKVGRYTSPEDHPFFPNDLPLPLTPPHNYPQVLHPAAAFINVNDIIWKMYFD 577
           V+ETE + AK GRY +PE++PFFP +LP PL  PH YP+VLHP+ A IN+N  IW  YF 
Sbjct: 67  VRETEDVQAKAGRYENPEENPFFPENLPRPLVHPHKYPKVLHPSGASINMNKAIWDFYFK 126

Query: 578 QFLPLFTAEGDDGNYGSTAECDLKCLQALSRRIHYGKFVAEVKFRDAPQDYGPAIHAQDK 757
           +FLPL  ++GDDGNY +TA  DL CLQALSRRIH GK+VAEVKFRDAP +Y   I +Q++
Sbjct: 127 EFLPLLVSDGDDGNYAATAASDLACLQALSRRIHCGKYVAEVKFRDAPNEYEGPIRSQER 186

Query: 758 DTLMKLLTFXXXXXXXXXXXXXXXXXFGQEVSLDDKGDTGKYKVDPSLVSRLYGEWVMPL 937
           DTLM+LLTF                 FGQEV+L++    GK+K+DPSL S LY +WVMPL
Sbjct: 187 DTLMELLTFKAVEEQVKKRVEKKAMVFGQEVTLNNTSGGGKHKIDPSLASLLYDKWVMPL 246

Query: 938 TKLVQVEY 961
           TK V+VEY
Sbjct: 247 TKEVEVEY 254


>ref|XP_002515429.1| chorismate mutase cm2, putative [Ricinus communis]
           gi|223545373|gb|EEF46878.1| chorismate mutase cm2,
           putative [Ricinus communis]
          Length = 253

 Score =  279 bits (713), Expect = 1e-72
 Identities = 142/245 (57%), Positives = 171/245 (69%), Gaps = 4/245 (1%)
 Frame = +2

Query: 239 DSG--LSLESVRESLISQEDTIVLSLIERAQFPCNSPAYDPLSS--PALCGSLLEYIVKE 406
           DSG   +L+ VR+SL  QEDTIV  LIER++FP NSP Y       P   GSL+ +IVKE
Sbjct: 3   DSGTAFNLDLVRQSLERQEDTIVFCLIERSRFPSNSPLYSQNLDLVPGFSGSLVHFIVKE 62

Query: 407 TEIIHAKVGRYTSPEDHPFFPNDLPLPLTPPHNYPQVLHPAAAFINVNDIIWKMYFDQFL 586
           TE I +K  RY +PE++PFFP+DLP  + P H YP+ LHP AA ++VN  IW MYF++ L
Sbjct: 63  TEAIQSKARRYENPEENPFFPDDLPHSVVPSHKYPKFLHPPAASVDVNKQIWDMYFNKLL 122

Query: 587 PLFTAEGDDGNYGSTAECDLKCLQALSRRIHYGKFVAEVKFRDAPQDYGPAIHAQDKDTL 766
           PLF  +GDDGNY STA  DL CLQALSRRIHYGKFVAEVKFR+APQ+Y PAI +QD+D L
Sbjct: 123 PLFVTKGDDGNYASTAANDLNCLQALSRRIHYGKFVAEVKFREAPQEYEPAIRSQDRDAL 182

Query: 767 MKLLTFXXXXXXXXXXXXXXXXXFGQEVSLDDKGDTGKYKVDPSLVSRLYGEWVMPLTKL 946
           M +LTF                 FGQ+VS  +     KYKVDPS++S LY EWVMPLTKL
Sbjct: 183 MNMLTFKNVEETVKKRVAKKATVFGQDVSHGNNTSAEKYKVDPSILSHLYDEWVMPLTKL 242

Query: 947 VQVEY 961
           V+VEY
Sbjct: 243 VEVEY 247


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