BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004916
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17453.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002514718.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  130 bits (326), Expect = 2e-28
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           DVISWTSLIVAYAK G+MEAA+ELF+GLP KDMVAWTAM+TGYAQNA+PREAL++FE M+
Sbjct: 205 DVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQ 264

Query: 183 DVGVSTDEVTLVGGISACTLL 245
             GV TDEVTLVG ISAC  L
Sbjct: 265 AAGVKTDEVTLVGVISACAQL 285


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  130 bits (326), Expect = 2e-28
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           DVISWTSLIVAYAK G+MEAA+ELF+GLP KDMVAWTAM+TGYAQNA+PREAL++FE M+
Sbjct: 205 DVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQ 264

Query: 183 DVGVSTDEVTLVGGISACTLL 245
             GV TDEVTLVG ISAC  L
Sbjct: 265 AAGVKTDEVTLVGVISACAQL 285


>ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546322|gb|EEF47824.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 399

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/81 (72%), Positives = 71/81 (87%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           DVISWT +IVAYAKSGDM++A  LF+GLP KDMVAWTAM+TG++QNAKPREA++ FE M+
Sbjct: 206 DVISWTEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPREAIQFFERMQ 265

Query: 183 DVGVSTDEVTLVGGISACTLL 245
           D G+ TDEVTLVG ISAC+ L
Sbjct: 266 DAGIGTDEVTLVGVISACSQL 286


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           DV+SWT LIVAYAK GDME+A+ LF+ LP KDMVAWTAM+TGYAQN +P+EAL+ F+ M+
Sbjct: 208 DVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ 267

Query: 183 DVGVSTDEVTLVGGISACTLL 245
           DVG+ TDEVTL G ISAC  L
Sbjct: 268 DVGMETDEVTLAGVISACAQL 288



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 25/79 (31%), Positives = 50/79 (63%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           +V+  ++LI  Y+K G  + A ++F  + E+++ ++++MI GYA + +   AL+LF  M 
Sbjct: 311 NVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDML 370

Query: 183 DVGVSTDEVTLVGGISACT 239
              +  ++VT +G +SAC+
Sbjct: 371 KTEIRPNKVTFIGILSACS 389


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  120 bits (302), Expect = 1e-25
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           DV+SWT LIVAYAK GDME+A+ LF+ LP KDMVAWTAM+TGYAQN +P+EAL+ F+ M+
Sbjct: 208 DVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ 267

Query: 183 DVGVSTDEVTLVGGISACTLL 245
           DVG+ TDEVTL G ISAC  L
Sbjct: 268 DVGMETDEVTLAGVISACAQL 288



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 25/79 (31%), Positives = 50/79 (63%)
 Frame = +3

Query: 3   DVISWTSLIVAYAKSGDMEAAAELFNGLPEKDMVAWTAMITGYAQNAKPREALKLFESMR 182
           +V+  ++LI  Y+K G  + A ++F  + E+++ ++++MI GYA + +   AL+LF  M 
Sbjct: 311 NVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDML 370

Query: 183 DVGVSTDEVTLVGGISACT 239
              +  ++VT +G +SAC+
Sbjct: 371 KTEIRPNKVTFIGILSACS 389