BLASTX nr result

ID: Coptis23_contig00004910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004910
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26218.1| unknown [Picea sitchensis]                              62   6e-08

>gb|ABK26218.1| unknown [Picea sitchensis]
          Length = 176

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
 Frame = -2

Query: 584 YNQCAPSTCGDSILKFPFGKSPLCSSAYITTTCENNSVYLTDEENTYIKYKLLHNLTNEV 405
           Y  CAP TCG+S +++PFG    C   Y   +  N ++  T   +   ++ ++ ++T   
Sbjct: 40  YEDCAPETCGNSTIRYPFG---TCGPLYADCSEANQTILSTQSGS---RWGVVGDITKSS 93

Query: 404 YTNTSVRLVDTSLFGCGTIPAFTGLTPNSGYEAQKWVLLGALHYTSD-YRTGTFFNCTKE 228
           Y   ++++    ++             ++  ++  W+L G     SD Y  GT  NCT+ 
Sbjct: 94  YFTQTLQITPYDIY-------------SNSEDSYDWLLKGVFFNLSDAYMVGTIVNCTQP 140

Query: 227 PDKNTLGNMMRSPCLECGETSNLCYFY 147
           P    + N   S  L+C E++  C+FY
Sbjct: 141 PGDILVNN---SKKLDCTESNRYCFFY 164


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