BLASTX nr result

ID: Coptis23_contig00004902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004902
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide...   521   e-145
ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide...   520   e-145
ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide...   516   e-144
ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communi...   503   e-140
ref|XP_002321321.1| predicted protein [Populus trichocarpa] gi|2...   502   e-140

>ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like [Cucumis sativus] gi|449533312|ref|XP_004173620.1|
            PREDICTED: WD repeat domain phosphoinositide-interacting
            protein 3-like [Cucumis sativus]
          Length = 420

 Score =  521 bits (1342), Expect = e-145
 Identities = 265/359 (73%), Positives = 286/359 (79%)
 Frame = -1

Query: 1240 DQGFRIYNCDPFREIFRRVFDKGGGIGVVEMLFRCNILALVGGGTDPQYSPNKVMIWDDX 1061
            D+GFRIYNCDPFREIFRR FD+GGG+GVVEMLFRCNILALVGGG DPQY PNKVMIWDD 
Sbjct: 89   DRGFRIYNCDPFREIFRRDFDRGGGVGVVEMLFRCNILALVGGGPDPQYPPNKVMIWDD- 147

Query: 1060 XXXXXXXXXXXXXXXXXXXXXIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXEQKIFV 881
                                     HQ+RCIGELSF                  EQK+FV
Sbjct: 148  -------------------------HQSRCIGELSFRSAVRGVRLQRDRIIVILEQKVFV 182

Query: 880  YNFADLKLLHQIETFANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHD 701
            YNFADLKLLHQIET ANPKGLCAVSQ+STS VLVCPGLQKGQVRVEHYAS+RTKFI+AHD
Sbjct: 183  YNFADLKLLHQIETIANPKGLCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMAHD 242

Query: 700  SRVACFALSMDGKLLATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWL 521
            SR+ACFAL+ +G+LLATASTKGTLVRI+NT DG LLQEVRRGADRAEIYSLAFS +AQWL
Sbjct: 243  SRIACFALTTNGQLLATASTKGTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQWL 302

Query: 520  AVSSDKGTVHVFSLKVNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSV 341
            AVSSDKGTVHVFSLKVNSGS  N+ S      +   P S SS SFIKGVLPKYF SEWSV
Sbjct: 303  AVSSDKGTVHVFSLKVNSGSLGNDMSHQNDSSLSVAP-SGSSFSFIKGVLPKYFKSEWSV 361

Query: 340  AQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 164
            AQFRLHEGSQY+VAFGHQKNTVVILGMDGSFYRCQFD + GGEMTQLE++NFL P+E F
Sbjct: 362  AQFRLHEGSQYVVAFGHQKNTVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF 420


>ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 3
            [Vitis vinifera]
          Length = 439

 Score =  520 bits (1338), Expect = e-145
 Identities = 266/359 (74%), Positives = 287/359 (79%)
 Frame = -1

Query: 1240 DQGFRIYNCDPFREIFRRVFDKGGGIGVVEMLFRCNILALVGGGTDPQYSPNKVMIWDDX 1061
            D GFRIYNCDPFREIFRR FD+GGGIGVVEMLFRCNILALVGGG +PQY  NKVMIWDD 
Sbjct: 107  DNGFRIYNCDPFREIFRRDFDRGGGIGVVEMLFRCNILALVGGGPEPQYPLNKVMIWDD- 165

Query: 1060 XXXXXXXXXXXXXXXXXXXXXIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXEQKIFV 881
                                     HQ+RCIGELSF                  EQKIF+
Sbjct: 166  -------------------------HQSRCIGELSFRSEVRAVKLRRDRIIVVLEQKIFL 200

Query: 880  YNFADLKLLHQIETFANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHD 701
            YNFADLKLLHQIET ANP+GLCAVSQ++ S VLVCPGLQKGQVRVEHYAS+RTKF  AHD
Sbjct: 201  YNFADLKLLHQIETIANPRGLCAVSQLTASLVLVCPGLQKGQVRVEHYASRRTKFFAAHD 260

Query: 700  SRVACFALSMDGKLLATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWL 521
            SR+ACFAL+ DG+LLATASTKGTLVRI+NT DGT LQEVRRGADRAE+YS+AFS +AQWL
Sbjct: 261  SRLACFALTTDGQLLATASTKGTLVRIFNTSDGTRLQEVRRGADRAEVYSMAFSSTAQWL 320

Query: 520  AVSSDKGTVHVFSLKVNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSV 341
            AVSSDKGTVHVF LKVNSGS  N+KS  AS+   A  SS  SLSFIKGVLPKYFSSEWSV
Sbjct: 321  AVSSDKGTVHVFGLKVNSGSLGNDKSHGASDANLAVASSGLSLSFIKGVLPKYFSSEWSV 380

Query: 340  AQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 164
            AQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDP+TGGEMTQLE++NFL P+E F
Sbjct: 381  AQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPVTGGEMTQLEYHNFLKPEEAF 439


>ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like isoform 1 [Vitis vinifera]
          Length = 425

 Score =  516 bits (1328), Expect = e-144
 Identities = 268/364 (73%), Positives = 289/364 (79%), Gaps = 5/364 (1%)
 Frame = -1

Query: 1240 DQGFRIYNCDPFREIFRRVF--DKGG---GIGVVEMLFRCNILALVGGGTDPQYSPNKVM 1076
            D GFRIYNCDPFREIFRR F  D GG   GIGVVEMLFRCNILALVGGG DPQY PNKVM
Sbjct: 88   DHGFRIYNCDPFREIFRRDFCGDDGGSGTGIGVVEMLFRCNILALVGGGPDPQYPPNKVM 147

Query: 1075 IWDDXXXXXXXXXXXXXXXXXXXXXXIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXE 896
            IWDD                          HQ RCIGELSF                   
Sbjct: 148  IWDD--------------------------HQTRCIGELSFRSEVKSVRLRRDRIVAILL 181

Query: 895  QKIFVYNFADLKLLHQIETFANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKF 716
            QKIFVYNFADLKLLHQIET ANPKGLC VSQ+S S VLVCPGL KGQVRVEHY SKRTKF
Sbjct: 182  QKIFVYNFADLKLLHQIETIANPKGLCEVSQLSGSMVLVCPGLLKGQVRVEHYNSKRTKF 241

Query: 715  ILAHDSRVACFALSMDGKLLATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSP 536
            I+AHDSR+ACFAL+ DG+LLAT+S+KGTLVRI+NT+DGTLLQEVRRGADRAEIYS+AFS 
Sbjct: 242  IMAHDSRIACFALTQDGRLLATSSSKGTLVRIFNTLDGTLLQEVRRGADRAEIYSVAFSS 301

Query: 535  SAQWLAVSSDKGTVHVFSLKVNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFS 356
            SAQWLAVSSDKGTVHVFSLKV SGS  +++SR +SE   + PS+ SSLSF+KGVLP+YFS
Sbjct: 302  SAQWLAVSSDKGTVHVFSLKVESGSLGSDRSRSSSEPNLSVPSAVSSLSFMKGVLPRYFS 361

Query: 355  SEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYP 176
            SEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDP+ GGEMTQLE+YNFL P
Sbjct: 362  SEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLKP 421

Query: 175  KETF 164
            +ETF
Sbjct: 422  EETF 425


>ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communis]
            gi|223528474|gb|EEF30503.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 447

 Score =  503 bits (1295), Expect = e-140
 Identities = 259/361 (71%), Positives = 282/361 (78%), Gaps = 2/361 (0%)
 Frame = -1

Query: 1240 DQGFRIYNCDPFREIFRRVFDKGGG--IGVVEMLFRCNILALVGGGTDPQYSPNKVMIWD 1067
            D GFRIYNCDPFREIFRR FD+GGG  IGVVEMLFRCNILALVGGG+DPQY PNKVMIWD
Sbjct: 113  DHGFRIYNCDPFREIFRRDFDRGGGGGIGVVEMLFRCNILALVGGGSDPQYPPNKVMIWD 172

Query: 1066 DXXXXXXXXXXXXXXXXXXXXXXIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXEQKI 887
            D                          HQ+RCIGELSF                  EQKI
Sbjct: 173  D--------------------------HQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKI 206

Query: 886  FVYNFADLKLLHQIETFANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILA 707
            FVYNFADLKLLHQIET ANPKGLCAVS  + S VLVCPGLQKGQVRVEHYASKRTKFI+A
Sbjct: 207  FVYNFADLKLLHQIETIANPKGLCAVSHGAGSLVLVCPGLQKGQVRVEHYASKRTKFIMA 266

Query: 706  HDSRVACFALSMDGKLLATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQ 527
            HDSR+ACFAL+ DG+LLATASTKGTLVR++NT DG+LLQEVRRGADRAEIYS+AFS +AQ
Sbjct: 267  HDSRIACFALTQDGQLLATASTKGTLVRVFNTADGSLLQEVRRGADRAEIYSVAFSSTAQ 326

Query: 526  WLAVSSDKGTVHVFSLKVNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEW 347
            WLAVSSDKGTVHVFSLK   GS   ++SR+ ++      S  SSLSF KGVLPKYFSSEW
Sbjct: 327  WLAVSSDKGTVHVFSLKTTPGSLGTDRSRNTTDPNVGVSSPTSSLSFFKGVLPKYFSSEW 386

Query: 346  SVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKET 167
            SVAQFRL EGS YIVAFGHQKNTVVILG+DGSFYRCQFDP+ GGEM+QLEF+NFL P+  
Sbjct: 387  SVAQFRLVEGSHYIVAFGHQKNTVVILGLDGSFYRCQFDPVNGGEMSQLEFHNFLKPEAA 446

Query: 166  F 164
            F
Sbjct: 447  F 447


>ref|XP_002321321.1| predicted protein [Populus trichocarpa] gi|222862094|gb|EEE99636.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  502 bits (1293), Expect = e-140
 Identities = 260/360 (72%), Positives = 279/360 (77%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1240 DQGFRIYNCDPFREIFRRVFD----KGGGIGVVEMLFRCNILALVGGGTDPQYSPNKVMI 1073
            D GFRIYNCDPFREIFRR FD     GGGIG VEMLFRCN+LALVGGG DPQY PNKVMI
Sbjct: 18   DHGFRIYNCDPFREIFRRDFDGSGNSGGGIGAVEMLFRCNVLALVGGGPDPQYPPNKVMI 77

Query: 1072 WDDXXXXXXXXXXXXXXXXXXXXXXIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXEQ 893
            WDD                          HQ+RCIGELSF                  EQ
Sbjct: 78   WDD--------------------------HQSRCIGELSFRSEVRSVKLRRDRIIVVLEQ 111

Query: 892  KIFVYNFADLKLLHQIETFANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFI 713
            KIFVYNFADLKLLHQIET ANPKGLCAVS  + S VLVCPGLQKGQVRVEHYASKRTKFI
Sbjct: 112  KIFVYNFADLKLLHQIETIANPKGLCAVSHGAGSLVLVCPGLQKGQVRVEHYASKRTKFI 171

Query: 712  LAHDSRVACFALSMDGKLLATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPS 533
            + HDSR ACFAL+ DG+LLATASTKGTLVRI+NT DGTLLQEVRRGADRAE+YSLAFS +
Sbjct: 172  MVHDSRTACFALTQDGQLLATASTKGTLVRIFNTADGTLLQEVRRGADRAEVYSLAFSST 231

Query: 532  AQWLAVSSDKGTVHVFSLKVNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSS 353
            AQWLAVSSDKGTVHVFSLK+N GSP  ++S+  +E   A  S  SSLSF KGVLPKYFSS
Sbjct: 232  AQWLAVSSDKGTVHVFSLKINPGSPVIDRSQSTNEPNLALTSPASSLSFFKGVLPKYFSS 291

Query: 352  EWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPK 173
            EWSVAQF L EGSQYIVAFGHQKNTVVILG+DGSFYRCQFDP+ GGEMTQLE++NFL P+
Sbjct: 292  EWSVAQFHLVEGSQYIVAFGHQKNTVVILGLDGSFYRCQFDPVNGGEMTQLEYHNFLKPE 351


Top