BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004896
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37645.3| unnamed protein product [Vitis vinifera]              179   1e-42
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   174   4e-41
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   172   1e-40
gb|ADG57979.1| transcription factor [Lycoris longituba]               171   3e-40
ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-li...   170   6e-40

>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  179 bits (453), Expect = 1e-42
 Identities = 90/122 (73%), Positives = 106/122 (86%), Gaps = 2/122 (1%)
 Frame = -2

Query: 887 GKTKASNAKKADNKLAIKRKAGGSERGGKKPAGK--AVKDPNKPKRPASAFFVFMEDFRK 714
           GK+KA+  K+AD+KL++K+K  G+   GKK A K  AVKDPNKPKRPASAFFVFME+FRK
Sbjct: 4   GKSKAAEVKRADSKLSVKKK--GAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRK 61

Query: 713 SFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYNKNLQAYNKKLAEGN 534
            +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEYNK++QAYNK++AEG 
Sbjct: 62  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGP 121

Query: 533 DA 528
            A
Sbjct: 122 TA 123


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  174 bits (440), Expect = 4e-41
 Identities = 87/122 (71%), Positives = 101/122 (82%), Gaps = 2/122 (1%)
 Frame = -2

Query: 887 GKTKASNAKKADNKLAIKRKAGGSERGGKKPAGK--AVKDPNKPKRPASAFFVFMEDFRK 714
           GK+KA+  K+AD+   +  K  G+   GKK A K  AVKDPNKPKRPASAFFVFME+FRK
Sbjct: 4   GKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRK 63

Query: 713 SFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYNKNLQAYNKKLAEGN 534
            +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEYNK++QAYNK++AEG 
Sbjct: 64  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMAEGP 123

Query: 533 DA 528
            A
Sbjct: 124 TA 125


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  172 bits (436), Expect = 1e-40
 Identities = 85/117 (72%), Positives = 99/117 (84%)
 Frame = -2

Query: 887 GKTKASNAKKADNKLAIKRKAGGSERGGKKPAGKAVKDPNKPKRPASAFFVFMEDFRKSF 708
           G++K S+ KKAD KL++K+ A  ++ G K    K VKDPNKPKRPASAFFVFME+FRK +
Sbjct: 4   GRSK-SDTKKADAKLSVKKGAAATKAGKKTKKEKPVKDPNKPKRPASAFFVFMEEFRKQY 62

Query: 707 KEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYNKNLQAYNKKLAEG 537
           KEKHP+NKSVSVVGKAGGDKWKSMSEAEKAP+ AKAEKRK EY KN++AYNKK AEG
Sbjct: 63  KEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAEKRKVEYEKNMKAYNKKQAEG 119


>gb|ADG57979.1| transcription factor [Lycoris longituba]
          Length = 179

 Score =  171 bits (432), Expect = 3e-40
 Identities = 89/135 (65%), Positives = 102/135 (75%), Gaps = 3/135 (2%)
 Frame = -2

Query: 932 LSTHQTLTLQVFYTMGKTKASNAKKADNKLAIKRKAGGSERGGKKPAGKAVK---DPNKP 762
           LS  + LTL      GK+KA  +KKAD +L++KRKA  +E+  KKPA K  K   DPNKP
Sbjct: 7   LSLFEALTLDFAMKGGKSKADTSKKADARLSVKRKA--AEKPAKKPAVKKAKEGKDPNKP 64

Query: 761 KRPASAFFVFMEDFRKSFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTE 582
           KRP SAFFVFME+FRK FKEK+PNNK VSVVGKA GDKWKSMS  EKAP+ AKA KRK E
Sbjct: 65  KRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKAAKRKAE 124

Query: 581 YNKNLQAYNKKLAEG 537
           YNK + AYNKKLA+G
Sbjct: 125 YNKTMVAYNKKLADG 139


>ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
           vinifera]
          Length = 125

 Score =  170 bits (430), Expect = 6e-40
 Identities = 84/121 (69%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
 Frame = -2

Query: 887 GKTKASNAKKADNKLAIKRKAGGSERGGKKPAGK--AVKDPNKPKRPASAFFVFMEDFRK 714
           GK+KA+  K+AD+   +  K  G+   GKK A K  AVKDPNKPKRPASAFFVFME+FRK
Sbjct: 4   GKSKAAEVKRADSNARLSVKKKGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRK 63

Query: 713 SFKEKHPNNKSVSVVGKAGGDKWKSMSEAEKAPFHAKAEKRKTEYNKNLQAYNKKLAEGN 534
            +KEKHP NKSVSVVGKAGGDKWKS+SEAEKAP+ AKAEKRKTEYNK++QAYNK++ E +
Sbjct: 64  QYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKRMEEDD 123

Query: 533 D 531
           +
Sbjct: 124 E 124