BLASTX nr result

ID: Coptis23_contig00004890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004890
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310794.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
gb|ABR16990.1| unknown [Picea sitchensis]                             230   3e-58
ref|XP_003537563.1| PREDICTED: minor allergen Alt a 7-like [Glyc...   227   2e-57
ref|XP_002327699.1| predicted protein [Populus trichocarpa] gi|2...   225   9e-57
ref|XP_004143499.1| PREDICTED: flavoprotein-like protein YCP4-li...   224   2e-56

>ref|XP_002310794.1| predicted protein [Populus trichocarpa] gi|222853697|gb|EEE91244.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  231 bits (588), Expect = 2e-58
 Identities = 123/187 (65%), Positives = 142/187 (75%)
 Frame = -2

Query: 561 MGKGGGCVPSKKRAPIVASPEERDNEQQQTSNNNDIVTTQIEENNNSNLQALPSTTTAAA 382
           MGKGGGCVPSKK+ P V+      ++   T+   + +    EE N+    +L  T +   
Sbjct: 1   MGKGGGCVPSKKKQPPVS------DDPVSTTREAEPIPVNDEETNDVASTSLEPTIS--- 51

Query: 381 SKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYLYRVPETLSIQVLEQMKVPQKDDG 202
           SKLK+FIVFYSMYGHVEGLAKRMKKGVD +EGV+ +LYRV ETLS  VL +MKVP+KD G
Sbjct: 52  SKLKVFIVFYSMYGHVEGLAKRMKKGVDGVEGVEAFLYRVAETLSDDVLIKMKVPEKDVG 111

Query: 201 IEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDSTGQLWKEQKLAGKPGGFFVSTGT 22
           I  I+ A ELV ADG+LFGFP RYG MAAQMK+FFDSTGQLWKEQKLAGKP GFFVSTGT
Sbjct: 112 IPEIT-AAELVNADGVLFGFPTRYGCMAAQMKAFFDSTGQLWKEQKLAGKPAGFFVSTGT 170

Query: 21  QGGGQET 1
           QGGGQET
Sbjct: 171 QGGGQET 177


>gb|ABR16990.1| unknown [Picea sitchensis]
          Length = 272

 Score =  230 bits (586), Expect = 3e-58
 Identities = 123/196 (62%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
 Frame = -2

Query: 561 MGKGGGCVPS--KKRAPIVASPEERD-NEQQQTSNNNDIVTTQIEENNNSN------LQA 409
           MGKGGGCVPS  +KR P V S  + D N      NNNDI    +EE             A
Sbjct: 1   MGKGGGCVPSSSRKRLPGVGSSHKEDPNADLPQENNNDISEKPVEEALGHEDPPPILEDA 60

Query: 408 LPSTTTAAASKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYLYRVPETLSIQVLEQ 229
             S   ++  KL+IF+VFYSMYGHVE LAK+MK+G+D IEGV+G LYRVPE LS QVLEQ
Sbjct: 61  ASSLPLSSPRKLRIFVVFYSMYGHVEALAKKMKEGIDAIEGVEGTLYRVPEILSAQVLEQ 120

Query: 228 MKVPQKDDGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDSTGQLWKEQKLAGKP 49
           M+ P KD+ I VI+ AEEL  ADG+LFGFP RYG+MAAQMK+FFDSTG+LW+EQ LAGKP
Sbjct: 121 MRAPPKDESIPVIT-AEELTAADGLLFGFPTRYGAMAAQMKAFFDSTGKLWREQSLAGKP 179

Query: 48  GGFFVSTGTQGGGQET 1
            GFFVSTGTQGGGQET
Sbjct: 180 AGFFVSTGTQGGGQET 195


>ref|XP_003537563.1| PREDICTED: minor allergen Alt a 7-like [Glycine max]
          Length = 263

 Score =  227 bits (579), Expect = 2e-57
 Identities = 117/187 (62%), Positives = 135/187 (72%)
 Frame = -2

Query: 561 MGKGGGCVPSKKRAPIVASPEERDNEQQQTSNNNDIVTTQIEENNNSNLQALPSTTTAAA 382
           MGKGGGCVPSKK+ P VA           +  +N            +   A  S++    
Sbjct: 1   MGKGGGCVPSKKKPPPVADDAPAPTPPPISPPDNAHARKPDAPAQVAREAASSSSSLPGG 60

Query: 381 SKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYLYRVPETLSIQVLEQMKVPQKDDG 202
           ++LK+F+VFYSMYGHVEGLAKR+KKGVD +EGV+G LYRVPETL I+VL QM+ P KDD 
Sbjct: 61  ARLKVFVVFYSMYGHVEGLAKRLKKGVDGVEGVEGVLYRVPETLPIEVLNQMRAPPKDDA 120

Query: 201 IEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDSTGQLWKEQKLAGKPGGFFVSTGT 22
           I  I+ A EL  ADG+LFGFP RYGSMAAQMK+FFDSTG LWKEQKLAGKP GFFVSTGT
Sbjct: 121 IPEIT-AAELTAADGVLFGFPTRYGSMAAQMKAFFDSTGHLWKEQKLAGKPAGFFVSTGT 179

Query: 21  QGGGQET 1
           QGGGQET
Sbjct: 180 QGGGQET 186


>ref|XP_002327699.1| predicted protein [Populus trichocarpa] gi|222836784|gb|EEE75177.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  225 bits (573), Expect = 9e-57
 Identities = 123/191 (64%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
 Frame = -2

Query: 561 MGKGGGCVPSKKRAPIVASPEERDNEQQQTSNNND----IVTTQIEENNNSNLQALPSTT 394
           MGKGGGCVPSKK+ P V+       E      ++D    + TT +E              
Sbjct: 1   MGKGGGCVPSKKKQPPVSDDPVSSREAAPIPVHDDETIDVATTSLEPR------------ 48

Query: 393 TAAASKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYLYRVPETLSIQVLEQMKVPQ 214
               SKLKIFIVFYSMYGHVEGLAKRMKKGVD +EGV+ +LYRV ETLS  VL +MK P 
Sbjct: 49  --IPSKLKIFIVFYSMYGHVEGLAKRMKKGVDGVEGVEAFLYRVAETLSDDVLMKMKAPG 106

Query: 213 KDDGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDSTGQLWKEQKLAGKPGGFFV 34
           KD GI  I+ A ELV ADG+LFGFP RYG MAAQMKSFFDSTGQLWKEQKLAGKP GFFV
Sbjct: 107 KDVGIPEIT-AAELVNADGVLFGFPTRYGCMAAQMKSFFDSTGQLWKEQKLAGKPAGFFV 165

Query: 33  STGTQGGGQET 1
           STGTQGGGQET
Sbjct: 166 STGTQGGGQET 176


>ref|XP_004143499.1| PREDICTED: flavoprotein-like protein YCP4-like [Cucumis sativus]
           gi|449517812|ref|XP_004165938.1| PREDICTED:
           flavoprotein-like protein YCP4-like [Cucumis sativus]
          Length = 270

 Score =  224 bits (570), Expect = 2e-56
 Identities = 120/194 (61%), Positives = 140/194 (72%), Gaps = 7/194 (3%)
 Frame = -2

Query: 561 MGKGGGCVPSKKRAPIVASPEERD-NEQQQTSNNNDIVTTQIEENNNSNLQALPSTTTAA 385
           MGKGGGCVPSKK+ P   +  + D  +  +  +        IEE++     +  +T+ A+
Sbjct: 1   MGKGGGCVPSKKKVPSSIADADADATDDVRPRDTGTAPPISIEEDHPQIASSGNATSEAS 60

Query: 384 AS------KLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYLYRVPETLSIQVLEQMK 223
            S      KLKIFIVFYSMYGHVE LAKRMKKGVD ++G +G LYRVPETL ++VL+QMK
Sbjct: 61  LSVSHPVEKLKIFIVFYSMYGHVESLAKRMKKGVDGVDGFEGILYRVPETLPVEVLDQMK 120

Query: 222 VPQKDDGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDSTGQLWKEQKLAGKPGG 43
            P KD  I  IS A ELV AD ILFGFP R+G MAAQMK+FFDSTGQLWKEQKLAGKP G
Sbjct: 121 APPKDPSIPEIS-AAELVAADAILFGFPTRFGCMAAQMKAFFDSTGQLWKEQKLAGKPAG 179

Query: 42  FFVSTGTQGGGQET 1
           FFVSTGTQGGGQET
Sbjct: 180 FFVSTGTQGGGQET 193


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