BLASTX nr result

ID: Coptis23_contig00004889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004889
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/re...   345   7e-93
ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ri...   338   2e-90
dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]         337   3e-90
ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/re...   330   4e-88
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   329   7e-88

>ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 258

 Score =  345 bits (886), Expect = 7e-93
 Identities = 171/253 (67%), Positives = 205/253 (81%), Gaps = 1/253 (0%)
 Frame = -1

Query: 945 PLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINTPTL-STPRA 769
           PL+DR+AIVTGASRGIGR  ALHLASLGAK+V+NYT+N + A+ +AAEIN+ +  S+PRA
Sbjct: 6   PLQDRIAIVTGASRGIGRATALHLASLGAKIVINYTSNKAQAELVAAEINSSSSPSSPRA 65

Query: 768 ISIKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVIDSKYPTIANTEISDFDTVFNVN 589
           I  +A++SDPTQVK LFDTAEQ F + PHILVNSAGV+D+KYPTIANT + DFD +F++N
Sbjct: 66  IICQADVSDPTQVKSLFDTAEQIFNSPPHILVNSAGVLDAKYPTIANTSLEDFDKIFSIN 125

Query: 588 TKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETMVKILAKELK 409
           ++GAFLCC+EAANR+ R                L+ GFGAYAASKAAVETM KI+AKELK
Sbjct: 126 SRGAFLCCREAANRIKRGGAGRIILMSTSLVGSLKPGFGAYAASKAAVETMAKIMAKELK 185

Query: 408 GMKITANCVAPGPIATDMFFEGKSEEQVKRAIDECPLSRLGLTEDIAPIVGFLAGDSSEW 229
           G  IT NCVAPGPIATDMFF GKSEE VK+AI++ PLSRLG T+D+A +VGFLA D  EW
Sbjct: 186 GTGITVNCVAPGPIATDMFFSGKSEEDVKKAIEDSPLSRLGETKDVASVVGFLASDGGEW 245

Query: 228 VNGQVIRANGGYV 190
           VNGQV+R NGGYV
Sbjct: 246 VNGQVVRVNGGYV 258


>ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535255|gb|EEF36932.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  338 bits (866), Expect = 2e-90
 Identities = 170/262 (64%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
 Frame = -1

Query: 972 ANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINT 793
           AN     + PL+DRVAIVTG+SRGIG+ IALHLASLGAKLV+NY++N   AD +A ++N+
Sbjct: 7   ANPQNPTSLPLQDRVAIVTGSSRGIGKAIALHLASLGAKLVINYSSNKEQADLVARDVNS 66

Query: 792 PT-LSTPRAISIKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVIDSKYPTIANTEIS 616
            +   +PRAI+++AN+SDPT VK LFD AE+ F  Q H+ VNSAG +DSKYP+IA+T + 
Sbjct: 67  SSEKDSPRAIAVQANVSDPTHVKFLFDEAERVFGCQVHVFVNSAGTLDSKYPSIADTSLE 126

Query: 615 DFDTVFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 436
            FD  F++NT+GAFLCCKEAANRL R                LR GFGAYAASKAAVE M
Sbjct: 127 GFDLTFSINTRGAFLCCKEAANRLKRGGGGRIVVLSSSQVGALRPGFGAYAASKAAVEAM 186

Query: 435 VKILAKELKGMKITANCVAPGPIATDMFFEGKSEEQVKRAIDECPLSRLGLTEDIAPIVG 256
           VKILAKELKG  ITANCVAPGPIATDM+F GK+EEQ++R I ECPL RLG  +D+APIVG
Sbjct: 187 VKILAKELKGTGITANCVAPGPIATDMYFSGKTEEQIQRNIAECPLGRLGEPKDVAPIVG 246

Query: 255 FLAGDSSEWVNGQVIRANGGYV 190
           FLA D+SEWVNGQV+RANGGYV
Sbjct: 247 FLATDASEWVNGQVVRANGGYV 268


>dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]
          Length = 261

 Score =  337 bits (863), Expect = 3e-90
 Identities = 168/262 (64%), Positives = 201/262 (76%)
 Frame = -1

Query: 975 MANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEIN 796
           MA       + L +RVAIVTG+SRGIG+ IALHLASLGAKLV+NYT+NS+ AD + ++IN
Sbjct: 1   MAEVNVAQGQNLGNRVAIVTGSSRGIGKAIALHLASLGAKLVINYTSNSTQADDVVSQIN 60

Query: 795 TPTLSTPRAISIKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVIDSKYPTIANTEIS 616
           + T  +PRAI++KAN+SDP QVK LFD AE  F++  +ILVN AGV+D KYP+I NT + 
Sbjct: 61  S-TSDSPRAIAVKANVSDPDQVKSLFDAAESAFQSPVNILVNCAGVLDGKYPSILNTPLE 119

Query: 615 DFDTVFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 436
           DFD  F VN +GAF+CCKE ANR+ R                LR GFGAYAASKAAVE M
Sbjct: 120 DFDRTFGVNVRGAFICCKEGANRIQRGGGGRIICLSSSMAVALRPGFGAYAASKAAVEAM 179

Query: 435 VKILAKELKGMKITANCVAPGPIATDMFFEGKSEEQVKRAIDECPLSRLGLTEDIAPIVG 256
           VKILAKELKG  IT NC APGPIATDMF+EGK+EE +K+AIDECP  RLGL ED+AP+VG
Sbjct: 180 VKILAKELKGTGITVNCAAPGPIATDMFYEGKTEEMIKKAIDECPHGRLGLPEDVAPVVG 239

Query: 255 FLAGDSSEWVNGQVIRANGGYV 190
           FLAGD+SEWVNGQ+IR NGGY+
Sbjct: 240 FLAGDTSEWVNGQIIRVNGGYI 261


>ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Glycine
           max]
          Length = 265

 Score =  330 bits (845), Expect = 4e-88
 Identities = 164/262 (62%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
 Frame = -1

Query: 972 ANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINT 793
           ++ + + ++PL+DRVAIVTG+SRGIGREIALHLASLGA+LV+NYT+NS+ AD +AA+IN 
Sbjct: 4   SSESQSQSKPLQDRVAIVTGSSRGIGREIALHLASLGARLVVNYTSNSAQADSVAAQINA 63

Query: 792 PTLST-PRAISIKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVIDSKYPTIANTEIS 616
            + +T PRA+ ++A++SDP QVK LFD+AE+ F +  HILVNSAGVID  YP++A+T + 
Sbjct: 64  GSATTTPRAVVVQADVSDPAQVKSLFDSAERAFDSPIHILVNSAGVIDGTYPSVADTTVE 123

Query: 615 DFDTVFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 436
            FD  F VN +GAF C +EAANRL R                LR G+GAYAASKAAVE M
Sbjct: 124 SFDRTFAVNARGAFACAREAANRLKRGGGGRIILLTTSQVVALRPGYGAYAASKAAVEAM 183

Query: 435 VKILAKELKGMKITANCVAPGPIATDMFFEGKSEEQVKRAIDECPLSRLGLTEDIAPIVG 256
           VKILAKELKG +ITANCVAPGPIAT+MFFEGK+EE V R + E PL RLG T+D+AP+VG
Sbjct: 184 VKILAKELKGTQITANCVAPGPIATEMFFEGKTEEVVNRIVQESPLGRLGETKDVAPVVG 243

Query: 255 FLAGDSSEWVNGQVIRANGGYV 190
           FLA D+SEWVNGQ++R NGGY+
Sbjct: 244 FLATDASEWVNGQIVRVNGGYI 265


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  329 bits (843), Expect = 7e-88
 Identities = 167/263 (63%), Positives = 205/263 (77%), Gaps = 1/263 (0%)
 Frame = -1

Query: 975 MANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEIN 796
           MA  +P  + PL+DRVAIVTG+SRGIG+ IA+HLASLGAKLV+NYT+N   AD +A +IN
Sbjct: 1   MAAQSPLLSLPLQDRVAIVTGSSRGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDIN 60

Query: 795 TPTL-STPRAISIKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVIDSKYPTIANTEI 619
           +  + +TPRAI  +AN+SDP QVK LFD AE+ F +Q HILVN AGV+D KYP+I NT +
Sbjct: 61  SSCVDNTPRAIVAQANVSDPAQVKFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSL 120

Query: 618 SDFDTVFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVET 439
            DFD +F+VNT+GAFLCCKEAA+RL                 GL  GFGAYAASKAAVET
Sbjct: 121 EDFDHIFSVNTRGAFLCCKEAASRLKHGGGGRIIVLSSSMVGGLMPGFGAYAASKAAVET 180

Query: 438 MVKILAKELKGMKITANCVAPGPIATDMFFEGKSEEQVKRAIDECPLSRLGLTEDIAPIV 259
           +++ILAKELKG  ITANCVAPGP+AT+M+F GK+EEQ+K  I+  PL RLG T+DIA +V
Sbjct: 181 IIRILAKELKGTGITANCVAPGPVATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVV 240

Query: 258 GFLAGDSSEWVNGQVIRANGGYV 190
           GF+A D+SEW+NGQVIRANGGYV
Sbjct: 241 GFMATDASEWINGQVIRANGGYV 263


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