BLASTX nr result

ID: Coptis23_contig00004885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004885
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRU...    74   2e-11
emb|CBI30038.3| unnamed protein product [Vitis vinifera]               74   2e-11
emb|CAN63788.1| hypothetical protein VITISV_000288 [Vitis vinifera]    74   2e-11
ref|XP_004161500.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    72   5e-11
ref|XP_004136738.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    72   5e-11

>ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY
           2 [Vitis vinifera]
          Length = 721

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -2

Query: 263 FTRRSRNPMTPKTYTLAELQSATNSFSEDHLLGEGSLGSVFKAGFPDGQV 114
           F+++SR P   K YT+AELQ ATNSFSE++LLGEGSLGSV+K  FPDGQV
Sbjct: 372 FSKKSRIPANAKLYTVAELQLATNSFSEENLLGEGSLGSVYKGEFPDGQV 421


>emb|CBI30038.3| unnamed protein product [Vitis vinifera]
          Length = 737

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -2

Query: 263 FTRRSRNPMTPKTYTLAELQSATNSFSEDHLLGEGSLGSVFKAGFPDGQV 114
           F+++SR P   K YT+AELQ ATNSFSE++LLGEGSLGSV+K  FPDGQV
Sbjct: 392 FSKKSRIPANAKLYTVAELQLATNSFSEENLLGEGSLGSVYKGEFPDGQV 441


>emb|CAN63788.1| hypothetical protein VITISV_000288 [Vitis vinifera]
          Length = 658

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -2

Query: 263 FTRRSRNPMTPKTYTLAELQSATNSFSEDHLLGEGSLGSVFKAGFPDGQV 114
           F+++SR P   K YT+AELQ ATNSFSE++LLGEGSLGSV+K  FPDGQV
Sbjct: 313 FSKKSRIPANAKLYTVAELQLATNSFSEENLLGEGSLGSVYKGEFPDGQV 362


>ref|XP_004161500.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Cucumis
           sativus]
          Length = 692

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -2

Query: 263 FTRRSRNPMTPKTYTLAELQSATNSFSEDHLLGEGSLGSVFKAGFPDGQV 114
           F+ RS  P   KTYT+AEL+SATN +SE++LLGEGSLGSV+KA FPDGQ+
Sbjct: 363 FSERSSFPGKTKTYTVAELESATNMYSEENLLGEGSLGSVYKAEFPDGQI 412


>ref|XP_004136738.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Cucumis
           sativus]
          Length = 690

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -2

Query: 263 FTRRSRNPMTPKTYTLAELQSATNSFSEDHLLGEGSLGSVFKAGFPDGQV 114
           F+ RS  P   KTYT+AEL+SATN +SE++LLGEGSLGSV+KA FPDGQ+
Sbjct: 363 FSERSSFPGKTKTYTVAELESATNMYSEENLLGEGSLGSVYKAEFPDGQI 412


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