BLASTX nr result

ID: Coptis23_contig00004884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004884
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511878.1| conserved hypothetical protein [Ricinus comm...   436   e-120
ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycin...   429   e-118
ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago ...   422   e-116
ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arab...   418   e-115

>ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis]
           gi|223549058|gb|EEF50547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score =  436 bits (1120), Expect = e-120
 Identities = 209/263 (79%), Positives = 235/263 (89%)
 Frame = -2

Query: 975 MGHLYALDFDGVLCDSCGESSLSAVKAAKIRWPSLFNGVDTSLENWIVDQMHVVRPVVET 796
           MG LYALDFDGVLCDSCGESSLSAVKAAK+RWP LF+GVD++LE WIVDQM +VRPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQMFIVRPVVET 60

Query: 795 GYENXXXXXXXLEIRMPSVRESSVAAGLTIEDTLENWPKLKAVIMNEWSEDRDALIGLFG 616
           GYEN       LE+RMPS+R+SSVA GLT+E  LENW KLK VIM EW EDRD+LI LFG
Sbjct: 61  GYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDSLIHLFG 120

Query: 615 KVRDEWLEKDFSSWIGANRFYPGVPDTLKFASSKLYIVTTKQSRFADALLQELGGVTIPS 436
           K+RDEW++KD ++WI ANRFYPGVPD LKFASS++YIVTTKQSRFADALL+EL G+TIP 
Sbjct: 121 KIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALLRELAGLTIPP 180

Query: 435 DRIYGLGTGPKVEVLKQLQSKPENQGLTLHFVEDRLATLRNVIKEPDLDAWNLYLVNWGY 256
           ++IYGLGTGPKV+VLKQLQ KPE QGLTLHFVEDRLATL+NVIKEP+LD WNLYL +WGY
Sbjct: 181 EKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240

Query: 255 NTQKEREEAASIPRIRLLELSDF 187
           NTQKEREEAASIPRIRLL+LSDF
Sbjct: 241 NTQKEREEAASIPRIRLLQLSDF 263


>ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max]
           gi|255647823|gb|ACU24371.1| unknown [Glycine max]
          Length = 268

 Score =  429 bits (1103), Expect = e-118
 Identities = 206/263 (78%), Positives = 231/263 (87%)
 Frame = -2

Query: 975 MGHLYALDFDGVLCDSCGESSLSAVKAAKIRWPSLFNGVDTSLENWIVDQMHVVRPVVET 796
           MG LYALDFDGV+CDSCGESSLSA+KAAK+RWP LF+GVD++ ENWI+DQMH VRPVVET
Sbjct: 1   MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHTVRPVVET 60

Query: 795 GYENXXXXXXXLEIRMPSVRESSVAAGLTIEDTLENWPKLKAVIMNEWSEDRDALIGLFG 616
           GYEN       LE R P++R+SSVA GLT+E  LENW KLK +IM EW E RD LI LFG
Sbjct: 61  GYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDDLIDLFG 120

Query: 615 KVRDEWLEKDFSSWIGANRFYPGVPDTLKFASSKLYIVTTKQSRFADALLQELGGVTIPS 436
           KVRDEWLE+DF++WIGANR YPGV D LKFASS++YIVTTKQSRFADALL+EL GVTIP 
Sbjct: 121 KVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALLRELAGVTIPP 180

Query: 435 DRIYGLGTGPKVEVLKQLQSKPENQGLTLHFVEDRLATLRNVIKEPDLDAWNLYLVNWGY 256
           +RIYGLGTGPKVEVLKQLQ KPE+QGLTLHFVEDRLATL+NVIKEP+LD WNLYL NWGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240

Query: 255 NTQKEREEAASIPRIRLLELSDF 187
           NTQKEREEAA+IPRI +LELS+F
Sbjct: 241 NTQKEREEAAAIPRIHVLELSNF 263


>ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula]
           gi|217073782|gb|ACJ85251.1| unknown [Medicago
           truncatula] gi|355498995|gb|AES80198.1| hypothetical
           protein MTR_7g077870 [Medicago truncatula]
           gi|388518891|gb|AFK47507.1| unknown [Medicago
           truncatula]
          Length = 268

 Score =  422 bits (1086), Expect = e-116
 Identities = 201/263 (76%), Positives = 233/263 (88%)
 Frame = -2

Query: 975 MGHLYALDFDGVLCDSCGESSLSAVKAAKIRWPSLFNGVDTSLENWIVDQMHVVRPVVET 796
           MG LYALDFDGV+CDSCGESSLSA+KAAK+RWP LF+GVD+++E+WIVDQMH VRPVVET
Sbjct: 1   MGELYALDFDGVICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHTVRPVVET 60

Query: 795 GYENXXXXXXXLEIRMPSVRESSVAAGLTIEDTLENWPKLKAVIMNEWSEDRDALIGLFG 616
           GYEN       LE R PS+R+SSVA GL +E  LE+W  LK +IM EW E+R+ALI LFG
Sbjct: 61  GYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGENREALIDLFG 120

Query: 615 KVRDEWLEKDFSSWIGANRFYPGVPDTLKFASSKLYIVTTKQSRFADALLQELGGVTIPS 436
           KVRDEWLE+DF++WIGANR YPGV D LKFASSK++IVTTKQSRFADALL+EL GVTIPS
Sbjct: 121 KVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELAGVTIPS 180

Query: 435 DRIYGLGTGPKVEVLKQLQSKPENQGLTLHFVEDRLATLRNVIKEPDLDAWNLYLVNWGY 256
           +RIYGLGTGPKVE+LKQLQ +PE+QGLTLHFVEDRLATL+NVIKEP+LD WNLYL NWGY
Sbjct: 181 ERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240

Query: 255 NTQKEREEAASIPRIRLLELSDF 187
           NT +E+EEAA+IPRIR+L+LSDF
Sbjct: 241 NTAQEKEEAAAIPRIRVLQLSDF 263


>ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  419 bits (1077), Expect = e-115
 Identities = 200/263 (76%), Positives = 232/263 (88%)
 Frame = -2

Query: 975 MGHLYALDFDGVLCDSCGESSLSAVKAAKIRWPSLFNGVDTSLENWIVDQMHVVRPVVET 796
           MG LYALDFDGVLCDSCGESSLSAVKAAK+RWP LF+ VD++L++WIVDQMH+VRPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHIVRPVVET 60

Query: 795 GYENXXXXXXXLEIRMPSVRESSVAAGLTIEDTLENWPKLKAVIMNEWSEDRDALIGLFG 616
           GYEN       LE+R+PS+R+SSVA GLT++  L+NW K+K VIM EW+E+RDALI LFG
Sbjct: 61  GYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDALIELFG 120

Query: 615 KVRDEWLEKDFSSWIGANRFYPGVPDTLKFASSKLYIVTTKQSRFADALLQELGGVTIPS 436
           KVRDEW++ D ++WIGANRFYPGVPD LKFASS +YIVTTKQSRFADALLQEL G+ IP 
Sbjct: 121 KVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALLQELAGLKIPP 180

Query: 435 DRIYGLGTGPKVEVLKQLQSKPENQGLTLHFVEDRLATLRNVIKEPDLDAWNLYLVNWGY 256
           +RIYGLGTGPKVEVLKQLQ KPE+QGL LHFVEDRLATL+NVIK+P+LD WNLYL +WGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDGWNLYLGDWGY 240

Query: 255 NTQKEREEAASIPRIRLLELSDF 187
           NT +ER EAASIPRI LL+L+DF
Sbjct: 241 NTHQERGEAASIPRITLLQLTDF 263


>ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp.
           lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein
           ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata]
          Length = 268

 Score =  418 bits (1075), Expect = e-115
 Identities = 199/263 (75%), Positives = 229/263 (87%)
 Frame = -2

Query: 975 MGHLYALDFDGVLCDSCGESSLSAVKAAKIRWPSLFNGVDTSLENWIVDQMHVVRPVVET 796
           MG LYALDFDGVLCDSCGESSLSAVKAAK+RWP LF GVD++LE WIVDQMH+VRPVVET
Sbjct: 1   MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60

Query: 795 GYENXXXXXXXLEIRMPSVRESSVAAGLTIEDTLENWPKLKAVIMNEWSEDRDALIGLFG 616
           GYEN       LE R+PS+R+SSVA GLT++  LE+W K+K VIM  W ED+DALI LFG
Sbjct: 61  GYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDALIDLFG 120

Query: 615 KVRDEWLEKDFSSWIGANRFYPGVPDTLKFASSKLYIVTTKQSRFADALLQELGGVTIPS 436
           KVRD+W+ KD ++WIGANRFYPGV D LKFASSK+YIVTTKQ RFA+ALL+E+ GV IPS
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180

Query: 435 DRIYGLGTGPKVEVLKQLQSKPENQGLTLHFVEDRLATLRNVIKEPDLDAWNLYLVNWGY 256
           +RIYGLG+GPKVEVLK +Q KPE+QGLTLHFVEDRLATL+NVIKEP+LD WNLYL NWGY
Sbjct: 181 ERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240

Query: 255 NTQKEREEAASIPRIRLLELSDF 187
           NT+KER EAASIPRI+++ELS F
Sbjct: 241 NTEKERAEAASIPRIQVIELSTF 263


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