BLASTX nr result
ID: Coptis23_contig00004878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004878
(1972 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275735.1| PREDICTED: tubulin-specific chaperone E [Vit... 707 0.0
ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarp... 682 0.0
ref|XP_002525519.1| tubulin-specific chaperone E, putative [Rici... 681 0.0
ref|XP_004154663.1| PREDICTED: tubulin-specific chaperone E-like... 650 0.0
ref|XP_002888837.1| hypothetical protein ARALYDRAFT_476275 [Arab... 644 0.0
>ref|XP_002275735.1| PREDICTED: tubulin-specific chaperone E [Vitis vinifera]
gi|297741006|emb|CBI31318.3| unnamed protein product
[Vitis vinifera]
Length = 541
Score = 707 bits (1824), Expect = 0.0
Identities = 354/534 (66%), Positives = 429/534 (80%)
Frame = +1
Query: 7 SEASFRVSQRVHGLNDPRRIGTVKYIGPVKGYSGTWVGVDWDSGEGKHNGSINGVTYFET 186
S A FR+ QRVH L DPRR+GTVKY+GPV+GYSGTWVGVDWD+G+ KH+G+++G YF+
Sbjct: 9 SPAEFRLGQRVHSLGDPRRMGTVKYVGPVQGYSGTWVGVDWDNGDAKHDGALDGRRYFQA 68
Query: 187 KAEKSGSFVRGQNLSSGISFLEALELRYRSDSTKEEEDEMYVLSARNKRVAIQLLGKDEL 366
A KSGSFVR NLS+GIS L+AL LRYRS ++KEEE+EMYVLSA N+RV++QL+GK+++
Sbjct: 69 HAAKSGSFVRPHNLSAGISLLQALLLRYRSTTSKEEEEEMYVLSASNRRVSVQLVGKEQI 128
Query: 367 QDRLSRFEELVGVSLSLLGIRSVGPPQQISTVVPNLKELDLTANLLTEWKDVGSICEQLR 546
+D+LSRFEEL SLS LG+ S+G P +I +VVPNLKELDLT NLL+EWKDVG+IC QL
Sbjct: 129 EDKLSRFEELTAASLSYLGVSSIGAPFEICSVVPNLKELDLTGNLLSEWKDVGTICVQLP 188
Query: 547 NLAVLNLSHNHLARDINQLPSLTNIRVLVLNSCGIDWTQVETLKQSLPAVEELHLMGNKL 726
LA LNLS+N +A DI LP L N+RVLVLN+ GI W +VE ++ SLPA+EELHLMGN L
Sbjct: 189 GLAALNLSNNLMAHDITGLPLLMNLRVLVLNNTGIKWKEVEIIRHSLPAIEELHLMGNNL 248
Query: 727 RTIVPAFSDYVQGFDSLRVLNLEDNCFSAWDEILKLSCLKSLEQLHLSKNNLESIFYPNN 906
R I PA S VQGFD LR+LNLEDN + WDEILKLS L+SLEQLHL+KN+L+ IFYP++
Sbjct: 249 RAITPASSSIVQGFDYLRLLNLEDNHIAEWDEILKLSQLRSLEQLHLNKNHLKHIFYPDS 308
Query: 907 NVGCDDPMNVSESQGSCFRPFKSLHCLLLGGNKIKDLASVDSLNFYHNLKDIRLSENPIV 1086
+ +N +S +PF++LHCLLLGGN I+DLASVDSLN + LKDIRLSENP+
Sbjct: 309 D-AIHQLLNGIDSLEKGCKPFQNLHCLLLGGNNIEDLASVDSLNSFPMLKDIRLSENPVA 367
Query: 1087 DPAKGGIPRFVLIAHLAKVEILNGSEVRPRERKESEIRYVRFVMSKLQLKTEEIKHLHPR 1266
DP +GGIPRFVLIA L+KVEILNGSEV RERKESEIRYVR V+SK+ EEI LHPR
Sbjct: 368 DPGRGGIPRFVLIARLSKVEILNGSEVSRRERKESEIRYVRLVISKMHGNPEEITRLHPR 427
Query: 1267 FAELKYVHGIEDEKSPTVVAGPQKMASGLLSITLKCVGASIGERPPITKKLPATTTVGKL 1446
FAELK HGIEDE+ T AGPQKMASGLLSI LKC+GASIGE+PP+TKKLPATTT+GKL
Sbjct: 428 FAELKEFHGIEDERPLTGAAGPQKMASGLLSINLKCIGASIGEKPPLTKKLPATTTIGKL 487
Query: 1447 KVLCENFFKLKAVKPRXXXXXXXXXXXXXXDDEMSSLTDLGVGNEATVLVDEEA 1608
K LCE+FFKLK++KPR DDEM+SL DLG+G+E+T+L+DEE+
Sbjct: 488 KNLCESFFKLKSIKPRLFLQEEGSPLPILLDDEMASLMDLGIGSESTILIDEES 541
>ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarpa]
gi|222862817|gb|EEF00324.1| tubulin folding cofactor
[Populus trichocarpa]
Length = 537
Score = 682 bits (1760), Expect = 0.0
Identities = 340/532 (63%), Positives = 416/532 (78%)
Frame = +1
Query: 13 ASFRVSQRVHGLNDPRRIGTVKYIGPVKGYSGTWVGVDWDSGEGKHNGSINGVTYFETKA 192
++F++ QRVH NDPRRIGTVKYIGPV+G+ GTWVGVDWD+GE KH+GS+NGV YFE ++
Sbjct: 8 STFKLDQRVHSTNDPRRIGTVKYIGPVEGHPGTWVGVDWDNGEAKHDGSLNGVRYFEARS 67
Query: 193 EKSGSFVRGQNLSSGISFLEALELRYRSDSTKEEEDEMYVLSARNKRVAIQLLGKDELQD 372
+ SGSFVR QNL++GISF+EAL +RYR T+E+EDEMYVLSA NKRV++QL+GK+++QD
Sbjct: 68 QLSGSFVRAQNLTAGISFIEALYIRYRDQPTQEDEDEMYVLSASNKRVSVQLVGKEKIQD 127
Query: 373 RLSRFEELVGVSLSLLGIRSVGPPQQISTVVPNLKELDLTANLLTEWKDVGSICEQLRNL 552
+LSR EEL G SLS LG+ + G P +I +VPNLKELDLT NLL+EWKDVG ICEQL +L
Sbjct: 128 KLSRLEELTGASLSYLGVSNPGSPNEIRNIVPNLKELDLTGNLLSEWKDVGIICEQLPSL 187
Query: 553 AVLNLSHNHLARDINQLPSLTNIRVLVLNSCGIDWTQVETLKQSLPAVEELHLMGNKLRT 732
A LNLS+N ++ +I LP L +I +LVLN+ GI+WTQ+E LK LP +EELHLMGN +
Sbjct: 188 AALNLSNNSMSHEIVGLPLLKSIHILVLNNTGINWTQIEVLKDLLPVIEELHLMGNGINA 247
Query: 733 IVPAFSDYVQGFDSLRVLNLEDNCFSAWDEILKLSCLKSLEQLHLSKNNLESIFYPNNNV 912
I A S V GFDSLR+LNLE+NC + W+EI+KLS L+SLE+LHL+KNNL IFYP+++
Sbjct: 248 IKTASSSIVHGFDSLRLLNLEENCIAEWNEIVKLSQLRSLEELHLNKNNLNHIFYPDHDT 307
Query: 913 GCDDPMNVSESQGSCFRPFKSLHCLLLGGNKIKDLASVDSLNFYHNLKDIRLSENPIVDP 1092
D + ES PF++L CLLLGGN I DLASVDSLN + L DIRLSENPI DP
Sbjct: 308 -IDKLVGGDESHDQSCIPFQNLRCLLLGGNNIDDLASVDSLNSFPKLIDIRLSENPIADP 366
Query: 1093 AKGGIPRFVLIAHLAKVEILNGSEVRPRERKESEIRYVRFVMSKLQLKTEEIKHLHPRFA 1272
+GGIPRFVL+A LAKVEILNGSEV RERKESEIRYVR VMSKL +EIK HPRF
Sbjct: 367 GRGGIPRFVLVARLAKVEILNGSEVSTRERKESEIRYVRLVMSKLHGNPDEIKQ-HPRFV 425
Query: 1273 ELKYVHGIEDEKSPTVVAGPQKMASGLLSITLKCVGASIGERPPITKKLPATTTVGKLKV 1452
ELK HGIEDE+S GPQKMASGLLS+TLK V SIGE+PP+TKKLPA TT+GKLK+
Sbjct: 426 ELKNFHGIEDERSSVGTTGPQKMASGLLSVTLKSVAPSIGEKPPLTKKLPAATTIGKLKI 485
Query: 1453 LCENFFKLKAVKPRXXXXXXXXXXXXXXDDEMSSLTDLGVGNEATVLVDEEA 1608
LCE FFKL +++P+ DDEM++L D+G+GNE+TVLVDEE+
Sbjct: 486 LCETFFKLGSIRPKLFLQEEGSPLPILLDDEMATLMDVGIGNESTVLVDEES 537
>ref|XP_002525519.1| tubulin-specific chaperone E, putative [Ricinus communis]
gi|223535198|gb|EEF36877.1| tubulin-specific chaperone E,
putative [Ricinus communis]
Length = 533
Score = 681 bits (1758), Expect = 0.0
Identities = 342/530 (64%), Positives = 421/530 (79%)
Frame = +1
Query: 19 FRVSQRVHGLNDPRRIGTVKYIGPVKGYSGTWVGVDWDSGEGKHNGSINGVTYFETKAEK 198
F++ QRVH +DPRRIG VKYIGPV+GYSGTWVGVDWD+GEGKH+GS+NGV YF+ +++K
Sbjct: 7 FKLGQRVHSASDPRRIGMVKYIGPVEGYSGTWVGVDWDNGEGKHDGSVNGVRYFQARSDK 66
Query: 199 SGSFVRGQNLSSGISFLEALELRYRSDSTKEEEDEMYVLSARNKRVAIQLLGKDELQDRL 378
SGSF+R NL+ GIS +EAL +RY+ +STKEEEDEMYVLSA NK+V+++ +GK++++D+L
Sbjct: 67 SGSFIRVPNLNPGISLVEALHIRYKGESTKEEEDEMYVLSASNKKVSVEFVGKEKIKDKL 126
Query: 379 SRFEELVGVSLSLLGIRSVGPPQQISTVVPNLKELDLTANLLTEWKDVGSICEQLRNLAV 558
S+F+EL SL LGI S G P I +VPNLKELDLT NLL+EWKD+G+ICEQL LA
Sbjct: 127 SKFDELKSASLPFLGISSPGSPTDIRNLVPNLKELDLTGNLLSEWKDIGTICEQLPALAA 186
Query: 559 LNLSHNHLARDINQLPSLTNIRVLVLNSCGIDWTQVETLKQSLPAVEELHLMGNKLRTIV 738
LNLS+N ++R I +L L NI +LVLN+ GI+WTQVE L LPA+EELHLMGN + TI+
Sbjct: 187 LNLSNNLMSRTIAELSQLKNIHILVLNNTGINWTQVEVLNHLLPAIEELHLMGNGIGTIM 246
Query: 739 PAFSDYVQGFDSLRVLNLEDNCFSAWDEILKLSCLKSLEQLHLSKNNLESIFYPNNNVGC 918
+ S VQGFDSLR+LNLEDN + W+EILKLS L+SLEQL+L+KN L+ IFYP+ +
Sbjct: 247 SSSSSIVQGFDSLRLLNLEDNFIAEWNEILKLSSLRSLEQLYLNKNRLKRIFYPDADT-I 305
Query: 919 DDPMNVSESQGSCFRPFKSLHCLLLGGNKIKDLASVDSLNFYHNLKDIRLSENPIVDPAK 1098
D + SES PF++L CLLLGGN+I+DLASVDSLN + L D+RLSENPI D +
Sbjct: 306 DKLLTGSESNVEI--PFQNLRCLLLGGNRIEDLASVDSLNSFPRLVDVRLSENPIADTGR 363
Query: 1099 GGIPRFVLIAHLAKVEILNGSEVRPRERKESEIRYVRFVMSKLQLKTEEIKHLHPRFAEL 1278
GGIPRFVLIA L+KVEILNGSEV PRERK+SEIRYVR VMSKLQ T EIK LHPRFA L
Sbjct: 364 GGIPRFVLIARLSKVEILNGSEVTPRERKDSEIRYVRLVMSKLQDNTIEIKELHPRFAVL 423
Query: 1279 KYVHGIEDEKSPTVVAGPQKMASGLLSITLKCVGASIGERPPITKKLPATTTVGKLKVLC 1458
K +HGIEDE+ + PQKMASGL+SITLKCVGASIGE+P ITKKLPAT TVGKLK+LC
Sbjct: 424 KALHGIEDERPSIGTSSPQKMASGLISITLKCVGASIGEKPLITKKLPATATVGKLKILC 483
Query: 1459 ENFFKLKAVKPRXXXXXXXXXXXXXXDDEMSSLTDLGVGNEATVLVDEEA 1608
E+FFKLK++KPR DDEM +L D+G+GN++T+LVDEE+
Sbjct: 484 ESFFKLKSIKPRLFLQEEGSPLPLLLDDEMLTLMDIGIGNDSTILVDEES 533
>ref|XP_004154663.1| PREDICTED: tubulin-specific chaperone E-like [Cucumis sativus]
Length = 538
Score = 650 bits (1677), Expect = 0.0
Identities = 326/533 (61%), Positives = 409/533 (76%)
Frame = +1
Query: 10 EASFRVSQRVHGLNDPRRIGTVKYIGPVKGYSGTWVGVDWDSGEGKHNGSINGVTYFETK 189
++ FR+ QRVH + DPRR GTV +IG ++GYSGTWVGVDWD GKH+GSINGV YF+ K
Sbjct: 8 QSQFRLGQRVHFVGDPRRTGTVAFIGTLEGYSGTWVGVDWDDNNGKHDGSINGVRYFQAK 67
Query: 190 AEKSGSFVRGQNLSSGISFLEALELRYRSDSTKEEEDEMYVLSARNKRVAIQLLGKDELQ 369
+E+SGSFVR QNLS GIS L+ALELRYR DSTKEEEDEMYVLSA +KRV++Q +GKD ++
Sbjct: 68 SERSGSFVRFQNLSLGISLLQALELRYRGDSTKEEEDEMYVLSASDKRVSVQFVGKDLIK 127
Query: 370 DRLSRFEELVGVSLSLLGIRSVGPPQQISTVVPNLKELDLTANLLTEWKDVGSICEQLRN 549
D+LSRFEEL VSLS +G+ S+G P QI +V+PNLK+LDLT NLL++WKD+ IC+QL+
Sbjct: 128 DKLSRFEELTSVSLSYMGVSSLGNPGQIGSVLPNLKQLDLTGNLLSDWKDISIICDQLQA 187
Query: 550 LAVLNLSHNHLARDINQLPSLTNIRVLVLNSCGIDWTQVETLKQSLPAVEELHLMGNKLR 729
L + LS+N L+ +I+ L +IR+LVLN+ GI W QVE LK SLPA+EELHLMGN +
Sbjct: 188 LVAIILSNNLLSCEISGPLQLKHIRILVLNNTGITWMQVEILKHSLPAMEELHLMGNNIS 247
Query: 730 TIVPAFSDYVQGFDSLRVLNLEDNCFSAWDEILKLSCLKSLEQLHLSKNNLESIFYPNNN 909
+ P S V+GF+ LR+LNLE+NC + W+EILKL LKSLEQ+ L+ N L IFYPN N
Sbjct: 248 EVKPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLN 307
Query: 910 VGCDDPMNVSESQGSCFRPFKSLHCLLLGGNKIKDLASVDSLNFYHNLKDIRLSENPIVD 1089
+ ESQG CF PF++L CL LGGN I LAS+D LN + NL DIRLSENPI D
Sbjct: 308 -ELHELFGDVESQGDCF-PFQNLRCLFLGGNNIDHLASIDVLNSFPNLIDIRLSENPIAD 365
Query: 1090 PAKGGIPRFVLIAHLAKVEILNGSEVRPRERKESEIRYVRFVMSKLQLKTEEIKHLHPRF 1269
P +GGIPR+VL+A L+K++++NGSEV PRER++SEIRYVR VMS L EE LHPRF
Sbjct: 366 PMRGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYVRMVMSNLDGNHEETLRLHPRF 425
Query: 1270 AELKYVHGIEDEKSPTVVAGPQKMASGLLSITLKCVGASIGERPPITKKLPATTTVGKLK 1449
ELK +GIED + AGPQK++SGL+SITLKCVGASIGE+PP+TKKLP TT+VGKLK
Sbjct: 426 EELKSFYGIEDNSASVGPAGPQKLSSGLISITLKCVGASIGEKPPVTKKLPPTTSVGKLK 485
Query: 1450 VLCENFFKLKAVKPRXXXXXXXXXXXXXXDDEMSSLTDLGVGNEATVLVDEEA 1608
+LCE+FFKLK++K + +D+M+SL DLGVGNE+ +LVDEE+
Sbjct: 486 MLCESFFKLKSIKLKLYLQEEDSPMPILLEDDMTSLMDLGVGNESNILVDEES 538
>ref|XP_002888837.1| hypothetical protein ARALYDRAFT_476275 [Arabidopsis lyrata subsp.
lyrata] gi|297334678|gb|EFH65096.1| hypothetical protein
ARALYDRAFT_476275 [Arabidopsis lyrata subsp. lyrata]
Length = 531
Score = 644 bits (1661), Expect = 0.0
Identities = 322/537 (59%), Positives = 407/537 (75%), Gaps = 1/537 (0%)
Frame = +1
Query: 1 EKSEASFRVSQRVHGLNDPRRIGTVKYIGPVKGYSGTWVGVDWDS-GEGKHNGSINGVTY 177
E S S+++ QRVH LNDPRR+GTVKY+G V+GYSGTW+GVDWD G+GKHNG++NGV Y
Sbjct: 4 ESSNESYKIGQRVHSLNDPRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGTVNGVFY 63
Query: 178 FETKAEKSGSFVRGQNLSSGISFLEALELRYRSDSTKEEEDEMYVLSARNKRVAIQLLGK 357
F +++ S SFVR QNLS GI+ L+ALELRYR+ STK+EEDEMYVLSA N+RV+IQLLG
Sbjct: 64 FNGRSQSSASFVRSQNLSRGITLLQALELRYRTTSTKDEEDEMYVLSAGNRRVSIQLLGG 123
Query: 358 DELQDRLSRFEELVGVSLSLLGIRSVGPPQQISTVVPNLKELDLTANLLTEWKDVGSICE 537
D++QD+LSRFEEL SLS LG+ S+G +S+++PNLK LDLT NL+++W+++G++CE
Sbjct: 124 DKIQDKLSRFEELTSASLSYLGVSSLGVSSDLSSILPNLKLLDLTGNLISDWEEIGALCE 183
Query: 538 QLRNLAVLNLSHNHLARDINQLPSLTNIRVLVLNSCGIDWTQVETLKQSLPAVEELHLMG 717
QL L LNLS N L+ DI LP L NIRVLVLN+ G+ WTQVE L++SLP +EELHLMG
Sbjct: 184 QLPALTTLNLSCNSLSSDITSLPQLKNIRVLVLNNSGLSWTQVEILRRSLPGLEELHLMG 243
Query: 718 NKLRTIVPAFSDYVQGFDSLRVLNLEDNCFSAWDEILKLSCLKSLEQLHLSKNNLESIFY 897
N + + Q F+SLR+LNL+DNC S W E+LKLS L LEQL+L+KN L IF+
Sbjct: 244 NMISALTSTSPSDGQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLTHIFH 303
Query: 898 PNNNVGCDDPMNVSESQGSCFRPFKSLHCLLLGGNKIKDLASVDSLNFYHNLKDIRLSEN 1077
N G + P S+ PF SL CLLLG N I DLAS+D+LN + L DIRLSEN
Sbjct: 304 SVN--GIESPKKSSD-------PFPSLRCLLLGANSIGDLASIDALNVFPQLVDIRLSEN 354
Query: 1078 PIVDPAKGGIPRFVLIAHLAKVEILNGSEVRPRERKESEIRYVRFVMSKLQLKTEEIKHL 1257
PI DP +GG+PRFVL+A L KV++LNGSEVR RE+K+SEIRYVR VMSKL K+EEI+ L
Sbjct: 355 PISDPVRGGVPRFVLVARLTKVQVLNGSEVRAREKKDSEIRYVRMVMSKLNDKSEEIELL 414
Query: 1258 HPRFAELKYVHGIEDEKSPTVVAGPQKMASGLLSITLKCVGASIGERPPITKKLPATTTV 1437
HPRF ELK +HGIEDE++ +GP+ MASGLLSI LKCVG S+GE+P +TKKLP + TV
Sbjct: 415 HPRFYELKKLHGIEDERASAENSGPKNMASGLLSIALKCVGPSMGEKPELTKKLPGSITV 474
Query: 1438 GKLKVLCENFFKLKAVKPRXXXXXXXXXXXXXXDDEMSSLTDLGVGNEATVLVDEEA 1608
GKLK+LCENFFKLK++KPR DDE ++L D+G+ + +T+LVDEE+
Sbjct: 475 GKLKILCENFFKLKSIKPRLLLQEEGSPFPTALDDETATLLDVGICDGSTLLVDEES 531