BLASTX nr result

ID: Coptis23_contig00004877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004877
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146013.1| PREDICTED: probable sodium/metabolite cotran...    62   6e-08
ref|XP_002283695.1| PREDICTED: uncharacterized sodium-dependent ...    59   3e-07
emb|CBI20101.3| unnamed protein product [Vitis vinifera]               59   3e-07
emb|CAN78610.1| hypothetical protein VITISV_026295 [Vitis vinifera]    59   3e-07
ref|XP_002889199.1| bile acid:sodium symporter family protein [A...    58   9e-07

>ref|XP_004146013.1| PREDICTED: probable sodium/metabolite cotransporter BASS1,
           chloroplastic-like [Cucumis sativus]
           gi|449503646|ref|XP_004162106.1| PREDICTED: probable
           sodium/metabolite cotransporter BASS1,
           chloroplastic-like [Cucumis sativus]
          Length = 414

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +3

Query: 189 LPCTASSDNNIGSTSEGSDGGERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350
           L C  SS+ N       S  GERS+ +WIE++GE LSTAFPVWVALGC  GL+R
Sbjct: 87  LRCEPSSNGN-------SVQGERSLMQWIELIGEALSTAFPVWVALGCVLGLLR 133


>ref|XP_002283695.1| PREDICTED: uncharacterized sodium-dependent transporter yocS-like
           [Vitis vinifera]
          Length = 420

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
 Frame = +3

Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248
           TSL  P      P F  PT            +  APLH  +P              G   
Sbjct: 53  TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 100

Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350
           G RS   WIE+VGE LSTAFPVWVALGC  GL+R
Sbjct: 101 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 134


>emb|CBI20101.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
 Frame = +3

Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248
           TSL  P      P F  PT            +  APLH  +P              G   
Sbjct: 53  TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 100

Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350
           G RS   WIE+VGE LSTAFPVWVALGC  GL+R
Sbjct: 101 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 134


>emb|CAN78610.1| hypothetical protein VITISV_026295 [Vitis vinifera]
          Length = 791

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
 Frame = +3

Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248
           TSL  P      P F  PT            +  APLH  +P              G   
Sbjct: 400 TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 447

Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350
           G RS   WIE+VGE LSTAFPVWVALGC  GL+R
Sbjct: 448 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 481


>ref|XP_002889199.1| bile acid:sodium symporter family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335040|gb|EFH65458.1| bile
           acid:sodium symporter family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 399

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/91 (36%), Positives = 52/91 (57%)
 Frame = +3

Query: 78  KPFSFSKSLTTSLPSPFLKLKTPHFFKPTTVTAPLHYLPCTASSDNNIGSTSEGSDGGER 257
           +  SFS+ L+ S  S  + LKT     P +      ++P +  S N++ +  +      +
Sbjct: 31  RTISFSR-LSYSSSSREISLKTQSTV-PISCRRRFDFVPRSGISSNDLPTEKK------K 82

Query: 258 SIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350
           S G+W+E VGE +STAFP+WV+LGC  GL+R
Sbjct: 83  SFGEWVEFVGEAVSTAFPIWVSLGCLLGLMR 113


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