BLASTX nr result
ID: Coptis23_contig00004877
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004877 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146013.1| PREDICTED: probable sodium/metabolite cotran... 62 6e-08 ref|XP_002283695.1| PREDICTED: uncharacterized sodium-dependent ... 59 3e-07 emb|CBI20101.3| unnamed protein product [Vitis vinifera] 59 3e-07 emb|CAN78610.1| hypothetical protein VITISV_026295 [Vitis vinifera] 59 3e-07 ref|XP_002889199.1| bile acid:sodium symporter family protein [A... 58 9e-07 >ref|XP_004146013.1| PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic-like [Cucumis sativus] gi|449503646|ref|XP_004162106.1| PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic-like [Cucumis sativus] Length = 414 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/54 (57%), Positives = 37/54 (68%) Frame = +3 Query: 189 LPCTASSDNNIGSTSEGSDGGERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350 L C SS+ N S GERS+ +WIE++GE LSTAFPVWVALGC GL+R Sbjct: 87 LRCEPSSNGN-------SVQGERSLMQWIELIGEALSTAFPVWVALGCVLGLLR 133 >ref|XP_002283695.1| PREDICTED: uncharacterized sodium-dependent transporter yocS-like [Vitis vinifera] Length = 420 Score = 59.3 bits (142), Expect = 3e-07 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%) Frame = +3 Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248 TSL P P F PT + APLH +P G Sbjct: 53 TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 100 Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350 G RS WIE+VGE LSTAFPVWVALGC GL+R Sbjct: 101 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 134 >emb|CBI20101.3| unnamed protein product [Vitis vinifera] Length = 420 Score = 59.3 bits (142), Expect = 3e-07 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%) Frame = +3 Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248 TSL P P F PT + APLH +P G Sbjct: 53 TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 100 Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350 G RS WIE+VGE LSTAFPVWVALGC GL+R Sbjct: 101 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 134 >emb|CAN78610.1| hypothetical protein VITISV_026295 [Vitis vinifera] Length = 791 Score = 59.3 bits (142), Expect = 3e-07 Identities = 39/94 (41%), Positives = 43/94 (45%), Gaps = 13/94 (13%) Frame = +3 Query: 108 TSLPSPFLKLKTPHFFKPT------------TVTAPLHY-LPCTASSDNNIGSTSEGSDG 248 TSL P P F PT + APLH +P G Sbjct: 400 TSLSQPHPPRNEPLFTTPTESISTRRRTRLVSFVAPLHSRIPLN------------GKSH 447 Query: 249 GERSIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350 G RS WIE+VGE LSTAFPVWVALGC GL+R Sbjct: 448 GSRSFRGWIEVVGEALSTAFPVWVALGCLLGLIR 481 >ref|XP_002889199.1| bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297335040|gb|EFH65458.1| bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata] Length = 399 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/91 (36%), Positives = 52/91 (57%) Frame = +3 Query: 78 KPFSFSKSLTTSLPSPFLKLKTPHFFKPTTVTAPLHYLPCTASSDNNIGSTSEGSDGGER 257 + SFS+ L+ S S + LKT P + ++P + S N++ + + + Sbjct: 31 RTISFSR-LSYSSSSREISLKTQSTV-PISCRRRFDFVPRSGISSNDLPTEKK------K 82 Query: 258 SIGKWIEMVGEVLSTAFPVWVALGCFFGLVR 350 S G+W+E VGE +STAFP+WV+LGC GL+R Sbjct: 83 SFGEWVEFVGEAVSTAFPIWVSLGCLLGLMR 113