BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004871
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   673   0.0  
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   671   0.0  
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   642   0.0  
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   650   0.0  
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   655   0.0  

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
            gi|222835491|gb|EEE73926.1| f-box family protein [Populus
            trichocarpa]
          Length = 534

 Score =  673 bits (1736), Expect(2) = 0.0
 Identities = 321/445 (72%), Positives = 382/445 (85%)
 Frame = +3

Query: 33   NRSIKSRSPAAHIISPPPLQTFITITTTNLENFDFISELPDECLSIIFQSLNSGDRKKCS 212
            NRS   RS +   +   P+Q          E  D+IS+LPDECL+ IFQSLNSGDRK CS
Sbjct: 17   NRSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPDECLACIFQSLNSGDRKHCS 76

Query: 213  LVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDSISKLALKCDRKSVSIGDEALIL 392
            LVC RWLR+EGQSRHRLSL+A+SDL+  +P LF+RFDS++KLALKCDR+S SIGDEAL+ 
Sbjct: 77   LVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLALKCDRRSTSIGDEALVA 136

Query: 393  ISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLSVGSCNFGAKGMNGVINNCGMLE 572
            IS +CRNLTRLKLR+CR+L+D G+ AF++NCK L+KLS GSC FGA+GMN +++NC  LE
Sbjct: 137  ISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTFGARGMNAILDNCASLE 196

Query: 573  ELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYNGQCFGPLIVGAKNLKTLKLFRC 752
            ELS+KRLRGIT+GAA++ +GPG+AA SLKTICLKELYNGQCFGPLI+G+KNLKTLKLFRC
Sbjct: 197  ELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQCFGPLIIGSKNLKTLKLFRC 256

Query: 753  SGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSNCVGLEILHLVKTPECTNVGLVA 932
            SGDWD+LL++ ++ V  +VE+HLERLQVSD GL A+SNC+ LEILHLVKTPECT+ GLV+
Sbjct: 257  SGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLNLEILHLVKTPECTDTGLVS 316

Query: 933  IADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQELVLIGVNPTSLSLGLLAANCQN 1112
            IA+RC+ LRKLH+DGWKTNRIGD+GL A+A+ CPNLQELVLIGVNPT +S+ LLA+NCQN
Sbjct: 317  IAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNLQELVLIGVNPTKISVELLASNCQN 376

Query: 1113 LERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVSDHGMEALAGGCPSLVKVKVKKC 1292
            LERLALCGS+T+GDAEISCIAAKC AL+KLCIK CPVSDHGMEALA GCP+LVKVKVKKC
Sbjct: 377  LERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSDHGMEALANGCPNLVKVKVKKC 436

Query: 1293 RGVTSEGANWLRESRGSLAVNLDTG 1367
            R VT E A+WLR  RGSLAVNLD G
Sbjct: 437  RAVTCECADWLRTKRGSLAVNLDCG 461



 Score = 43.9 bits (102), Expect(2) = 0.0
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = +2

Query: 1469 AGEGGLEENVVEIPPAASQSTAADMASSSNGRSPLYKVKLGFFAGR 1606
            A +GGL ENVVE    A+Q     +ASSS GRS  +K +LG  +G+
Sbjct: 470  ASDGGLLENVVEFHSVANQMPLPSIASSSTGRSTSFKSRLGLLSGK 515


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 325/445 (73%), Positives = 386/445 (86%), Gaps = 4/445 (0%)
 Frame = +3

Query: 45   KSRSPAAHIISP----PPLQTFITITTTNLENFDFISELPDECLSIIFQSLNSGDRKKCS 212
            +S+S +  +ISP     P      +   N E+ D+IS+LPDECL+ IFQSL+  DR++CS
Sbjct: 19   RSKSKSTALISPMQTEEPNDKDDVVLIIN-ESPDYISDLPDECLACIFQSLSPSDRQRCS 77

Query: 213  LVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDSISKLALKCDRKSVSIGDEALIL 392
            LVC RWLR+EGQSRHRLSL A+SDL+  I  LFTRFD+++KLAL+CDRKS SIGDEAL  
Sbjct: 78   LVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDAVTKLALRCDRKSASIGDEALEA 137

Query: 393  ISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLSVGSCNFGAKGMNGVINNCGMLE 572
            ISL+CRNLTRLKLR+CRD++D G+ AF++NCKGL+KLS GSC FGAKGMN V++NC  LE
Sbjct: 138  ISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCASLE 197

Query: 573  ELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYNGQCFGPLIVGAKNLKTLKLFRC 752
            ELS+KRLRGIT+GAA++ IGPG+AA SLKTICLKELYNGQCFGPLI+G+KNL+TLKLFRC
Sbjct: 198  ELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYNGQCFGPLIIGSKNLRTLKLFRC 257

Query: 753  SGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSNCVGLEILHLVKTPECTNVGLVA 932
            SGDWD+LL++ ++ V  +VE+HLERLQVSD GL A+SNC+ LEILHLVKTPECTN+GL +
Sbjct: 258  SGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISNCLDLEILHLVKTPECTNLGLGS 317

Query: 933  IADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQELVLIGVNPTSLSLGLLAANCQN 1112
            IA+RCK LRKLHIDGWK NRIGD+GLIA+A+ CPNLQELVLIGVNPT  SL +LA+NCQN
Sbjct: 318  IAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPNLQELVLIGVNPTKSSLEMLASNCQN 377

Query: 1113 LERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVSDHGMEALAGGCPSLVKVKVKKC 1292
            LERLALCGS+T+GDAEISCIAAKC +L+KLCIK CPVSDHGMEALA GCP+LVKVKVKKC
Sbjct: 378  LERLALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSDHGMEALASGCPNLVKVKVKKC 437

Query: 1293 RGVTSEGANWLRESRGSLAVNLDTG 1367
            RGVT EGA+WLR SRGSLAVNLD+G
Sbjct: 438  RGVTCEGADWLRASRGSLAVNLDSG 462



 Score = 43.9 bits (102), Expect(2) = 0.0
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 1469 AGEGGLEENVVEIPPAASQSTAADMASSSN-GRSPLYKVKLGFFAGR 1606
            A +GG++EN VEIPP    +    +ASSS  GRS  +K +LG  +GR
Sbjct: 471  ASDGGVQENAVEIPPGQIAAVVPSVASSSTAGRSTSFKSRLGLLSGR 517


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  642 bits (1657), Expect(2) = 0.0
 Identities = 317/440 (72%), Positives = 372/440 (84%), Gaps = 1/440 (0%)
 Frame = +3

Query: 51   RSPAAHIISPPPLQTFITITTTNL-ENFDFISELPDECLSIIFQSLNSGDRKKCSLVCTR 227
            RS +  ++  P +Q    +    + E+ D+IS+LPDECL+ IFQSL SGDRK+CSLVC R
Sbjct: 24   RSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDECLACIFQSLGSGDRKQCSLVCRR 83

Query: 228  WLRVEGQSRHRLSLDARSDLISYIPLLFTRFDSISKLALKCDRKSVSIGDEALILISLKC 407
            WLR+EGQ+RHRLSL+A SDL++ +P LF+RFD+++KLALKCDR+SVSIGD+ALILISL C
Sbjct: 84   WLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKLALKCDRRSVSIGDDALILISLGC 143

Query: 408  RNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLSVGSCNFGAKGMNGVINNCGMLEELSVK 587
            RNLTRLKLR CR+L+D G+  F++NCKGL+KLS GSC FGAKGM+ V++NC  LEELSVK
Sbjct: 144  RNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSCTFGAKGMSAVLDNCSALEELSVK 203

Query: 588  RLRGITEGAASDLIGPGVAAGSLKTICLKELYNGQCFGPLIVGAKNLKTLKLFRCSGDWD 767
            RLRGI++G+A D IGPGVAA SLKTICLKE YNGQCF PLI+GAKNL+TLKLFRCSGD D
Sbjct: 204  RLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCFWPLIIGAKNLRTLKLFRCSGDCD 263

Query: 768  RLLEMFAENVRCLVEVHLERLQVSDRGLGAVSNCVGLEILHLVKTPECTNVGLVAIADRC 947
             LL++ A     +VE+HLERLQVSD GL A+S+ + LEILHLVKT ECTN GLV++A+RC
Sbjct: 264  NLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDLEILHLVKTSECTNAGLVSVAERC 323

Query: 948  KHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQELVLIGVNPTSLSLGLLAANCQNLERLA 1127
            K LRKLHIDGWK NRIGDEGL A+A+ CPNLQELVLIGVNPT LSL +LAANCQNLERLA
Sbjct: 324  KLLRKLHIDGWKANRIGDEGLSAVAKCCPNLQELVLIGVNPTKLSLEMLAANCQNLERLA 383

Query: 1128 LCGSETIGDAEISCIAAKCRALRKLCIKGCPVSDHGMEALAGGCPSLVKVKVKKCRGVTS 1307
            LC S+T+GDAEISCIAAKC AL+KLCIK CPVSD GM ALA GCP+LVKVKVKKCR VT 
Sbjct: 384  LCASDTVGDAEISCIAAKCLALKKLCIKSCPVSDQGMRALACGCPNLVKVKVKKCRAVTY 443

Query: 1308 EGANWLRESRGSLAVNLDTG 1367
            EGA+ LR SR SLAVNLDTG
Sbjct: 444  EGADGLRASRESLAVNLDTG 463



 Score = 55.8 bits (133), Expect(2) = 0.0
 Identities = 27/55 (49%), Positives = 38/55 (69%)
 Frame = +2

Query: 1442 GASDIPEDIAGEGGLEENVVEIPPAASQSTAADMASSSNGRSPLYKVKLGFFAGR 1606
            G ++  +  A +GG +EN VE+PP ASQ+ AA++ASSS+GRS   K +LG   GR
Sbjct: 463  GETEHQDASASDGGAQENAVELPPLASQNGAANIASSSSGRSNSLKARLGLLTGR 517


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
            gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
            At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  650 bits (1678), Expect(2) = 0.0
 Identities = 324/451 (71%), Positives = 379/451 (84%)
 Frame = +3

Query: 15   RRETNLNRSIKSRSPAAHIISPPPLQTFITITTTNLENFDFISELPDECLSIIFQSLNSG 194
            RR++N +   K +S A  +ISP  L     +        DFIS+LPDECL+ IFQSL+S 
Sbjct: 13   RRDSNHSHRSKIKSTA--LISPMHLDETDDVQEIIHGASDFISDLPDECLACIFQSLSSV 70

Query: 195  DRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDSISKLALKCDRKSVSIG 374
            DRK CSLVC RW +VEGQSRHRLSL A +DL S IP LFTRFD+++KLALKCDR+S SI 
Sbjct: 71   DRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKLALKCDRRSTSIR 130

Query: 375  DEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLSVGSCNFGAKGMNGVIN 554
            D++LILISL+CRNLTRLKLR CR+L+D+G+ AF++NCKGL+KLS GSC FGAKGMN V++
Sbjct: 131  DDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSCTFGAKGMNAVLD 190

Query: 555  NCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYNGQCFGPLIVGAKNLKT 734
            NC  LEELSVKRLRGIT+  A   IGPG+A  SLKTICLK+LYN QCFGPL++GAK+L+T
Sbjct: 191  NCSALEELSVKRLRGITDSTAEP-IGPGIAGSSLKTICLKDLYNAQCFGPLLIGAKSLRT 249

Query: 735  LKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSNCVGLEILHLVKTPECT 914
            LKLFRCSGDWD LL + A+ V  LVEVHLERLQVSD GL A+SNC+ LEILHLVKTPECT
Sbjct: 250  LKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDLEILHLVKTPECT 309

Query: 915  NVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQELVLIGVNPTSLSLGLL 1094
            N+G+VA+A+RCK LRKLHIDGWK NRIGDEGL+A+AR C NLQELVLIGVNPT +SL +L
Sbjct: 310  NLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQELVLIGVNPTKVSLEIL 369

Query: 1095 AANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVSDHGMEALAGGCPSLVK 1274
            A+NC+NLERLALCGS+T+GD+EISCIAAKC AL+KLCIK CPVSD GMEALA GCP+LVK
Sbjct: 370  ASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSDQGMEALAEGCPNLVK 429

Query: 1275 VKVKKCRGVTSEGANWLRESRGSLAVNLDTG 1367
            VKVKKCRGVT EGA+ LR SRGSLAVNLD+G
Sbjct: 430  VKVKKCRGVTPEGADSLRLSRGSLAVNLDSG 460



 Score = 47.4 bits (111), Expect(2) = 0.0
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +2

Query: 1442 GASDIPEDIAGEGGLEENVVEIPPAASQSTAADMASSSNGRSPLYKVKLGFFAGR 1606
            G  + P+  A EGG+++NVV+  P  +Q     +ASSS GRS   K +LG  AGR
Sbjct: 460  GEPEHPDASASEGGIQDNVVDFHPIPNQVVPPTIASSSAGRSSSLKSRLGLLAGR 514


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
            gi|222842891|gb|EEE80438.1| f-box family protein [Populus
            trichocarpa]
          Length = 533

 Score =  655 bits (1689), Expect(2) = 0.0
 Identities = 316/451 (70%), Positives = 385/451 (85%)
 Frame = +3

Query: 15   RRETNLNRSIKSRSPAAHIISPPPLQTFITITTTNLENFDFISELPDECLSIIFQSLNSG 194
            RR++NL+     RS +   +   P+Q         +E  D+IS+LPDECL+ IFQSL+SG
Sbjct: 13   RRDSNLS---SQRSKSKFTVPIIPMQVEEQTEYVLVEAPDYISDLPDECLACIFQSLSSG 69

Query: 195  DRKKCSLVCTRWLRVEGQSRHRLSLDARSDLISYIPLLFTRFDSISKLALKCDRKSVSIG 374
            DRK CSLVC RWLR+EGQSRHRLSL+A+SDL+ ++  LF+RFD+++KLALKCDR+SVSIG
Sbjct: 70   DRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLALKCDRRSVSIG 129

Query: 375  DEALILISLKCRNLTRLKLRTCRDLSDLGVVAFSENCKGLRKLSVGSCNFGAKGMNGVIN 554
            DEAL+ IS++CRNLTRLKLR CR+++D G+ AF++NCK L+K S GSC FGAKGMN +++
Sbjct: 130  DEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCAFGAKGMNAMLD 189

Query: 555  NCGMLEELSVKRLRGITEGAASDLIGPGVAAGSLKTICLKELYNGQCFGPLIVGAKNLKT 734
            NC  LE+LSVKRLRGIT+GA ++ IGPG+AA SLKTICLKELYNGQCFGPLI+G+KNLKT
Sbjct: 190  NCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFGPLIIGSKNLKT 249

Query: 735  LKLFRCSGDWDRLLEMFAENVRCLVEVHLERLQVSDRGLGAVSNCVGLEILHLVKTPECT 914
            LKLFRCSGDWD+LL++ A+ V  +VE+HLERLQVSD GL A+SNC+ LEILHLVKTPECT
Sbjct: 250  LKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLEILHLVKTPECT 309

Query: 915  NVGLVAIADRCKHLRKLHIDGWKTNRIGDEGLIAIARRCPNLQELVLIGVNPTSLSLGLL 1094
            ++GLV+IA+RC+ LRKLHIDGWK +RIGD+GL+A+A+ C NLQELVLIGVNPT +SL LL
Sbjct: 310  DIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNLQELVLIGVNPTQISLELL 369

Query: 1095 AANCQNLERLALCGSETIGDAEISCIAAKCRALRKLCIKGCPVSDHGMEALAGGCPSLVK 1274
            A+NCQNLERLALCGS+T+GD EISCIAAKC AL+KLCIK CPVSDHG+EALA GCP+LVK
Sbjct: 370  ASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGLEALANGCPNLVK 429

Query: 1275 VKVKKCRGVTSEGANWLRESRGSLAVNLDTG 1367
            VKVKKCR VT E A+ LR  RGSLAVNLD+G
Sbjct: 430  VKVKKCRAVTYECADLLRMKRGSLAVNLDSG 460



 Score = 40.0 bits (92), Expect(2) = 0.0
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +2

Query: 1469 AGEGGLEENVVEIPPAASQSTAADMASSSNGRSPLYKVKLGFFAGR 1606
            A +GG++ENV E  P  +Q     +A SS GRS  +K + G ++G+
Sbjct: 469  ASDGGVQENVDEFHPVPNQMPLPSIAPSSTGRSTSFKSRFGLWSGK 514