BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004870
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634300.1| PREDICTED: LRR repeats and ubiquitin-like do...   387   e-105
ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like do...   369   1e-99
ref|XP_004138187.1| PREDICTED: LRR repeats and ubiquitin-like do...   367   2e-99
gb|AFK34885.1| unknown [Medicago truncatula]                          366   5e-99
ref|XP_004154946.1| PREDICTED: LRR repeats and ubiquitin-like do...   366   7e-99

>ref|XP_003634300.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
            At2g30105-like [Vitis vinifera]
            gi|297733905|emb|CBI15152.3| unnamed protein product
            [Vitis vinifera]
          Length = 261

 Score =  387 bits (994), Expect = e-105
 Identities = 196/260 (75%), Positives = 218/260 (83%)
 Frame = -1

Query: 1072 MGCVGSKNGDSKASRMARWKSTGIVAMRDCKLKTFPNEVLDLDRTVRTIDLTNNKIVDIP 893
            MGC  SKNGDSKASR+ RWKSTGIVA+RD KLK FP+EVLDLD +VRT+DLT+N++VDIP
Sbjct: 1    MGCCLSKNGDSKASRIGRWKSTGIVALRDSKLKAFPDEVLDLDTSVRTLDLTHNRLVDIP 60

Query: 892  MEICKLINMQRLILAENLIERLPMNLGKLQSLKALTLDGNRITTLPAELGLLVRLERLSI 713
            MEI KLINMQRLILA+NLIERLPMNLGKLQSLK +TLDGN++TTLP ELG+LVRLERLSI
Sbjct: 61   MEISKLINMQRLILADNLIERLPMNLGKLQSLKVMTLDGNQVTTLPDELGMLVRLERLSI 120

Query: 712  SGNLLTCLPETIGXXXXXXXXXXXXXXXXXLPESIGSCYSLEELQANGNSIDELPSSICN 533
            SGNLLTCLPETIG                 LPES+GSC+SLEELQAN NSI+++P+S CN
Sbjct: 121  SGNLLTCLPETIGSLRNLLLLNVSNNKLKCLPESVGSCFSLEELQANDNSIEDIPASFCN 180

Query: 532  LIHLKSLCLNNNNVHQIPQNLLKDCKVLQNLSLHDNPISMDXXXXXXXXXXXETRRKKKF 353
            LIHLKSLCLNNNN++QIP NLLKDCK LQN+SLHDNPISMD           ETRRKKKF
Sbjct: 181  LIHLKSLCLNNNNINQIPPNLLKDCKALQNISLHDNPISMDQFQQMEGFQAFETRRKKKF 240

Query: 352  DKQIDSNVMIGSKGLDEGVD 293
            DKQIDSNVMI SKGLDEGVD
Sbjct: 241  DKQIDSNVMISSKGLDEGVD 260


>ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
            At2g30105-like isoform 1 [Glycine max]
          Length = 261

 Score =  369 bits (946), Expect = 1e-99
 Identities = 190/261 (72%), Positives = 213/261 (81%)
 Frame = -1

Query: 1072 MGCVGSKNGDSKASRMARWKSTGIVAMRDCKLKTFPNEVLDLDRTVRTIDLTNNKIVDIP 893
            MGC  SKN D+KASR ARW+STGIVA+RD KLKTFP+E+L+LDR+VRT+DLT+N+IVDIP
Sbjct: 1    MGCFASKNADTKASRAARWRSTGIVALRDSKLKTFPDEILELDRSVRTLDLTHNRIVDIP 60

Query: 892  MEICKLINMQRLILAENLIERLPMNLGKLQSLKALTLDGNRITTLPAELGLLVRLERLSI 713
            +EI KLIN+QRLILAENLIERLP+NLGKLQSLK + LDGNRIT+LP ELG LVRLER+SI
Sbjct: 61   VEISKLINVQRLILAENLIERLPVNLGKLQSLKLMNLDGNRITSLPDELGQLVRLERISI 120

Query: 712  SGNLLTCLPETIGXXXXXXXXXXXXXXXXXLPESIGSCYSLEELQANGNSIDELPSSICN 533
            SGNLLT LP TIG                 LPES+GSC+SLEELQAN N I++LPSS+CN
Sbjct: 121  SGNLLTSLPATIGSLRNLVLLNVSNNKLQSLPESVGSCFSLEELQANDNLIEDLPSSVCN 180

Query: 532  LIHLKSLCLNNNNVHQIPQNLLKDCKVLQNLSLHDNPISMDXXXXXXXXXXXETRRKKKF 353
            L HLKSLCL+NNNV QIP NLLKDCK LQN+SLH NPISMD           E RRKKKF
Sbjct: 181  LSHLKSLCLDNNNVKQIPLNLLKDCKALQNISLHANPISMDQFQLMEGFQEFEARRKKKF 240

Query: 352  DKQIDSNVMIGSKGLDEGVDL 290
            DKQIDSNVMIGSKGLDEGVDL
Sbjct: 241  DKQIDSNVMIGSKGLDEGVDL 261


>ref|XP_004138187.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
            At2g30105-like [Cucumis sativus]
          Length = 261

 Score =  367 bits (943), Expect = 2e-99
 Identities = 188/261 (72%), Positives = 212/261 (81%)
 Frame = -1

Query: 1072 MGCVGSKNGDSKASRMARWKSTGIVAMRDCKLKTFPNEVLDLDRTVRTIDLTNNKIVDIP 893
            MGC  SKN DSKASR+ARW++TGIVA+RD KLKTFP+EVLD++R+VRT+DLTNNKIVDIP
Sbjct: 1    MGCYASKNADSKASRVARWRATGIVALRDSKLKTFPDEVLDMERSVRTLDLTNNKIVDIP 60

Query: 892  MEICKLINMQRLILAENLIERLPMNLGKLQSLKALTLDGNRITTLPAELGLLVRLERLSI 713
            ME+CKLINMQRL+LA+NLIERLPMNLGKLQSLK + LDGN ITTLP ELG LVRLERLS+
Sbjct: 61   MEVCKLINMQRLVLADNLIERLPMNLGKLQSLKVMILDGNHITTLPDELGQLVRLERLSV 120

Query: 712  SGNLLTCLPETIGXXXXXXXXXXXXXXXXXLPESIGSCYSLEELQANGNSIDELPSSICN 533
            S NLL+ LPETIG                 LPESIGSC+SLEELQAN N +++LPSS+CN
Sbjct: 121  SRNLLSSLPETIGSLRNLLLINVSNNKLKSLPESIGSCFSLEELQANDNLMEDLPSSLCN 180

Query: 532  LIHLKSLCLNNNNVHQIPQNLLKDCKVLQNLSLHDNPISMDXXXXXXXXXXXETRRKKKF 353
            LIHLKSL L+NNN+ Q+P NLLKDCK LQN+SLH NPI MD           E RRKKKF
Sbjct: 181  LIHLKSLRLDNNNIGQLPSNLLKDCKALQNVSLHGNPILMDQFQQMEGFEDFEARRKKKF 240

Query: 352  DKQIDSNVMIGSKGLDEGVDL 290
            DKQIDSNVMI SKGLDEGVDL
Sbjct: 241  DKQIDSNVMISSKGLDEGVDL 261


>gb|AFK34885.1| unknown [Medicago truncatula]
          Length = 261

 Score =  366 bits (940), Expect = 5e-99
 Identities = 186/261 (71%), Positives = 215/261 (82%)
 Frame = -1

Query: 1072 MGCVGSKNGDSKASRMARWKSTGIVAMRDCKLKTFPNEVLDLDRTVRTIDLTNNKIVDIP 893
            MGC+ SKN ++KASR++RW+STGIVA+RD KLKTFP+E++DLDR+VRT+DLT+N+IVDIP
Sbjct: 1    MGCIASKNAETKASRISRWRSTGIVALRDSKLKTFPDEIIDLDRSVRTLDLTHNRIVDIP 60

Query: 892  MEICKLINMQRLILAENLIERLPMNLGKLQSLKALTLDGNRITTLPAELGLLVRLERLSI 713
            +EI KLIN+QRLILA+NLI+RLP+NLGKLQSLK + LDGNRI++LP ELG LVRLERLSI
Sbjct: 61   VEISKLINVQRLILADNLIDRLPVNLGKLQSLKLVNLDGNRISSLPDELGQLVRLERLSI 120

Query: 712  SGNLLTCLPETIGXXXXXXXXXXXXXXXXXLPESIGSCYSLEELQANGNSIDELPSSICN 533
            +GNLLT LP TIG                 LPES+GSC+SLEELQAN N I++LPSS+CN
Sbjct: 121  AGNLLTSLPATIGSLRNLLILNISNNKLHSLPESVGSCFSLEELQANDNLIEDLPSSVCN 180

Query: 532  LIHLKSLCLNNNNVHQIPQNLLKDCKVLQNLSLHDNPISMDXXXXXXXXXXXETRRKKKF 353
            L HLKSLCL+NNNV QIP NLLKDCK LQNLSLH NPISMD           E RRKKKF
Sbjct: 181  LSHLKSLCLDNNNVKQIPMNLLKDCKALQNLSLHGNPISMDQFQQMDGFQEFEARRKKKF 240

Query: 352  DKQIDSNVMIGSKGLDEGVDL 290
            DKQIDSNVMIGSKGLDEGVDL
Sbjct: 241  DKQIDSNVMIGSKGLDEGVDL 261


>ref|XP_004154946.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
            At2g30105-like [Cucumis sativus]
          Length = 261

 Score =  366 bits (939), Expect = 7e-99
 Identities = 187/261 (71%), Positives = 211/261 (80%)
 Frame = -1

Query: 1072 MGCVGSKNGDSKASRMARWKSTGIVAMRDCKLKTFPNEVLDLDRTVRTIDLTNNKIVDIP 893
            MGC  SKN DSKASR+ RW++TGIVA+RD KLKTFP+EVLD++R+VRT+DLTNNKIVDIP
Sbjct: 1    MGCYASKNADSKASRVGRWRATGIVALRDSKLKTFPDEVLDMERSVRTLDLTNNKIVDIP 60

Query: 892  MEICKLINMQRLILAENLIERLPMNLGKLQSLKALTLDGNRITTLPAELGLLVRLERLSI 713
            ME+CKLINMQRL+LA+NLIERLPMNLGKLQSLK + LDGN ITTLP ELG LVRLERLS+
Sbjct: 61   MEVCKLINMQRLVLADNLIERLPMNLGKLQSLKVMILDGNHITTLPDELGQLVRLERLSV 120

Query: 712  SGNLLTCLPETIGXXXXXXXXXXXXXXXXXLPESIGSCYSLEELQANGNSIDELPSSICN 533
            S NLL+ LPETIG                 LPESIGSC+SLEELQAN N +++LPSS+CN
Sbjct: 121  SRNLLSSLPETIGSLRNLLLINVSNNKLKSLPESIGSCFSLEELQANDNLMEDLPSSLCN 180

Query: 532  LIHLKSLCLNNNNVHQIPQNLLKDCKVLQNLSLHDNPISMDXXXXXXXXXXXETRRKKKF 353
            LIHLKSL L+NNN+ Q+P NLLKDCK LQN+SLH NPI MD           E RRKKKF
Sbjct: 181  LIHLKSLRLDNNNIGQLPSNLLKDCKALQNVSLHGNPILMDQFQQMEGFEDFEARRKKKF 240

Query: 352  DKQIDSNVMIGSKGLDEGVDL 290
            DKQIDSNVMI SKGLDEGVDL
Sbjct: 241  DKQIDSNVMISSKGLDEGVDL 261