BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004867
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   126   2e-27
gb|ABV28352.1| nonsense-mediated mRNA decary protein 3 [Taiwania...   126   2e-27
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   126   2e-27
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/71 (81%), Positives = 65/71 (91%)
 Frame = -2

Query: 213 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 34
           VSDFGKND IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406

Query: 33  EEKRLKKRGKP 1
           EEKR +KRGKP
Sbjct: 407 EEKRQRKRGKP 417


>gb|ABV28352.1| nonsense-mediated mRNA decary protein 3 [Taiwania cryptomerioides]
          Length = 515

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/71 (80%), Positives = 64/71 (90%)
 Frame = -2

Query: 213 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 34
           VSDFGKND IFN++THLGHLLNPGDYALG+DLY AN ND+E+DKYK L LPD +L+KKSY
Sbjct: 350 VSDFGKNDTIFNVKTHLGHLLNPGDYALGFDLYGANTNDLEMDKYKGLNLPDVVLVKKSY 409

Query: 33  EEKRLKKRGKP 1
           EEKR KKRGKP
Sbjct: 410 EEKRQKKRGKP 420


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/71 (81%), Positives = 65/71 (91%)
 Frame = -2

Query: 213 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 34
           VSDFGKND IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406

Query: 33  EEKRLKKRGKP 1
           EEKR +KRGKP
Sbjct: 407 EEKRQRKRGKP 417


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/71 (78%), Positives = 66/71 (92%)
 Frame = -2

Query: 213 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 34
           +SDFGKND +FNI+THLGH+L PGDYALGYDL+ AN ND+ELDKYKNLV+P+AIL+KKSY
Sbjct: 348 MSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSY 407

Query: 33  EEKRLKKRGKP 1
           EEKR +KRGKP
Sbjct: 408 EEKRQRKRGKP 418


>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/71 (78%), Positives = 66/71 (92%)
 Frame = -2

Query: 213 VSDFGKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 34
           +SDFGKND +FNI+THLGH+L PGDYALGYDL+ AN ND+ELDKYKNLV+P+AIL+KKSY
Sbjct: 348 MSDFGKNDTMFNIKTHLGHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSY 407

Query: 33  EEKRLKKRGKP 1
           EEKR +KRGKP
Sbjct: 408 EEKRQRKRGKP 418