BLASTX nr result

ID: Coptis23_contig00004866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004866
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313616.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|NP_197606.1| uncharacterized protein [Arabidopsis thaliana] ...   160   1e-37
ref|XP_002328095.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002871966.1| hypothetical protein ARALYDRAFT_489018 [Arab...   159   3e-37
gb|AFK49609.1| unknown [Medicago truncatula]                          158   5e-37

>ref|XP_002313616.1| predicted protein [Populus trichocarpa] gi|222850024|gb|EEE87571.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/86 (94%), Positives = 85/86 (98%)
 Frame = -1

Query: 297 MESFSAKDVSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 118
           MESF+A+D+STIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHV+S
Sbjct: 1   MESFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVLS 60

Query: 117 TSLLGIAAITMANTIAGEETVHKLAS 40
           TSLLGI AITMANTIAGEETVHKLAS
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLAS 86


>ref|NP_197606.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15809944|gb|AAL06899.1| AT5g21070/T10F18_100
           [Arabidopsis thaliana] gi|18958048|gb|AAL79597.1|
           AT5g21070/T10F18_100 [Arabidopsis thaliana]
           gi|332005545|gb|AED92928.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 225

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/86 (93%), Positives = 85/86 (98%)
 Frame = -1

Query: 297 MESFSAKDVSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 118
           M++F+A+D+STIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS
Sbjct: 1   MDTFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 60

Query: 117 TSLLGIAAITMANTIAGEETVHKLAS 40
           TSLLGI AITMANTIAGEETVHKLAS
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLAS 86


>ref|XP_002328095.1| predicted protein [Populus trichocarpa] gi|222837610|gb|EEE75975.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -1

Query: 297 MESFSAKDVSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 118
           MESFSA+D+STIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTA GAVLHV+S
Sbjct: 1   MESFSAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTASGAVLHVLS 60

Query: 117 TSLLGIAAITMANTIAGEETVHKLAS 40
           TSLLGI AITMANTIAGEETVHKLAS
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLAS 86


>ref|XP_002871966.1| hypothetical protein ARALYDRAFT_489018 [Arabidopsis lyrata subsp.
           lyrata] gi|297317803|gb|EFH48225.1| hypothetical protein
           ARALYDRAFT_489018 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = -1

Query: 297 MESFSAKDVSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 118
           M++F+A+D+STIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTL VTAFGAVLHVIS
Sbjct: 1   MDTFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLFVTAFGAVLHVIS 60

Query: 117 TSLLGIAAITMANTIAGEETVHKLAS 40
           TSLLGI AITMANTIAGEETVHKLAS
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLAS 86


>gb|AFK49609.1| unknown [Medicago truncatula]
          Length = 223

 Score =  158 bits (399), Expect = 5e-37
 Identities = 78/86 (90%), Positives = 83/86 (96%)
 Frame = -1

Query: 297 MESFSAKDVSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 118
           M SF+A+D+STIGGIATVS+LHSFIPTHWLPFSIVGRAQKWTLSRTL VTAFGA+LHVIS
Sbjct: 1   MNSFTAEDLSTIGGIATVSILHSFIPTHWLPFSIVGRAQKWTLSRTLFVTAFGAILHVIS 60

Query: 117 TSLLGIAAITMANTIAGEETVHKLAS 40
           TSLLGI AITMANTIAGEETVHKLAS
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLAS 86


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