BLASTX nr result

ID: Coptis23_contig00004863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004863
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48563.1| unknown [Medicago truncatula]                          169   1e-39
ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi...   167   7e-39
ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi...   162   1e-37
gb|AFK33528.1| unknown [Lotus japonicus]                              154   6e-35
gb|ADU56197.1| SAUR family protein [Jatropha curcas]                  151   3e-34

>gb|AFK48563.1| unknown [Medicago truncatula]
          Length = 162

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
 Frame = -2

Query: 756 KKEVGNRKGKTGLINKTLEKCRSIGSGG-GKKFSRLPIDFTSKSKSWPCSPDSQKHDKPK 580
           K+  GN+K   GLI KT E+C+SIG G   K +S      T +SKSWP  P  +++    
Sbjct: 8   KQGKGNKK--IGLITKTWERCKSIGGGHKSKSYSSSVTPTTRRSKSWPGLPRGEEN---- 61

Query: 579 TRRQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVD 400
            R++V PEGCFSVYVG Q QRFVIKT+  NHPLFKMLLEEAE EYG++C+GPL LPC+VD
Sbjct: 62  RRKKVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVD 121

Query: 399 MFYTVLSEIDGDEIRPGCAFAKGYGSYHLVSPSRLLAV 286
           +FY VL E+D +    GC F +   SYHL+SPSR++ +
Sbjct: 122 VFYKVLMEMDNEAPLQGCTFGRSRSSYHLLSPSRMIVL 159


>ref|XP_002299329.1| SAUR family protein [Populus trichocarpa]
           gi|222846587|gb|EEE84134.1| SAUR family protein [Populus
           trichocarpa]
          Length = 160

 Score =  167 bits (422), Expect = 7e-39
 Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 9/159 (5%)
 Frame = -2

Query: 750 EVGNRKGKT--GLINKTLEKCRSIGSGGGKKFSRLPIDFTSKSKSWPCSPDSQK--HDKP 583
           ++   KGKT   LI KT E+C+SIG G  K+ SRL    T KSKS+P    S +  HD+ 
Sbjct: 2   DMSKGKGKTEGNLIIKTWERCKSIGRGS-KRTSRLVRSLTPKSKSYPHIKVSLEDDHDRK 60

Query: 582 KTR-RQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCD 406
            +R R+V PEGCFSVYVG Q+QRFVIKT+  NHPLFKMLLEEAE EYG++ EGPL LPC+
Sbjct: 61  HSRQRRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKMLLEEAESEYGYSSEGPLTLPCN 120

Query: 405 VDMFYTVLSEID----GDEIRPGCAFAKGYGSYHLVSPS 301
           VD+FY VL  ++     D+I  GC FAK YGSYHL+SPS
Sbjct: 121 VDIFYRVLMAVEDTNIDDKIHLGCGFAKNYGSYHLLSPS 159


>ref|XP_002303770.1| SAUR family protein [Populus trichocarpa]
           gi|222841202|gb|EEE78749.1| SAUR family protein [Populus
           trichocarpa]
          Length = 167

 Score =  162 bits (411), Expect = 1e-37
 Identities = 90/162 (55%), Positives = 113/162 (69%), Gaps = 7/162 (4%)
 Frame = -2

Query: 744 GNRKGKTGLINKTLEKCRSIGSGGGKKFSRLPIDFTSKSKSWPCSPDSQK--HDKPKTRR 571
           G  K K  LI KT E+C S G G  K+ SRL    T KSKS P    S +  HD+  +R+
Sbjct: 6   GKGKFKGNLIIKTWERCISFGRGS-KRTSRLERSLTPKSKSCPHIKVSLEDDHDQKHSRK 64

Query: 570 -QVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMF 394
            +V PEGCFSVYVG Q+QRFVIKT+  NHPLFK+LLEEAE EYG+N EGPL LPC+VD+F
Sbjct: 65  SRVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKILLEEAESEYGYNPEGPLTLPCNVDIF 124

Query: 393 YTVLSEID----GDEIRPGCAFAKGYGSYHLVSPSRLLAVGR 280
           Y VL  ++     ++I  GC+FAK YGSYHL+SPSR++ + +
Sbjct: 125 YKVLMAMEDTGIDNKIHRGCSFAKNYGSYHLLSPSRMIVLNQ 166


>gb|AFK33528.1| unknown [Lotus japonicus]
          Length = 171

 Score =  154 bits (388), Expect = 6e-35
 Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 8/167 (4%)
 Frame = -2

Query: 753 KEVGNRKGKTGLINKTLEKCRSIGSGGGKKFSRLPIDFTSKSKSWPCSPDSQKHDKPKTR 574
           K  G++KG   LI KT E+C+SIG G   + +R        SKSWP         + K+ 
Sbjct: 21  KAAGSKKGS--LITKTWERCKSIGRGTTTRITR--------SKSWP--------SRGKST 62

Query: 573 RQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMF 394
             V PEGCFSVYVG Q QRFVIKT+ +NHPLFKMLLEEAE EYG++ +GP+VLPC+VD+F
Sbjct: 63  TVVAPEGCFSVYVGQQMQRFVIKTEYVNHPLFKMLLEEAESEYGYSSQGPIVLPCNVDVF 122

Query: 393 YTVLSEIDGDEIRP------GCAFAK--GYGSYHLVSPSRLLAVGRV 277
           Y VL E+D +   P      GCAF K     SYHL SPSR+LA+  +
Sbjct: 123 YKVLMEMDEETSTPDQPQPHGCAFVKQRSRSSYHLPSPSRMLAINHL 169


>gb|ADU56197.1| SAUR family protein [Jatropha curcas]
          Length = 182

 Score =  151 bits (382), Expect = 3e-34
 Identities = 89/175 (50%), Positives = 113/175 (64%), Gaps = 16/175 (9%)
 Frame = -2

Query: 762 MEKKEVGNRKGKTGLINKTLEKCRSIGSGGGKKFSRLPIDFTSKSKSWPCSP-------- 607
           M+  +V  RKG   LI KT E+C+S+G    KK SR+    T+KSKSWP  P        
Sbjct: 1   MDVIKVKERKGN--LIIKTWERCKSLGRSS-KKTSRIVKSLTAKSKSWPRVPPLIHDEGQ 57

Query: 606 -DSQKHDKPKT---RRQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGH 439
            D Q +   K    +R+V PEGCFSV VG Q+QRF IKT+  NHPLFK+LLEEAE EYG+
Sbjct: 58  EDDQDNKNKKCSSRKRKVTPEGCFSVCVGPQKQRFFIKTEYANHPLFKILLEEAESEYGY 117

Query: 438 NCEGPLVLPCDVDMFYTVLSEI-DGDEIR---PGCAFAKGYGSYHLVSPSRLLAV 286
           N EGPL LPC+VD+F  VLS + D +E      GC F+K + SY L+SPSR++A+
Sbjct: 118 NPEGPLALPCNVDIFVEVLSAMADNEETTNRIHGCGFSKNFNSYRLLSPSRMVAI 172


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