BLASTX nr result

ID: Coptis23_contig00004855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004855
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW74406.1| putative leucine-rich repeat receptor-like protei...    80   2e-13
ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002459535.1| hypothetical protein SORBIDRAFT_02g006240 [S...    79   4e-13
ref|XP_003616663.1| Receptor kinase-like protein [Medicago trunc...    79   4e-13
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    78   9e-13

>gb|AFW74406.1| putative leucine-rich repeat receptor-like protein kinase family
            protein [Zea mays]
          Length = 1003

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = +3

Query: 3    LLEMFTAKRPTDDMFKDGFSLHLFCKMALPHKLLEVIDMRLLSEETQSKAPNVTNHLTEC 182
            LLEMFT + PTDDMF DG SLHLF +MALP KL E++D  LL  +      N  + +  C
Sbjct: 904  LLEMFTGRAPTDDMFIDGLSLHLFAEMALPDKLTEIVDAVLLEVQPYENTANY-DKILAC 962

Query: 183  LSSVMRIGVKCSEE 224
            L+SV+R+G+ CS++
Sbjct: 963  LASVVRVGISCSKQ 976


>ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = +3

Query: 3    LLEMFTAKRPTDDMFKDGFSLHLFCKMALPHKLLEVIDMRLLSEETQSKAPNVTNHLTEC 182
            LLEM T KRPTD MFKDG  LH + K+ALP +++++ D +LL+E  Q K    T+ + EC
Sbjct: 908  LLEMITGKRPTDSMFKDGLELHSYVKIALPDRVVDIADPKLLTEVDQGKG---TDQIVEC 964

Query: 183  LSSVMRIGVKCSEE 224
            L S+ +IGV CSE+
Sbjct: 965  LISISKIGVFCSEK 978


>ref|XP_002459535.1| hypothetical protein SORBIDRAFT_02g006240 [Sorghum bicolor]
            gi|241922912|gb|EER96056.1| hypothetical protein
            SORBIDRAFT_02g006240 [Sorghum bicolor]
          Length = 1047

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = +3

Query: 3    LLEMFTAKRPTDDMFKDGFSLHLFCKMALPHKLLEVIDMRLLSEETQSKAPNVTNHLT-- 176
            LLE+FTAKRPTDDMF+DG SLH + + ALP K++E+ D  L   +  S + N T H+T  
Sbjct: 946  LLEIFTAKRPTDDMFRDGLSLHGYAEAALPDKVMEIADSNLWLHDEASNS-NDTRHITRS 1004

Query: 177  -ECLSSVMRIGVKCSEEL 227
             +CLS+++++GV CS++L
Sbjct: 1005 RKCLSAIIQLGVLCSKQL 1022


>ref|XP_003616663.1| Receptor kinase-like protein [Medicago truncatula]
            gi|355517998|gb|AES99621.1| Receptor kinase-like protein
            [Medicago truncatula]
          Length = 1010

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/74 (50%), Positives = 49/74 (66%)
 Frame = +3

Query: 3    LLEMFTAKRPTDDMFKDGFSLHLFCKMALPHKLLEVIDMRLLSEETQSKAPNVTNHLTEC 182
            LLEM T KRPTD+MF +  +LH FCKM +P ++LEV+D R L    + +   V N++ EC
Sbjct: 913  LLEMLTGKRPTDNMFYENLTLHKFCKMRIPEEILEVVDSRCLIPLVEDQTRVVENNIKEC 972

Query: 183  LSSVMRIGVKCSEE 224
            L    +IGV CSEE
Sbjct: 973  LVMFAKIGVACSEE 986


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
 Frame = +3

Query: 3    LLEMFTAKRPTDDMFKDGFSLHLFCKMALPHKLLEVIDMRLLSEETQSKAPNVTNH---- 170
            LLEMFT KRPTD MF DG +LH F KMAL  +++E+ D  L+ E +++   N+ NH    
Sbjct: 1230 LLEMFTGKRPTDHMFSDGLNLHSFSKMALLERVMEIADSNLVGESSEA-INNIENHCDME 1288

Query: 171  --LTECLSSVMRIGVKCSEE 224
                 CL+S+ RIGV CSEE
Sbjct: 1289 GRTQHCLASIARIGVACSEE 1308


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