BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004852
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   577   e-162
gb|ABR16597.1| unknown [Picea sitchensis]                             536   e-150
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   536   e-150
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   535   e-150
ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group] g...   509   e-142

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  577 bits (1488), Expect = e-162
 Identities = 286/380 (75%), Positives = 331/380 (87%), Gaps = 3/380 (0%)
 Frame = +1

Query: 127  MSLEPFNKLVKLAARAFYDDISTKGDNQLKTARGDNRGMAVVVLDALTRRQWVREEDLAK 306
            MS+EPFN+LVKLAARAFYDDI+TKGDNQ KT R DNRG+AVVVLDALTRRQWVREEDLAK
Sbjct: 1    MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 307  DLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKL 486
            DLKLHSKQLRRTLRFFEEEKLVTRDHR+ETAKGAK++SAA+AAT DG QT KEG+EKIKL
Sbjct: 61   DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQT-KEGDEKIKL 119

Query: 487  HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTAFDALQLVS 666
            HTHSYCCLDYAQIYDVVRYRLHRM+KKLKDELE++NTVQEY+CP+C +RY A DAL+L+S
Sbjct: 120  HTHSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLIS 179

Query: 667  PDDESFRCESCRGELVAESDKFAAEE-GDIDDNARKRRREKLKDILQKMEVQLKPLTDQL 843
             +DE F CESC GELVAESDK A++E GD DDNAR+RRREKLKD+LQKMEVQLKPL DQL
Sbjct: 180  MEDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQL 239

Query: 844  ARVRDLPVPEYGSLQAWEXXXXXXXXXXNGDPSVNDPSRSSLGQGFSGTPMPYVGETKVE 1023
            +RV+DLPVPE+GSLQAWE          NGD + ND S+SS G GF GTPMP+VGETKVE
Sbjct: 240  SRVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVE 299

Query: 1024 VALSGVAVMEEDTKPEA--GAMKVVPPWLIKQGMNLTSEQRGDLKQDLEMENSSATEGSS 1197
            VA SGV V EED+K E    ++KV+PPW+IK+GMNLT EQRG++KQ+ +M +SSA  GSS
Sbjct: 300  VAFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSS 359

Query: 1198 EDKKSRVDEKDEKSIQDEYV 1257
            +DKKS  ++ +EK++QDEYV
Sbjct: 360  DDKKSTTNKDEEKNLQDEYV 379


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  536 bits (1382), Expect = e-150
 Identities = 257/380 (67%), Positives = 321/380 (84%), Gaps = 3/380 (0%)
 Frame = +1

Query: 127  MSLEPFNKLVKLAARAFYDDISTKGDNQLKTARGDNRGMAVVVLDALTRRQWVREEDLAK 306
            MS EPF +LV+L ARAFYDD +T+ +NQ K+ R DNRGMAVVVLDALTRRQWV+E+DLAK
Sbjct: 1    MSAEPFKRLVRLVARAFYDDTTTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAK 60

Query: 307  DLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKL 486
            DLKLHSKQLRRTLRFFEEE+L+TRDHR+ETAKGAK+F+AA+AATADG Q GKEGEEK+KL
Sbjct: 61   DLKLHSKQLRRTLRFFEEERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKL 120

Query: 487  HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTAFDALQLVS 666
            HTHSYCCLDYAQ YDVVRYR+HRM+K+LKDELE+RNT+QEY+CP+C RRY+A DALQL+S
Sbjct: 121  HTHSYCCLDYAQTYDVVRYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLIS 180

Query: 667  PDDESFRCESCRGELVAESDKFAAEE-GDIDDNARKRRREKLKDILQKMEVQLKPLTDQL 843
              ++SF CE+C  ELVAESDK AAEE GD +DN R+RRREKLK++L+KMEVQLKPL +QL
Sbjct: 181  FTEDSFHCENCNSELVAESDKLAAEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQL 240

Query: 844  ARVRDLPVPEYGSLQAWEXXXXXXXXXXNGDPSVNDPSRSSLGQGFSGTPMPYVGETKVE 1023
             RV+DLPVPE+GSL  WE          +GD + N+ S+SS GQGF GTPMP++GETKVE
Sbjct: 241  TRVKDLPVPEFGSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVE 300

Query: 1024 VALSGVAVMEEDTKPEAGAMKVVPPWLIKQGMNLTSEQRGDLKQDLEMENSSATEGSSED 1203
            VALSG+ V  ED+K +  ++KV+PPW+I+QGMNLT+EQRG++KQ+L+ +N S+  G + +
Sbjct: 301  VALSGMEVKAEDSKEDVASLKVLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPAVE 360

Query: 1204 KKSRVDEKD--EKSIQDEYV 1257
            KK   DEK   ++++Q+EY+
Sbjct: 361  KKPTDDEKGNIQQNLQEEYL 380


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  536 bits (1380), Expect = e-150
 Identities = 275/380 (72%), Positives = 318/380 (83%), Gaps = 3/380 (0%)
 Frame = +1

Query: 127  MSLEPFNKLVKLAARAFYDDISTKGDNQLKTARGDNRGMAVVVLDALTRRQWVREEDLAK 306
            MS+EPFN+LVKLAARAFYDDI+TKGDNQ KT R DNRG+AVVVLDALTRRQWVREEDLAK
Sbjct: 1    MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 307  DLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKL 486
            +LKLHSKQLRRTLRFFEEEKLVTRDHRKETAK AK+ +AAVA T DGH+T KEG++KIK+
Sbjct: 61   ELKLHSKQLRRTLRFFEEEKLVTRDHRKETAKAAKMHNAAVANTTDGHRT-KEGDDKIKM 119

Query: 487  HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTAFDALQLVS 666
            HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELE++NTVQEY CP+C RRY A DAL+L+S
Sbjct: 120  HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMS 179

Query: 667  PDDESFRCESCRGELVAESDKFAAEE-GDIDDNARKRRREKLKDILQKMEVQLKPLTDQL 843
              DE F CE+C GELVAESDK AA+E GD DDNAR+RRREKLKD+LQKMEVQLKPL  QL
Sbjct: 180  LVDEYFHCENCDGELVAESDKLAAQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQL 239

Query: 844  ARVRDLPVPEYGSLQAWEXXXXXXXXXXNGDPSVNDPSRSSLGQGFSGTPMPYVGETKVE 1023
            +RV+DLPVPE+GSLQ W+          NGD S NDPSRSS  QG+ GTPMP++GETKVE
Sbjct: 240  SRVKDLPVPEFGSLQEWQIHASAAGRAANGDSSYNDPSRSS--QGYGGTPMPFLGETKVE 297

Query: 1024 VALSGVAVMEEDTKPEAGA--MKVVPPWLIKQGMNLTSEQRGDLKQDLEMENSSATEGSS 1197
            V+ SGV   +ED K E  +  +KV+PPW+IKQGMNLT EQRG++KQ  +M++SSA     
Sbjct: 298  VSFSGVE-GKEDLKSETASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPP 356

Query: 1198 EDKKSRVDEKDEKSIQDEYV 1257
            +DKK  ++  D+  I+DEYV
Sbjct: 357  DDKKISIENDDK--IKDEYV 374


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  535 bits (1379), Expect = e-150
 Identities = 267/380 (70%), Positives = 316/380 (83%), Gaps = 3/380 (0%)
 Frame = +1

Query: 127  MSLEPFNKLVKLAARAFYDDISTKGDNQLKTARGDNRGMAVVVLDALTRRQWVREEDLAK 306
            MS+EPFN+LVKLAARAFYDDI+TKGDNQ KT R DNRG+AVVVLDALTRRQWVREEDLAK
Sbjct: 1    MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK 60

Query: 307  DLKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKL 486
            +LKLHSKQLRRTLRF EEEKL+TRDHR+ETAKGAK+FSAAVAATADG    KEG+EKIK+
Sbjct: 61   NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKM 120

Query: 487  HTHSYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTAFDALQLVS 666
            HTHSYC LDYAQ+YDVVRYR+HRM+KKLKDELE++NTVQEY+CP+C RRYTA DAL+L+S
Sbjct: 121  HTHSYCSLDYAQVYDVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS 180

Query: 667  PDDESFRCESCRGELVAESDKFAAEEG-DIDDNARKRRREKLKDILQKMEVQLKPLTDQL 843
             +DE F CE+C GELVAESDK AA +G D DDN RKRR EKLKD+LQKME QLKPL +QL
Sbjct: 181  FEDEYFHCENCNGELVAESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQL 240

Query: 844  ARVRDLPVPEYGSLQAWEXXXXXXXXXXNGDPSVNDPSRSSLGQGFSGTPMPYVGETKVE 1023
            +RV+DLPVPE+G+L AWE          NGD + NDPS+SS  QG+ GTPMP+VGETKVE
Sbjct: 241  SRVKDLPVPEFGTLLAWEARASAAARGINGDLNGNDPSKSS--QGYGGTPMPFVGETKVE 298

Query: 1024 VALSGVAVMEEDTKPEA--GAMKVVPPWLIKQGMNLTSEQRGDLKQDLEMENSSATEGSS 1197
            VA SG      D K E+   ++KV+PPW+IK+GMNLT EQRG++K + + +  SA+   S
Sbjct: 299  VAFSGAEGTGVDAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFS 358

Query: 1198 EDKKSRVDEKDEKSIQDEYV 1257
            +DKKS  ++ D+ +IQDEYV
Sbjct: 359  DDKKSLANDDDKTNIQDEYV 378


>ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group]
            gi|38637014|dbj|BAD03272.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623563|dbj|BAF23508.1| Os08g0343300
            [Oryza sativa Japonica Group] gi|125561187|gb|EAZ06635.1|
            hypothetical protein OsI_28884 [Oryza sativa Indica
            Group] gi|125603072|gb|EAZ42397.1| hypothetical protein
            OsJ_26976 [Oryza sativa Japonica Group]
            gi|215695399|dbj|BAG90590.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 462

 Score =  509 bits (1312), Expect = e-142
 Identities = 262/381 (68%), Positives = 305/381 (80%), Gaps = 5/381 (1%)
 Frame = +1

Query: 130  SLEPFNKLVKLAARAFYDDISTKGDNQLKTARGDNRGMAVVVLDALTRRQWVREEDLAKD 309
            S+EPFN+LV+LAARAFYDDIS KGDNQ KT+RGDNRGMAVVVLDALTRRQWVREEDLAK 
Sbjct: 3    SMEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAKA 62

Query: 310  LKLHSKQLRRTLRFFEEEKLVTRDHRKETAKGAKLFSAAVAATADGHQTGKEGEEKIKLH 489
            LKLHSKQLRR LRFFEEEKLVTRDHRKE+AKGAK++SAA AA  DG    KEGEEK+K+H
Sbjct: 63   LKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAAAAAGDGQSITKEGEEKVKMH 122

Query: 490  THSYCCLDYAQIYDVVRYRLHRMRKKLKDELENRNTVQEYVCPSCQRRYTAFDALQLVSP 669
            THSYCCLDYAQI DVVRYR+HRM+KKLKDEL++RNT+Q Y+CP+C++RY+AFDALQL+S 
Sbjct: 123  THSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPNCKKRYSAFDALQLISY 182

Query: 670  DDESFRCESCRGELVAESDKFAAEE-GDIDDNARKRRREKLKDILQKMEVQLKPLTDQLA 846
             DE F CE+C GELVAESDK A+EE GD DDNARKRRREKLKD+ Q+++ QLKPL  QL 
Sbjct: 183  TDEYFHCENCNGELVAESDKLASEEMGDGDDNARKRRREKLKDMQQRIDEQLKPLQAQLN 242

Query: 847  RVRDLPVPEYGSLQAWEXXXXXXXXXXNGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEV 1026
            RV+DLP PE+GSLQ+WE            DPS  D SR+  GQ   GTPMPY+GETKVEV
Sbjct: 243  RVKDLPAPEFGSLQSWE--RANIGAFGTADPSAADSSRNPQGQ--YGTPMPYLGETKVEV 298

Query: 1027 ALSGVAVMEE--DTKPEAGAMKVVPPWLIKQGMNLTSEQRGDLKQDLEMENSSATEGSSE 1200
            ALSG  V +E  ++      +KV+PPW+IKQGMNLT EQRG      E  NSS  +  SE
Sbjct: 299  ALSGTGVKDEGAESGTNGNGLKVLPPWMIKQGMNLTKEQRG------ETSNSSNLDEKSE 352

Query: 1201 --DKKSRVDEKDEKSIQDEYV 1257
              D+K +  ++DEKSIQDEY+
Sbjct: 353  VKDEKKQDSKEDEKSIQDEYI 373