BLASTX nr result

ID: Coptis23_contig00004839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004839
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306542.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
ref|XP_002285693.1| PREDICTED: probable mitochondrial 2-oxogluta...   400   e-109
ref|XP_002274117.1| PREDICTED: probable mitochondrial 2-oxogluta...   399   e-109
ref|XP_002514023.1| mitochondrial dicarboxylate carrier protein,...   397   e-108
ref|XP_004166059.1| PREDICTED: mitochondrial uncoupling protein ...   397   e-108

>ref|XP_002306542.1| predicted protein [Populus trichocarpa] gi|222855991|gb|EEE93538.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  406 bits (1043), Expect = e-111
 Identities = 225/324 (69%), Positives = 242/324 (74%), Gaps = 18/324 (5%)
 Frame = +2

Query: 41  MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGET-------PALRPAYA--------G 175
           MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGE         +LRPAYA         
Sbjct: 1   MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENLPNPQQVHSLRPAYAFNSAAIPHN 60

Query: 176 SV---PGSIPRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWT 346
           SV   P  +PRVGPIS GVRIFQ+EG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT
Sbjct: 61  SVHIPPPPLPRVGPISAGVRIFQSEGVAALFSGVSATVLRQTLYSTTRMGLYDILKQKWT 120

Query: 347 EPESGHMPLVRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPVSERRNYSSVIDAIKR 526
            PE+G+MPL+ K               NPADVAMVRMQADGRLP S+RRNY+SVIDAI R
Sbjct: 121 NPETGNMPLLSKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPSSQRRNYNSVIDAITR 180

Query: 527 MSKQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGXXXXXXXXXX 706
           MSKQEGV SLWRGSSLTVNRAMIVTASQLASYDQIKE IL N +MKDGLG          
Sbjct: 181 MSKQEGVASLWRGSSLTVNRAMIVTASQLASYDQIKEMILENGMMKDGLG---THVTASF 237

Query: 707 XXXXXXXXXXXXXXXXXXXXMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTI 886
                               MNM+VE GK  PYSGA+DCAMKTVK+EG+MALYKGFIPTI
Sbjct: 238 AAGFVAAVASNPIDVIKTRVMNMKVEPGKVAPYSGAIDCAMKTVKAEGIMALYKGFIPTI 297

Query: 887 SRQGPFTVVLFVTLEQVRKVLKDF 958
           SRQGPFTVVLFVTLEQVR++LKDF
Sbjct: 298 SRQGPFTVVLFVTLEQVRELLKDF 321


>ref|XP_002285693.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier
           protein-like [Vitis vinifera]
          Length = 323

 Score =  400 bits (1027), Expect = e-109
 Identities = 218/326 (66%), Positives = 241/326 (73%), Gaps = 20/326 (6%)
 Frame = +2

Query: 41  MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPA-------LRPAYAGS------- 178
           MG+KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGE+         LRPA+A +       
Sbjct: 1   MGLKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGESHVPNQAIHNLRPAFAFNSASATMV 60

Query: 179 -VPGSI-----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTK 340
             P ++     PRVGP+SVGV+I Q EG+ ALFSGVSATVLRQTLYSTTRMG+YD+LK K
Sbjct: 61  GAPSTVHIPPPPRVGPVSVGVKIVQAEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQK 120

Query: 341 WTEPESGHMPLVRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPVSERRNYSSVIDAI 520
           W++P+SG+MPLVRK               NPADVAMVRMQADGRLPV++RRNY  VIDAI
Sbjct: 121 WSDPDSGNMPLVRKIAAGLVAGGIGAAVGNPADVAMVRMQADGRLPVTQRRNYQGVIDAI 180

Query: 521 KRMSKQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGXXXXXXXX 700
            RMSKQEG+ SLWRGS+LTVNRAMIVTASQLASYDQIKETIL   VMKDGLG        
Sbjct: 181 TRMSKQEGIASLWRGSALTVNRAMIVTASQLASYDQIKETILEKGVMKDGLG---THVTA 237

Query: 701 XXXXXXXXXXXXXXXXXXXXXXMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIP 880
                                 MNM+VE G  PPYSGALDCAMKTV++EG MALYKGFIP
Sbjct: 238 SFAAGFVAAVASNPVDVIKTRVMNMKVEPGTAPPYSGALDCAMKTVRAEGPMALYKGFIP 297

Query: 881 TISRQGPFTVVLFVTLEQVRKVLKDF 958
           TISRQGPFTVVLFVTLEQVRK+LKDF
Sbjct: 298 TISRQGPFTVVLFVTLEQVRKILKDF 323


>ref|XP_002274117.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier
           protein [Vitis vinifera] gi|147816254|emb|CAN77545.1|
           hypothetical protein VITISV_025212 [Vitis vinifera]
          Length = 318

 Score =  399 bits (1026), Expect = e-109
 Identities = 219/321 (68%), Positives = 243/321 (75%), Gaps = 15/321 (4%)
 Frame = +2

Query: 41  MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGET----PA---LRPAYA---GSVPGS 190
           MG+KGFVEGGIASI+AGCSTHPLDLIKVRMQLQGET    PA   LRPA A   G+ P +
Sbjct: 1   MGLKGFVEGGIASIIAGCSTHPLDLIKVRMQLQGETQVPNPAVQTLRPALAFQTGAAPTA 60

Query: 191 I-----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEPE 355
           +     PRVGPI+VGVRI Q EG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT+P 
Sbjct: 61  VHVTRPPRVGPITVGVRIVQQEGVVALFSGVSATVLRQTLYSTTRMGLYDILKKKWTDPA 120

Query: 356 SGHMPLVRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMSK 535
           +G+MPLV K               NPADVAMVRMQADGRLP+++RRNY SV+DAI RMSK
Sbjct: 121 TGNMPLVSKIGAGLIAGGIGAVVGNPADVAMVRMQADGRLPLAQRRNYKSVLDAITRMSK 180

Query: 536 QEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGXXXXXXXXXXXXX 715
           QEGVTSLWRGSSLTVNRAM+VTASQLASYDQIKETIL   +MKDGLG             
Sbjct: 181 QEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKETILQKGLMKDGLG---THVTASFAAG 237

Query: 716 XXXXXXXXXXXXXXXXXMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQ 895
                            MNM+VE G  PPY+GALDCA+KTV++EG MALYKGFIPTISRQ
Sbjct: 238 FVAAVASNPVDVIKTRVMNMKVEPGAAPPYTGALDCALKTVRAEGPMALYKGFIPTISRQ 297

Query: 896 GPFTVVLFVTLEQVRKVLKDF 958
           GPFT+VLFVTLEQVRK+LKDF
Sbjct: 298 GPFTIVLFVTLEQVRKLLKDF 318


>ref|XP_002514023.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus
           communis] gi|223547109|gb|EEF48606.1| mitochondrial
           dicarboxylate carrier protein, putative [Ricinus
           communis]
          Length = 317

 Score =  397 bits (1021), Expect = e-108
 Identities = 215/320 (67%), Positives = 237/320 (74%), Gaps = 14/320 (4%)
 Frame = +2

Query: 41  MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPA------LRPAYAGSVPGSI--- 193
           MG K FVEGG+ASIVAGCSTHPLDLIKVRMQLQGE         LRPA+A +   S    
Sbjct: 1   MGAKSFVEGGVASIVAGCSTHPLDLIKVRMQLQGENLPKSQVHNLRPAFAFNSTASAAIH 60

Query: 194 -----PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEPES 358
                PRVGP+SVG+RIFQTEG+ ALFSGVSATVLRQTLYSTTRMG+YDILK KWT P++
Sbjct: 61  VASPPPRVGPVSVGIRIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDILKQKWTRPDT 120

Query: 359 GHMPLVRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMSKQ 538
           G+MPLV K               NPADVAMVRMQADGRLP ++RRNY+ V+DAI RMSKQ
Sbjct: 121 GNMPLVSKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPPAQRRNYNGVLDAITRMSKQ 180

Query: 539 EGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGXXXXXXXXXXXXXX 718
           EG+TSLWRGSSLTVNRAMIVTASQLASYDQIKE IL   VM+DGLG              
Sbjct: 181 EGITSLWRGSSLTVNRAMIVTASQLASYDQIKEAILEKGVMRDGLG---THVTASFAAGF 237

Query: 719 XXXXXXXXXXXXXXXXMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISRQG 898
                           MNM VEAGK  PY+GA+DCA+KTV++EGLMALYKGFIPTISRQG
Sbjct: 238 VAAVASNPVDVIKTRVMNMNVEAGKAAPYNGAIDCALKTVRAEGLMALYKGFIPTISRQG 297

Query: 899 PFTVVLFVTLEQVRKVLKDF 958
           PFTVVLFVTLEQVRK+LKDF
Sbjct: 298 PFTVVLFVTLEQVRKLLKDF 317


>ref|XP_004166059.1| PREDICTED: mitochondrial uncoupling protein 4-like [Cucumis
           sativus]
          Length = 319

 Score =  397 bits (1020), Expect = e-108
 Identities = 217/322 (67%), Positives = 236/322 (73%), Gaps = 16/322 (4%)
 Frame = +2

Query: 41  MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPAL---RPAYAGSVPGSI------ 193
           MG KGF EGGIASIVAGCSTHPLDLIKVRMQL GE P L   RPA A +   S+      
Sbjct: 1   MGFKGFAEGGIASIVAGCSTHPLDLIKVRMQLDGEKPPLPNLRPALAFNASRSLVAPESF 60

Query: 194 -------PRVGPISVGVRIFQTEGIPALFSGVSATVLRQTLYSTTRMGIYDILKTKWTEP 352
                  PRVGPISVGVRI Q+EG+ ALFSGVSATVLRQTLYSTTRMG+YDILKTKW++P
Sbjct: 61  HIPPPQPPRVGPISVGVRIVQSEGVAALFSGVSATVLRQTLYSTTRMGLYDILKTKWSDP 120

Query: 353 ESGHMPLVRKXXXXXXXXXXXXXXXNPADVAMVRMQADGRLPVSERRNYSSVIDAIKRMS 532
           +SG MPL RK               NPADVAMVRMQADGRLPV++RRNY+ V+DAI RMS
Sbjct: 121 DSGSMPLTRKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPVAQRRNYAGVVDAITRMS 180

Query: 533 KQEGVTSLWRGSSLTVNRAMIVTASQLASYDQIKETILANDVMKDGLGXXXXXXXXXXXX 712
           KQEG+TSLWRGS+LTVNRAMIVTA+QLASYDQIKETIL   VMKDGLG            
Sbjct: 181 KQEGITSLWRGSALTVNRAMIVTAAQLASYDQIKETILEKGVMKDGLG---THVTASFAA 237

Query: 713 XXXXXXXXXXXXXXXXXXMNMRVEAGKPPPYSGALDCAMKTVKSEGLMALYKGFIPTISR 892
                             MNM+VEAG+  PYSGALDCAMKTVK+EG MALYKGFIPTISR
Sbjct: 238 GFVAAVASNPVDVIKTRVMNMKVEAGETAPYSGALDCAMKTVKAEGPMALYKGFIPTISR 297

Query: 893 QGPFTVVLFVTLEQVRKVLKDF 958
           QGPFTVVLFVTLEQVRK+   F
Sbjct: 298 QGPFTVVLFVTLEQVRKIFNQF 319


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