BLASTX nr result

ID: Coptis23_contig00004835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004835
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycin...   143   4e-32
ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycin...   141   1e-31
gb|ABK23670.1| unknown [Picea sitchensis] gi|116791757|gb|ABK260...   134   2e-29
ref|XP_003525489.1| PREDICTED: pollen-specific protein SF3-like ...   133   4e-29
ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28

>ref|NP_001235271.1| uncharacterized protein LOC100500501 [Glycine max]
           gi|255630484|gb|ACU15600.1| unknown [Glycine max]
          Length = 192

 Score =  143 bits (360), Expect = 4e-32
 Identities = 60/74 (81%), Positives = 68/74 (91%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNFSQFDK 502
           YPIEKVAVDGT YH+ CF+C HGGCVISPSNYVAHEH+LYCRHHH+QLFK+KGNFSQ DK
Sbjct: 119 YPIEKVAVDGTFYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDK 178

Query: 501 SENSKGVTENTVSE 460
            EN +GVTENT++E
Sbjct: 179 QENDEGVTENTITE 192


>ref|NP_001238190.1| uncharacterized protein LOC100500444 [Glycine max]
           gi|255630349|gb|ACU15531.1| unknown [Glycine max]
          Length = 192

 Score =  141 bits (355), Expect = 1e-31
 Identities = 59/74 (79%), Positives = 67/74 (90%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNFSQFDK 502
           YPIEKVAVDGTSYH+ CF+C HGGCVISPSNYVAHEH+LYCRHHH+QLFK+KGNFSQ DK
Sbjct: 119 YPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDK 178

Query: 501 SENSKGVTENTVSE 460
            EN +GV EN ++E
Sbjct: 179 QENDEGVAENRITE 192


>gb|ABK23670.1| unknown [Picea sitchensis] gi|116791757|gb|ABK26097.1| unknown
           [Picea sitchensis]
          Length = 191

 Score =  134 bits (337), Expect = 2e-29
 Identities = 60/71 (84%), Positives = 63/71 (88%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNFSQFDK 502
           YPIEKVAVDGTSYHRPCFKC HGGCVISPSNYVAHE +LYCRHH SQLF+EKGNFSQ  K
Sbjct: 118 YPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRLYCRHHSSQLFREKGNFSQLAK 177

Query: 501 SENSKGVTENT 469
              +KGVTENT
Sbjct: 178 GTPTKGVTENT 188



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNF----- 517
           Y ++++  D + YH+ CF+C H    +  SNY + E  LYC+ H  QLFK  G+      
Sbjct: 18  YLVDQLTADNSVYHKSCFRCHHCNGTLKLSNYSSFEGVLYCKPHFDQLFKRTGSLDKSFE 77

Query: 516 -----SQFDKSENSKGVTENTVS 463
                S+ DK++ ++  T N VS
Sbjct: 78  AIPRASRNDKTQENESKTPNRVS 100


>ref|XP_003525489.1| PREDICTED: pollen-specific protein SF3-like [Glycine max]
          Length = 215

 Score =  133 bits (334), Expect = 4e-29
 Identities = 55/74 (74%), Positives = 66/74 (89%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNFSQFDK 502
           YPIEKVAVDG SYH+ CF+C HGGCVISPSNY+AHEH+LYCRHHH+QLFK+KGNFSQ DK
Sbjct: 117 YPIEKVAVDGKSYHKSCFRCTHGGCVISPSNYIAHEHRLYCRHHHTQLFKQKGNFSQLDK 176

Query: 501 SENSKGVTENTVSE 460
            EN + +TE T+++
Sbjct: 177 HENVQVITEITITQ 190


>ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|222868567|gb|EEF05698.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  130 bits (328), Expect = 2e-28
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = -2

Query: 681 YPIEKVAVDGTSYHRPCFKCVHGGCVISPSNYVAHEHKLYCRHHHSQLFKEKGNFSQFDK 502
           YP+EKVAVDGTSYH+ CF+C HGGCVISPSNYVAHEH+LYCRHHH+QLFKEKGNFSQF K
Sbjct: 118 YPLEKVAVDGTSYHKACFRCAHGGCVISPSNYVAHEHRLYCRHHHNQLFKEKGNFSQFGK 177

Query: 501 SENSKGVTENTVSE 460
            E+   V E   +E
Sbjct: 178 HEHLTPVDETATAE 191


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