BLASTX nr result
ID: Coptis23_contig00004828
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004828 (1886 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247... 470 e-130 emb|CBI27197.3| unnamed protein product [Vitis vinifera] 445 e-122 ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793... 405 e-110 ref|XP_002329920.1| chromatin remodeling complex subunit [Populu... 402 e-109 ref|XP_002303505.1| chromatin remodeling complex subunit [Populu... 394 e-107 >ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera] Length = 2355 Score = 470 bits (1209), Expect = e-130 Identities = 280/643 (43%), Positives = 362/643 (56%), Gaps = 16/643 (2%) Frame = +2 Query: 2 LAPGAGTSTNTDIKVHETGGDTQNVMDTPPEFPSNRFKSSILDSVFSYSSFPLMNTQGRG 181 LAP +GTS DIK HE D ++D + P + K++ D+ + P Q +G Sbjct: 1617 LAPCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNNNPDNCSPFGPSPPAAPQEKG 1676 Query: 182 SDLFDSSGSAFPTFQDKMALPNLTLEDNRRSKFFLPANSVSKSYPDLFPSLSLGTKVDS- 358 SD + SG+ F F +KMA+ NL ++ +F LPA S+ YPD PSLSLGT+V++ Sbjct: 1677 SDYVERSGAGFSDFPEKMAMANLPFDEKLLPRFPLPARSMPNPYPDFLPSLSLGTRVEAA 1736 Query: 359 --TIHHLPTSTMLQDFRLWPQDMPKLDRLVQEVPPTLGLGLMHGTNSSLPENHQKVLDNI 532 ++ L T +L F+ PQD P+ ++ +E PPTLGLG T SS PENH+KVL+NI Sbjct: 1737 NDSVQDLSTMPLLPKFKFPPQDAPRYNQQEREGPPTLGLGQTPATLSSFPENHRKVLENI 1796 Query: 533 MMRTGPGMHNSFKKRPKVNAWSEDELDVLWVGVRRYGRGNWDYMLRDPKLKFSKHRTSEE 712 MMRTG G N FKK+ +V WSEDELD LW+GVRR+GRGNWD MLRDP+LKFSK++T+++ Sbjct: 1797 MMRTGSGSMNLFKKKSRVEGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKTADD 1856 Query: 713 LSVRWEEELVRIFDEAAQPAPKPANLQS------FSGISDAMMTRALHGGRLSGIGADFY 874 LS RWEEE ++I + A P PK + F ISD MM RALHG RL Sbjct: 1857 LSARWEEEQLKILEGPALPMPKSSKSTKGNKSSLFPSISDGMMMRALHGSRLG------- 1909 Query: 875 APLKSQSHLTDMRLGYGHPTSGLLPVDPSDKFNSGNERYVPPPSWRSDQFHSHFRGDFCA 1054 AP+K QSHLTDM+LG+G S L DPS + N+ + P P W SD+F ++F D + Sbjct: 1910 APMKFQSHLTDMKLGFGDLASSLPHFDPSHRLGLQNDHFSPVPHWNSDKFPTNFVRDSSS 1969 Query: 1055 GPSNRPVTSSNSHLEQPFLPNTF--ASLGTMGMHQSNSHDLQQKELVREANKYVKLPFHF 1228 GPS+RP TSSN H+EQPFL N+F +SLG++G+ S+S DL QKE A KY KLP Sbjct: 1970 GPSDRPGTSSNIHMEQPFLLNSFGTSSLGSLGLTSSSSFDLLQKEDELGATKYGKLPSLL 2029 Query: 1229 DKSPNYVHNLHTS----DSISTRSLLDQNKQLYFGHPSVANDATGSESSKKKLPRWLQEA 1396 D+S N + + H + +S S+ + D NK L + S + GS SK KLP WL+EA Sbjct: 2030 DRSLNLLRDSHNNMGAGESTSSGLMPDPNKGLSLSN-SKGKEVEGSSPSKNKLPHWLREA 2088 Query: 1397 VSGXXXXXXXXXXXTVSAIAQSVRLLYGEDKPSIPPF-RVXXXXXXXXXXXXXXXXXXXX 1573 VS TVSAIAQSVRLLYGE+KP+IPPF Sbjct: 2089 VSAPSKPPDPELPPTVSAIAQSVRLLYGEEKPTIPPFVAPGPPPSLPKDPRLNLKKKKRR 2148 Query: 1574 XXXXXXXSADIATTSKNFEKSLLGDSLASGSTLXRGSADIATTSKNFEKSLLGDSLASGS 1753 S D+A TS NF+ SL G++ AS S LA Sbjct: 2149 SHVLRRLSGDVAGTSWNFQSSLHGENFASSSV----------------------PLAPP- 2185 Query: 1754 TLLAPSLPSSMARPLGFPWIEAPKNLPSLNLNMTTSQPLSSFV 1882 P LP + A G PWIE NLP LN+NM SSF+ Sbjct: 2186 ---FPLLPQNTAGASGLPWIEPNLNLPPLNINMMNPSSSSSFL 2225 >emb|CBI27197.3| unnamed protein product [Vitis vinifera] Length = 1638 Score = 445 bits (1144), Expect = e-122 Identities = 246/517 (47%), Positives = 321/517 (62%), Gaps = 15/517 (2%) Frame = +2 Query: 2 LAPGAGTSTNTDIKVHETGGDTQNVMDTPPEFPSNRFKSSILDSVFSYSSFPLMNTQGRG 181 LAP +GTS DIK HE D ++D + P + K++ D+ + P Q +G Sbjct: 1004 LAPCSGTSMEMDIKGHENASDKLRLLDASTDLPQLQRKNNNPDNCSPFGPSPPAAPQEKG 1063 Query: 182 SDLFDSSGSAFPTFQDKMALPNLTLEDNRRSKFFLPANSVSKSYPDLFPSLSLGTKVDS- 358 SD + SG+ F F +KMA+ NL ++ +F LPA S+ YPD PSLSLGT+V++ Sbjct: 1064 SDYVERSGAGFSDFPEKMAMANLPFDEKLLPRFPLPARSMPNPYPDFLPSLSLGTRVEAA 1123 Query: 359 --TIHHLPTSTMLQDFRLWPQDMPKLDRLVQEVPPTLGLGLMHGTNSSLPENHQKVLDNI 532 ++ L T +L F+ PQD P+ ++ +E PPTLGLG T SS PENH+KVL+NI Sbjct: 1124 NDSVQDLSTMPLLPKFKFPPQDAPRYNQQEREGPPTLGLGQTPATLSSFPENHRKVLENI 1183 Query: 533 MMRTGPGMHNSFKKRPKVNAWSEDELDVLWVGVRRYGRGNWDYMLRDPKLKFSKHRTSEE 712 MMRTG G N FKK+ +V WSEDELD LW+GVRR+GRGNWD MLRDP+LKFSK++T+++ Sbjct: 1184 MMRTGSGSMNLFKKKSRVEGWSEDELDFLWIGVRRHGRGNWDAMLRDPRLKFSKYKTADD 1243 Query: 713 LSVRWEEELVRIFDEAAQPAPKPANLQS------FSGISDAMMTRALHGGRLSGIGADFY 874 LS RWEEE ++I + A P PK + F ISD MM RALHG RL Sbjct: 1244 LSARWEEEQLKILEGPALPMPKSSKSTKGNKSSLFPSISDGMMMRALHGSRLG------- 1296 Query: 875 APLKSQSHLTDMRLGYGHPTSGLLPVDPSDKFNSGNERYVPPPSWRSDQFHSHFRGDFCA 1054 AP+K QSHLTDM+LG+G S L DPS + N+ + P P W SD+F ++F D + Sbjct: 1297 APMKFQSHLTDMKLGFGDLASSLPHFDPSHRLGLQNDHFSPVPHWNSDKFPTNFVRDSSS 1356 Query: 1055 GPSNRPVTSSNSHLEQPFLPNTF--ASLGTMGMHQSNSHDLQQKELVREANKYVKLPFHF 1228 GPS+RP TSSN H+EQPFL N+F +SLG++G+ S+S DL QKE A KY KLP Sbjct: 1357 GPSDRPGTSSNIHMEQPFLLNSFGTSSLGSLGLTSSSSFDLLQKEDELGATKYGKLPSLL 1416 Query: 1229 DKSPNYVHNLHTS----DSISTRSLLDQNKQLYFGHPSVANDATGSESSKKKLPRWLQEA 1396 D+S N + + H + +S S+ + D NK L + S + GS SK KLP WL+EA Sbjct: 1417 DRSLNLLRDSHNNMGAGESTSSGLMPDPNKGLSLSN-SKGKEVEGSSPSKNKLPHWLREA 1475 Query: 1397 VSGXXXXXXXXXXXTVSAIAQSVRLLYGEDKPSIPPF 1507 VS TVSAIAQSVRLLYGE+KP+IPPF Sbjct: 1476 VSAPSKPPDPELPPTVSAIAQSVRLLYGEEKPTIPPF 1512 >ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max] Length = 2325 Score = 405 bits (1040), Expect = e-110 Identities = 260/633 (41%), Positives = 356/633 (56%), Gaps = 13/633 (2%) Frame = +2 Query: 2 LAPGAGTSTNTDIKVHETGGDTQNVMDTPPEFPSNRFKSSILDSVFSYSSFPLMNTQGRG 181 LAP +GTS + +++ E +T+ + D E FK+SI D+ + FP + QG+ Sbjct: 1603 LAPCSGTSVDAEVRSKEVAANTK-LADASTENLQPSFKNSIPDNSLPFVPFP-PSVQGKE 1660 Query: 182 SDLFDSSGSAFPTFQDKMALPNLTLEDNRRSKFFLPANSVSKSYPDLFPSLSLGTKVDS- 358 SD F++SG+ F FQ+KMALPNL ++ ++F L S+ S+ DL PSLS+G +++S Sbjct: 1661 SDAFENSGARFSHFQEKMALPNLPFDERLLARFPLTTKSMPNSHLDLLPSLSIGGRLESL 1720 Query: 359 --TIHHLPTSTMLQDFRLWPQDMPKLDRLVQEVPPTLGLGLMHGTNSSLPENHQKVLDNI 532 ++ LPT +L +F++ P+D+ + ++ ++VPPTLGLG T SS PENH+KVL+NI Sbjct: 1721 NGSMQDLPTMPVLPNFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTFSSFPENHRKVLENI 1780 Query: 533 MMRTGPGMHNSFKKRPKVNAWSEDELDVLWVGVRRYGRGNWDYMLRDPKLKFSKHRTSEE 712 MMRTG G N KK+ + + WSEDELD LW+GVRR+GRGNWD MLRDPKLKFSK++TSE+ Sbjct: 1781 MMRTGSGSSNLLKKKSRSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSED 1840 Query: 713 LSVRWEEELVRIFDEAAQPAPK-----PANLQSFSGISDAMMTRALHGGRLSGIGADFYA 877 LSVRWEEE V++F PA + + + ISD MM RALHG + F Sbjct: 1841 LSVRWEEEQVKVFQGPPFPAQRSFKTTKSTKSAHFPISDGMMERALHGSK-------FLL 1893 Query: 878 PLKSQSHLTDMRLGYGHPTSGLLPVDPSDKFNSGNERYVPPPSWRSDQFHSHFRGDFCAG 1057 P K Q+HLTDM+LG G S L D+ + N+ ++P PSW D+ S F A Sbjct: 1894 PPKFQNHLTDMKLGIGDSASSLSHFSTLDRPSLQNDHFIPLPSWSYDKNRSKFPEGAPAE 1953 Query: 1058 PSNRPVTSSNSHLEQPFLPNTF--ASLGTMGMHQSNSHDLQQKELVREANKYVKLPFHFD 1231 ++RP TSS+ E+PFL N+F ++LG++G++ S S D QKE + +K KLP FD Sbjct: 1954 TTDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGSIDAHQKEDGQGNSKRGKLPVLFD 2013 Query: 1232 KSPNYVHN--LHTSDSISTRSLLDQNKQLYFGHPSVANDATGSESSKKKLPRWLQEAVSG 1405 S N V + ++ + ST S L N S + GS +SK KLP WL+EAVS Sbjct: 2014 GSSNDVRDNCVNVGNGESTSSGLLSNPSRPDLLHSKGEEVGGSSTSKDKLPHWLREAVSS 2073 Query: 1406 XXXXXXXXXXXTVSAIAQSVRLLYGEDKPSIPPFRVXXXXXXXXXXXXXXXXXXXXXXXX 1585 TVSAIAQSVRLLYGEDKP+IPPF + Sbjct: 2074 PAKLPDPELPPTVSAIAQSVRLLYGEDKPTIPPFVIPGPP-------------------- 2113 Query: 1586 XXXSADIATTSKNFEKSLLGDSLASGSTLXRGSADIATTSKNFEKSLLGDSLASGSTLLA 1765 + K+ S+ RG D A S++ +S D+ AS S L Sbjct: 2114 -------PSLPKDPRCSVKKKKKRRSHKFSRGLPDFAGNSRDLHRSHHVDNGASSSLPLG 2166 Query: 1766 PSLP-SSMARPLGFPWIEAPKNLPSLNLNMTTS 1861 PSLP S LG IE+ NLP LNL + +S Sbjct: 2167 PSLPLLSHTGALGTQQIESDLNLPPLNLKVASS 2199 >ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2332 Score = 402 bits (1033), Expect = e-109 Identities = 259/644 (40%), Positives = 361/644 (56%), Gaps = 16/644 (2%) Frame = +2 Query: 2 LAPGAGTSTNTDIKVHETGGDTQNVMDTPPEFPSNRFKSSILDSVFSYSSFPLMNTQGRG 181 L P + TS DIK E D ++D E R K++ D S+S P ++ QG+ Sbjct: 1612 LPPCSETSIEMDIKHQEPASDKPKLLDASAEILQPRLKNNFADGWHSFSPCPPIS-QGKD 1670 Query: 182 SDLFDSSGSAFPTFQDKMALPNLTLEDNRRSKFFLPANSVSKSYPDLFPSLSLGTK---V 352 SD + S S+F FQ+KM+LPN ++N S+F LP+ S+ ++ DL PSLSLG + V Sbjct: 1671 SDHLEGSSSSFAGFQEKMSLPNFPFDENLLSRFPLPSKSMPSNH-DLLPSLSLGRRLEAV 1729 Query: 353 DSTIHHLPTSTMLQDFRLWPQDMPKLDRLVQEVPPTLGLGLMHGTNSSLPENHQKVLDNI 532 + + LP +L + + PQD + ++L +EVPPTLGLG M SS PENH+KVL+NI Sbjct: 1730 NDSTRDLPAMPLLPNLKFPPQDATRYNQLEREVPPTLGLGQMPSAFSSFPENHRKVLENI 1789 Query: 533 MMRTGPGMHNSFKKRPKVNAWSEDELDVLWVGVRRYGRGNWDYMLRDPKLKFSKHRTSEE 712 MMRTG G + ++K+ K++ WSEDELD LWVGVRRYGRGNWD +LRDP+LKFSK++TSE+ Sbjct: 1790 MMRTGSGSSSLYRKKSKIDVWSEDELDFLWVGVRRYGRGNWDAILRDPRLKFSKYKTSED 1849 Query: 713 LSVRWEEELVRIFDEAAQPAP------KPANLQSFSGISDAMMTRALHGGRLSGIGADFY 874 L+ RWEEE + D +A P P K + F I + MMTRALHG RL Sbjct: 1850 LAARWEEEQFKFLDGSAFPLPKMMKPTKSSKSSLFPSIPEGMMTRALHGSRL-------V 1902 Query: 875 APLKSQSHLTDMRLGYGHPTSGLLPVDPSDKFNSGNERYVPPPSWRSDQFHSHFRGDFCA 1054 P K QSHLTDM+LG+G +S L ++P D+F+ NE + P P+W SD+ F GD Sbjct: 1903 TPSKFQSHLTDMKLGFGDLSSSLPHLEPLDQFSLQNEHFGPIPTWNSDELRVSFVGDSSM 1962 Query: 1055 GPSNRPVTSSNSHLEQPFLPNTF--ASLGTMGMHQSNSHDLQQKELVREANKYVKLPFHF 1228 GPS+ V+S E+PFL N+F ++L T+G++ S++ DLQ++E KY K P Sbjct: 1963 GPSH--VSS-----EKPFLLNSFGASTLATLGLNSSSNFDLQRREEEYNTMKYGKSPSLL 2015 Query: 1229 DKSPNYVHNLHT---SDSISTRSL-LDQNKQLYFGHPSVANDATGSESSKKKLPRWLQEA 1396 D+S + +H+ H S +S+ +L LD NK L H S + GS SS KLP WL+EA Sbjct: 2016 DRSLHILHDSHNNVGSGELSSSALFLDPNKVLNPFH-SKGKEVVGS-SSSNKLPHWLREA 2073 Query: 1397 VSG-XXXXXXXXXXXTVSAIAQSVRLLYGEDKPSIPPFRVXXXXXXXXXXXXXXXXXXXX 1573 VS TVSAIAQSVR+LYGE++P+IPPF V Sbjct: 2074 VSAPPVKPAIPDLPPTVSAIAQSVRVLYGENQPTIPPFIVPGPP---------------- 2117 Query: 1574 XXXXXXXSADIATTSKNFEKSLLGDSLASGSTLXRGSADIATTSKNFEKSLLGDSLASGS 1753 + K+ + L + DI +S++F S+ G ++AS S Sbjct: 2118 -----------PSQPKDPRRILRKKKKRRSHMFRQFPLDIGGSSQDFRNSIHGSNVASTS 2166 Query: 1754 TLLAPSLPSSMARPLGFPWIEAPKNLPSLNLNMTTSQPLSSFVN 1885 P +P + G PW E+ NLP +L+ S S+++N Sbjct: 2167 ---IPQVPPLVHETSG-PWNESDFNLPLPSLHKMNSLTSSAYLN 2206 >ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2327 Score = 394 bits (1013), Expect = e-107 Identities = 250/648 (38%), Positives = 356/648 (54%), Gaps = 20/648 (3%) Frame = +2 Query: 2 LAPGAGTSTNTDIKVHETGGDTQNVMDTPPEFPSNRFKSSILDSVFSYSSFPLMNTQGRG 181 L P +GTS TD+K ET D ++D E R K+++ D +S P + G+ Sbjct: 1612 LPPCSGTSIETDVKHQETTSDKPKLLDASAEVLQQRLKNNLSDGWHPFSPCPPPISHGKD 1671 Query: 182 SDLFDSSGSAFPTFQDKMALPNLTLEDNRRSKFFLPANSVSKSYPDLFPSLSLGTK---V 352 SD + S S+F FQ+KM+LPNL ++ +F LP+ S+ ++ DL PSLSLG + V Sbjct: 1672 SDRLEGSSSSFAGFQEKMSLPNLPFDEKLLPRFPLPSKSIPSTHHDLLPSLSLGRRLEAV 1731 Query: 353 DSTIHHLPTSTMLQDFRLWPQDMPKLDRLVQEVPPTLGLGLMHGTNSSLPENHQKVLDNI 532 + ++ LP +L + + PQD + ++L +EVPPTLGLG M + S PENH+KVL+NI Sbjct: 1732 NDSMRDLPAMPLLPNLKFHPQDAIRYNQLEKEVPPTLGLGQMPSSFPSFPENHRKVLENI 1791 Query: 533 MMRTGPGMHNSFKKRPKVNAWSEDELDVLWVGVRRYGRGNWDYMLRDPKLKFSKHRTSEE 712 +MRTG G + + K+ KV+ WSEDELD LWVGVRRYGRGNWD MLRDP+LKFSK++TSE+ Sbjct: 1792 IMRTGSGSSSLYSKKSKVDVWSEDELDFLWVGVRRYGRGNWDAMLRDPRLKFSKYKTSED 1851 Query: 713 LSVRWEEELVRIFDEAAQP------APKPANLQSFSGISDAMMTRALHGGRLSGIGADFY 874 L+VRWEEE ++ D +A P A K + F I + MMTRALHG R Sbjct: 1852 LAVRWEEEQLKFLDGSAFPLLKTLKATKSSKSSLFPSIPEGMMTRALHGSR--------- 1902 Query: 875 APLKSQSHLTDMRLGYGHPTSGLLPVDPSDKFNSGNERYVPPPSWRSDQFHSHFRGDFCA 1054 P K QSHLTDM+LG+G +S L +P D+ + NE + P P+W D+ ++F GD A Sbjct: 1903 -PSKFQSHLTDMKLGFGDLSSSLPHFEPLDQLSLRNEHFSPIPTWNPDELQANFVGDSSA 1961 Query: 1055 GPSNRPVTSSNSHLEQPFLPNTF--ASLGTMGMHQSNSHDLQQKELVREANKYVKLPFHF 1228 GPS V+S E+PFL ++F ++L T+G++ S S DLQ++E E KY KLP Sbjct: 1962 GPSLH-VSS-----EKPFLLSSFGASNLATLGLNSSTSFDLQRREEEYETMKYGKLPSLL 2015 Query: 1229 DKSPNYVHNLHTS-DSISTRSLLDQNKQLYFGHP--------SVANDATGSESSKKKLPR 1381 DKS +H S DS + + + + F HP S + GS SS KLP Sbjct: 2016 DKS------VHISRDSQNNVGIGELSNSGLFLHPSKFLNPINSKGKEVVGS-SSSNKLPH 2068 Query: 1382 WLQEAVSGXXXXXXXXXXXTVSAIAQSVRLLYGEDKPSIPPFRVXXXXXXXXXXXXXXXX 1561 WL+EAV+ TVSAIAQSVR+LYGE++P+IPPF + Sbjct: 2069 WLREAVTAPVKPPEPELPPTVSAIAQSVRVLYGENQPTIPPFVIPGPP------------ 2116 Query: 1562 XXXXXXXXXXXSADIATTSKNFEKSLLGDSLASGSTLXRGSADIATTSKNFEKSLLGDSL 1741 + K+ L + D ++++F + G ++ Sbjct: 2117 ---------------PSQPKDPRWILRKKKKRRSHMFRQFPLDTGGSTQDFRYGIHGCNV 2161 Query: 1742 ASGSTLLAPSLPSSMARPLGFPWIEAPKNLPSLNLNMTTSQPLSSFVN 1885 AS +++ P +P + R PW E+ NLP +L+ S S+++N Sbjct: 2162 AS-TSIPPPLVPETSGR----PWNESDLNLPLPSLSKMNSLTSSAYLN 2204