BLASTX nr result

ID: Coptis23_contig00004822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004822
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284752.1| PREDICTED: electron transfer flavoprotein su...   262   2e-68
gb|AFK40464.1| unknown [Medicago truncatula]                          258   5e-67
ref|XP_004134069.1| PREDICTED: electron transfer flavoprotein su...   251   4e-65
gb|ABK96546.1| unknown [Populus trichocarpa x Populus deltoides]      250   7e-65
gb|AFK36032.1| unknown [Lotus japonicus]                              248   3e-64

>ref|XP_002284752.1| PREDICTED: electron transfer flavoprotein subunit beta,
           mitochondrial [Vitis vinifera]
           gi|296083620|emb|CBI23609.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  262 bits (670), Expect = 2e-68
 Identities = 134/152 (88%), Positives = 142/152 (93%)
 Frame = -1

Query: 457 MKIMVAVKRVIDYAVKIRVKSDKTGVETSNIKMSMNPFCEIGLEEALRIKEAGLASEVIA 278
           MKIMVA+KRV+DYAVKIRVKSDK+GVETSN+KMSMNPFCEIGLEEALRIKE+GLASEVIA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKSDKSGVETSNVKMSMNPFCEIGLEEALRIKESGLASEVIA 60

Query: 277 VSMGSGQCVDTLRTGLAMGADRAIHVDTKDVMLYPLYVAKLLKKLVDLEKPGLLILGKQA 98
           VS+G  QCVDTLRTGLAMGADRAIHV+     LYPL VAKLLK LVD+EKPGLLILGKQA
Sbjct: 61  VSVGPSQCVDTLRTGLAMGADRAIHVEA-SATLYPLSVAKLLKALVDVEKPGLLILGKQA 119

Query: 97  IDDDCNQTGQMVAGLLKWPQGTFASKVVLDKE 2
           IDDDCNQTGQMVAGLL WPQGTFASKVVLDKE
Sbjct: 120 IDDDCNQTGQMVAGLLNWPQGTFASKVVLDKE 151


>gb|AFK40464.1| unknown [Medicago truncatula]
          Length = 251

 Score =  258 bits (658), Expect = 5e-67
 Identities = 130/152 (85%), Positives = 139/152 (91%)
 Frame = -1

Query: 457 MKIMVAVKRVIDYAVKIRVKSDKTGVETSNIKMSMNPFCEIGLEEALRIKEAGLASEVIA 278
           MKIMV VKRVIDYAVKIRVK DKTGV T N+KMSMNPFCEI LEEALRI+E+GLASEV+A
Sbjct: 1   MKIMVTVKRVIDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60

Query: 277 VSMGSGQCVDTLRTGLAMGADRAIHVDTKDVMLYPLYVAKLLKKLVDLEKPGLLILGKQA 98
           VSMG  QCVDTLRTGLAMGADR IHV+  D M YPL+VAK+LKKLV++EKPGLLILGKQA
Sbjct: 61  VSMGPSQCVDTLRTGLAMGADRGIHVEANDSM-YPLFVAKILKKLVEIEKPGLLILGKQA 119

Query: 97  IDDDCNQTGQMVAGLLKWPQGTFASKVVLDKE 2
           IDDDCNQTGQMVAGLL WPQGTFASKVVLDKE
Sbjct: 120 IDDDCNQTGQMVAGLLNWPQGTFASKVVLDKE 151


>ref|XP_004134069.1| PREDICTED: electron transfer flavoprotein subunit beta,
           mitochondrial-like [Cucumis sativus]
           gi|449525930|ref|XP_004169969.1| PREDICTED: electron
           transfer flavoprotein subunit beta, mitochondrial-like
           [Cucumis sativus]
          Length = 251

 Score =  251 bits (641), Expect = 4e-65
 Identities = 126/152 (82%), Positives = 138/152 (90%)
 Frame = -1

Query: 457 MKIMVAVKRVIDYAVKIRVKSDKTGVETSNIKMSMNPFCEIGLEEALRIKEAGLASEVIA 278
           MKIMVA+KRV+DYAVKIRVK D+TGVET N+KMSMNPFCEI +EEALRIKEAGLASEV+A
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 277 VSMGSGQCVDTLRTGLAMGADRAIHVDTKDVMLYPLYVAKLLKKLVDLEKPGLLILGKQA 98
           VSMG  QCVDTLRTGLAMGADR IHV+     LYPL VAK+LK LV++EKPGLL+LGKQA
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEA-TAPLYPLSVAKILKALVEVEKPGLLLLGKQA 119

Query: 97  IDDDCNQTGQMVAGLLKWPQGTFASKVVLDKE 2
           IDDDCNQTGQMVAGLL WPQGTFASKVV+DKE
Sbjct: 120 IDDDCNQTGQMVAGLLNWPQGTFASKVVIDKE 151


>gb|ABK96546.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 251

 Score =  250 bits (639), Expect = 7e-65
 Identities = 126/152 (82%), Positives = 140/152 (92%)
 Frame = -1

Query: 457 MKIMVAVKRVIDYAVKIRVKSDKTGVETSNIKMSMNPFCEIGLEEALRIKEAGLASEVIA 278
           MKIMVA+KRV+DYAVKIRVKSDK+GVET N+KMSMNPFCEI LEEALRIK++GLASEV+A
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKSDKSGVETQNVKMSMNPFCEIALEEALRIKQSGLASEVVA 60

Query: 277 VSMGSGQCVDTLRTGLAMGADRAIHVDTKDVMLYPLYVAKLLKKLVDLEKPGLLILGKQA 98
           VSMGS QCVDTLRTGLAMGADR IHV++    L+PL VAKLLK LV++EKPGL+ILGKQA
Sbjct: 61  VSMGSTQCVDTLRTGLAMGADRGIHVES-SAALFPLTVAKLLKALVEVEKPGLIILGKQA 119

Query: 97  IDDDCNQTGQMVAGLLKWPQGTFASKVVLDKE 2
           IDDDCNQTGQMVAGLL WPQGTFASKV+LD E
Sbjct: 120 IDDDCNQTGQMVAGLLGWPQGTFASKVLLDTE 151


>gb|AFK36032.1| unknown [Lotus japonicus]
          Length = 251

 Score =  248 bits (634), Expect = 3e-64
 Identities = 126/152 (82%), Positives = 136/152 (89%)
 Frame = -1

Query: 457 MKIMVAVKRVIDYAVKIRVKSDKTGVETSNIKMSMNPFCEIGLEEALRIKEAGLASEVIA 278
           MKIMVA+KRV+DYAVKIRVK DKTGV T N+KMSMNPFCEI LEEALRI+E+GLASEV+A
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60

Query: 277 VSMGSGQCVDTLRTGLAMGADRAIHVDTKDVMLYPLYVAKLLKKLVDLEKPGLLILGKQA 98
           VSMG  Q VDTLRTGLAMGADR IHV+     LYPL VAK+LKKLV++EKPGLLILGKQA
Sbjct: 61  VSMGPAQSVDTLRTGLAMGADRGIHVEANG-SLYPLSVAKILKKLVEIEKPGLLILGKQA 119

Query: 97  IDDDCNQTGQMVAGLLKWPQGTFASKVVLDKE 2
           IDDDCNQTGQM AGLL WPQGTFASKVVLDKE
Sbjct: 120 IDDDCNQTGQMTAGLLNWPQGTFASKVVLDKE 151


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