BLASTX nr result
ID: Coptis23_contig00004805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004805
(1898 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300588.1| actin related protein [Populus trichocarpa] ... 435 e-159
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi... 422 e-157
ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cuc... 427 e-156
ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-relate... 424 e-155
ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Gly... 408 e-150
>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
gi|222847846|gb|EEE85393.1| actin related protein
[Populus trichocarpa]
Length = 473
Score = 435 bits (1119), Expect(2) = e-159
Identities = 226/348 (64%), Positives = 271/348 (77%)
Frame = -3
Query: 1764 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1585
MAMLL+KV ESV++ + F + + V S LG DR+P DV +QI++
Sbjct: 1 MAMLLKKVWESVSNRATSFSSSSID--SVTTPLSYTESSSSLGA-FDRLPIDVVLQIVRL 57
Query: 1584 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNPPEPQHWDALVFAEKHLRSGYPLFQTF 1405
VGPK+AAR S+VCKSW+ L+SDNRLWI+FLQN WD++ F E HLRSGYP+ QTF
Sbjct: 58 VGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT---WDSVFFVETHLRSGYPI-QTF 113
Query: 1404 YNQSIQLSFMQIYGQRVHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1225
+ +LSFM+IYGQRV + G+V++D A PSGRSATFLEFGNIESPMY
Sbjct: 114 SSPITELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNACPSGRSATFLEFGNIESPMY 173
Query: 1224 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1045
SRL+HFFATIYSRMQVK S +P VVS+P+CHYDDTESA+A+RRQLK+ IY+ LFDMNVPA
Sbjct: 174 SRLQHFFATIYSRMQVKASAHPIVVSLPLCHYDDTESARASRRQLKDAIYTALFDMNVPA 233
Query: 1044 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 865
VCAINQATLAL+AA+R SGIVVNIGF VTSVVPIL GK+MR VGVEV+G GA+K+TG+LR
Sbjct: 234 VCAINQATLALYAAQRTSGIVVNIGFQVTSVVPILHGKIMRTVGVEVMGVGALKVTGFLR 293
Query: 864 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEG 721
E MQ+NN+NF+SL+TV LKENLCYVA DYEAE+ KDTQASFEV GEG
Sbjct: 294 EQMQQNNLNFESLHTVHTLKENLCYVAADYEAELYKDTQASFEVPGEG 341
Score = 155 bits (393), Expect(2) = e-159
Identities = 73/109 (66%), Positives = 86/109 (78%)
Frame = -1
Query: 638 MALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEKELRTFLTPSMSEG 459
M L QAVALCM HC A+E+T DD WFKT+VL+GG+ACLPGL ERLEKEL L PS+S G
Sbjct: 367 MGLQQAVALCMDHCHAAELTEDDAWFKTIVLSGGTACLPGLAERLEKELHGLLPPSISNG 426
Query: 458 IRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFITSW 312
IRVI P YGA+SAW GAK+I N+STF SWC+T+ QFR+KSR F +W
Sbjct: 427 IRVISPSYGADSAWIGAKLIGNLSTFPGSWCVTKKQFRRKSR--FTLAW 473
>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
gi|296090034|emb|CBI39853.3| unnamed protein product
[Vitis vinifera]
Length = 473
Score = 422 bits (1085), Expect(2) = e-157
Identities = 221/348 (63%), Positives = 265/348 (76%)
Frame = -3
Query: 1764 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1585
MA LLRKV ESV+ SS + +E+ RR VV SS G IP DVFM IL+
Sbjct: 1 MAALLRKVWESVSRSS-KATSESSDRR--VVVQSST-------GAFSHIPFDVFMHILQF 50
Query: 1584 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNPPEPQHWDALVFAEKHLRSGYPLFQTF 1405
+ P+E A+ SLVCK W+FL+SDN+LW++ LQ +P WD+LVFAE HL+ GYPL TF
Sbjct: 51 LEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLL-TF 109
Query: 1404 YNQSIQLSFMQIYGQRVHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1225
+Q QLSFM I+G+R G+++ID Y +G SATFLEFGNIE+P+Y
Sbjct: 110 NDQMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIY 169
Query: 1224 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1045
SRLRHF ATIYSRM VKPS P V+S+PICHYDD ESAKA+RRQLKETI+SVLFDMNVPA
Sbjct: 170 SRLRHFLATIYSRMHVKPSAQPIVLSVPICHYDDNESAKASRRQLKETIHSVLFDMNVPA 229
Query: 1044 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 865
VCAINQATLAL+AA++ SGIVVNIGFH TS+VPIL GKVMR+VGVEV+G G +KLTG+LR
Sbjct: 230 VCAINQATLALYAAKQTSGIVVNIGFHCTSIVPILHGKVMRKVGVEVVGMGGLKLTGFLR 289
Query: 864 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEG 721
E MQ+ N+NF+SLYTVR+LKENLCYVA DYEAE+ KDT+ASF+V EG
Sbjct: 290 ERMQQQNMNFESLYTVRSLKENLCYVAADYEAELSKDTRASFQVASEG 337
Score = 160 bits (405), Expect(2) = e-157
Identities = 73/108 (67%), Positives = 87/108 (80%)
Frame = -1
Query: 638 MALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEKELRTFLTPSMSEG 459
M LHQAVA CM HCQ++ +T D+ WFKTVVLAGGSACLPGL ERLEKEL + PS++ G
Sbjct: 363 MGLHQAVAHCMDHCQSAAITADESWFKTVVLAGGSACLPGLAERLEKELHGLVCPSVANG 422
Query: 458 IRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFITS 315
IRV+PP YG +SAWFGAKIISN+STF SWCMT+ QFR K RR+ + +
Sbjct: 423 IRVLPPPYGEKSAWFGAKIISNLSTFPGSWCMTKKQFRPKVRRNLMVT 470
>ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cucumis sativus]
Length = 466
Score = 427 bits (1097), Expect(2) = e-156
Identities = 228/350 (65%), Positives = 268/350 (76%), Gaps = 2/350 (0%)
Frame = -3
Query: 1764 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLG-GTLDRIPADVFMQILK 1588
MAMLLRKV SV++ S R EN S GFE G DRIP ++ MQIL+
Sbjct: 1 MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48
Query: 1587 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNPPEPQHWDALVFAEKHLRSGYPLFQ 1411
GPK A+ ++CKSW+ L+S DN LWIFFLQN + + WD+++F E L SGYPL +
Sbjct: 49 LAGPKTTAKMGMLCKSWRSLVSSDNTLWIFFLQN---QLEPWDSVLFGETKLASGYPL-E 104
Query: 1410 TFYNQSIQLSFMQIYGQRVHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1231
TF Q + LSFM++Y +R + GSV+ID Y PSGRSATFLEFGNIESP
Sbjct: 105 TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164
Query: 1230 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1051
MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165 MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224
Query: 1050 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 871
P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225 PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284
Query: 870 LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEG 721
LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E GEG
Sbjct: 285 LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEG 334
Score = 154 bits (388), Expect(2) = e-156
Identities = 69/106 (65%), Positives = 86/106 (81%)
Frame = -1
Query: 638 MALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEKELRTFLTPSMSEG 459
M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL+KEL L +S G
Sbjct: 360 MGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNG 419
Query: 458 IRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFI 321
IRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+ + I
Sbjct: 420 IRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLI 465
>ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-related protein 8-like [Cucumis
sativus]
Length = 466
Score = 424 bits (1090), Expect(2) = e-155
Identities = 227/350 (64%), Positives = 267/350 (76%), Gaps = 2/350 (0%)
Frame = -3
Query: 1764 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLG-GTLDRIPADVFMQILK 1588
MAMLLRKV SV++ S R EN S GFE G DRIP ++ MQIL+
Sbjct: 1 MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48
Query: 1587 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNPPEPQHWDALVFAEKHLRSGYPLFQ 1411
GPK A+ ++CKSW+ L+S DN LWI FLQN + + WD+++F E L SGYPL +
Sbjct: 49 LAGPKTTAKMGMLCKSWRSLVSSDNTLWIXFLQN---QLEPWDSVLFGETKLASGYPL-E 104
Query: 1410 TFYNQSIQLSFMQIYGQRVHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1231
TF Q + LSFM++Y +R + GSV+ID Y PSGRSATFLEFGNIESP
Sbjct: 105 TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164
Query: 1230 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1051
MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165 MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224
Query: 1050 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 871
P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225 PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284
Query: 870 LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEG 721
LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E GEG
Sbjct: 285 LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEG 334
Score = 154 bits (388), Expect(2) = e-155
Identities = 69/106 (65%), Positives = 86/106 (81%)
Frame = -1
Query: 638 MALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEKELRTFLTPSMSEG 459
M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL+KEL L +S G
Sbjct: 360 MGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERLQKELYGLLPSPLSNG 419
Query: 458 IRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFI 321
IRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+ + I
Sbjct: 420 IRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNLI 465
>ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Glycine max]
Length = 477
Score = 408 bits (1048), Expect(2) = e-150
Identities = 218/348 (62%), Positives = 259/348 (74%)
Frame = -3
Query: 1764 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSSERGFEGLGGTLDRIPADVFMQILKS 1585
M+MLLRKV E V S + + E +G L+ +P+D+ M IL+
Sbjct: 1 MSMLLRKVWERVLWRSDSSTSASASASSSSSSSPPEVACSDMG-ELELLPSDILMHILRL 59
Query: 1584 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNPPEPQHWDALVFAEKHLRSGYPLFQTF 1405
+GPKEAA+ S+VCK+ + L+SDNRLWI FLQ + EP D++ FAE L GYPL F
Sbjct: 60 LGPKEAAKLSVVCKALRSLVSDNRLWIHFLQTHQAEPSG-DSVFFAETTLSYGYPL-PPF 117
Query: 1404 YNQSIQLSFMQIYGQRVHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1225
QLSF IYGQR + GS++ID YA PSGRSATFLEFGNIESPMY
Sbjct: 118 AGHWPQLSFKHIYGQRALVPGSIIIDGGSGYCKFGWSKYAYPSGRSATFLEFGNIESPMY 177
Query: 1224 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1045
+RLRHFFATIY+RMQVKP+K P +VS+PICHYDDTESAKA+R+QLKE IY+ LFDMNVPA
Sbjct: 178 TRLRHFFATIYNRMQVKPNKQPVIVSVPICHYDDTESAKASRQQLKEAIYASLFDMNVPA 237
Query: 1044 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 865
VCAINQATLAL+AA+R SGIVVNIGF VTS+VPIL GKVMR+VGVEV+G GA+KLTG+LR
Sbjct: 238 VCAINQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLR 297
Query: 864 ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEG 721
E MQ NN++F SLYTVR LKENLCYVA+DYEAE+ KDT+ASFE GEG
Sbjct: 298 EKMQLNNLSFQSLYTVRTLKENLCYVALDYEAELLKDTKASFEAAGEG 345
Score = 152 bits (383), Expect(2) = e-150
Identities = 64/106 (60%), Positives = 83/106 (78%)
Frame = -1
Query: 638 MALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEKELRTFLTPSMSEG 459
M LHQA+ALC+ HC ++++ CD W+KT+VL+GG+ACLPGL ER+EKEL L P +S G
Sbjct: 371 MGLHQAIALCVEHCHSADLACDSDWYKTIVLSGGTACLPGLAERIEKELHALLPPYVSNG 430
Query: 458 IRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRSFI 321
IRVIPP YGA++ WFGAKI+ N+STF WC+T+ QFRQK R + I
Sbjct: 431 IRVIPPPYGADTPWFGAKIVGNLSTFPGHWCVTKKQFRQKPRLNLI 476