BLASTX nr result
ID: Coptis23_contig00004797
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004797
(1114 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 605 e-171
ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|2... 604 e-170
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat... 600 e-169
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat... 599 e-169
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2... 599 e-169
>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
product [Vitis vinifera]
Length = 1115
Score = 605 bits (1560), Expect = e-171
Identities = 295/374 (78%), Positives = 324/374 (86%), Gaps = 3/374 (0%)
Frame = +1
Query: 1 AENSVATEELTKSFGWDTDDSSMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHM 180
++ SVAT+ELTKSFGWDT DS MQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM
Sbjct: 253 SDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 312
Query: 181 SCIQCMNVDHSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYHAGQHGLQDA 360
+ I+C+NVD+ S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKYHA HGLQDA
Sbjct: 313 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEIHGLQDA 372
Query: 361 RKGVLFLDFPPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRV 540
RKGVLF+DFPPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP+ADR V
Sbjct: 373 RKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSV 432
Query: 541 RNLYVLHSVLVHSGGEHGGRYYAFIRTTLSDQWLRFDDAWVTKEDMKRAVEEQYGGEEEL 720
RNLY LHSVLVHSGG HGG YYA+IR TLSDQW +FDD VTKED+KRA+EEQYGGEEEL
Sbjct: 433 RNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEEL 492
Query: 721 TQTNPGFSSTPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRLXXXXXXXXX 900
QTNPGF+++PF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 493 PQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRLKKEQEEKEQ 552
Query: 901 XXXXDQPC---TIIKVARNEDLVEQIGRDIYFDLVDHDKVHSFCVQKHISFIVFKEEVAK 1071
TIIKVARNEDL+EQIGRDIYFDLVDHDKV SF +QK F +FKEEVAK
Sbjct: 553 KRKEKAEAHLYTIIKVARNEDLIEQIGRDIYFDLVDHDKVRSFRIQKQTPFNLFKEEVAK 612
Query: 1072 KFGIPVQFQRLWLW 1113
+FGIPVQFQR WLW
Sbjct: 613 EFGIPVQFQRFWLW 626
>ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|222850785|gb|EEE88332.1|
predicted protein [Populus trichocarpa]
Length = 1131
Score = 604 bits (1557), Expect = e-170
Identities = 293/374 (78%), Positives = 325/374 (86%), Gaps = 3/374 (0%)
Frame = +1
Query: 1 AENSVATEELTKSFGWDTDDSSMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHM 180
++ SVAT+ELTKSFGWDT DS MQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM
Sbjct: 254 SDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 313
Query: 181 SCIQCMNVDHSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYHAGQHGLQDA 360
+ I+C+NVD+ S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKYHA QHGLQDA
Sbjct: 314 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDA 373
Query: 361 RKGVLFLDFPPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRV 540
RKGVLF+DFPPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP ADR V
Sbjct: 374 RKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSV 433
Query: 541 RNLYVLHSVLVHSGGEHGGRYYAFIRTTLSDQWLRFDDAWVTKEDMKRAVEEQYGGEEEL 720
RNLY LHSVLVHSGG HGG YYA+IR TLSDQW +FDD VTKED+KRA+EEQYGGEEEL
Sbjct: 434 RNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEEL 493
Query: 721 TQTNPGFSSTPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRLXXXXXXXXX 900
QTNPGF+++PF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 494 PQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRLKKEQEEKEQ 553
Query: 901 XXXXDQPC---TIIKVARNEDLVEQIGRDIYFDLVDHDKVHSFCVQKHISFIVFKEEVAK 1071
TIIKVAR+EDL+EQIG+D+YFDLVDHDKV SF +QK I+F +FKEEVAK
Sbjct: 554 KRKEKAEAHLYTIIKVARSEDLLEQIGKDVYFDLVDHDKVRSFRIQKQITFNLFKEEVAK 613
Query: 1072 KFGIPVQFQRLWLW 1113
+FGIPVQ QR WLW
Sbjct: 614 EFGIPVQLQRFWLW 627
>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 1120
Score = 600 bits (1546), Expect = e-169
Identities = 292/373 (78%), Positives = 320/373 (85%), Gaps = 3/373 (0%)
Frame = +1
Query: 4 ENSVATEELTKSFGWDTDDSSMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMS 183
+ SVAT+ELTKSFGWDT DS MQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+
Sbjct: 254 DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMN 313
Query: 184 CIQCMNVDHSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYHAGQHGLQDAR 363
I+C+NVD+ S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKYHA +HGLQDA+
Sbjct: 314 YIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAK 373
Query: 364 KGVLFLDFPPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVR 543
KGVLF+DFPPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP ADR VR
Sbjct: 374 KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVR 433
Query: 544 NLYVLHSVLVHSGGEHGGRYYAFIRTTLSDQWLRFDDAWVTKEDMKRAVEEQYGGEEELT 723
NLY LHSVLVHSGG HGG YYAFIR TLSDQW +FDD VTKEDMKRA+EEQYGGEEEL
Sbjct: 434 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMKRALEEQYGGEEELQ 493
Query: 724 QTNPGFSSTPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRLXXXXXXXXXX 903
QTNPGF++ PF+FTKYSNAYMLVYIR++DK++I CNVDE+DI+EHLR+RL
Sbjct: 494 QTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDK 553
Query: 904 XXXDQPC---TIIKVARNEDLVEQIGRDIYFDLVDHDKVHSFCVQKHISFIVFKEEVAKK 1074
TIIKVAR+EDL EQIGRDIYFDLVDHDKV +F +QK F FKEEVAK+
Sbjct: 554 RRYKAQAHLYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQKQTPFNFFKEEVAKE 613
Query: 1075 FGIPVQFQRLWLW 1113
FGIPVQFQR W+W
Sbjct: 614 FGIPVQFQRFWIW 626
>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 1109
Score = 599 bits (1545), Expect = e-169
Identities = 291/374 (77%), Positives = 323/374 (86%), Gaps = 3/374 (0%)
Frame = +1
Query: 1 AENSVATEELTKSFGWDTDDSSMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHM 180
++ SVAT+ELTKSFGWDT DS MQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM
Sbjct: 254 SDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 313
Query: 181 SCIQCMNVDHSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYHAGQHGLQDA 360
+ I+C+NVD+ S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKYHA QHGLQDA
Sbjct: 314 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDA 373
Query: 361 RKGVLFLDFPPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRV 540
RKGVLF+DFPPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRE+GKYLSP ADR V
Sbjct: 374 RKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPEADRSV 433
Query: 541 RNLYVLHSVLVHSGGEHGGRYYAFIRTTLSDQWLRFDDAWVTKEDMKRAVEEQYGGEEEL 720
RNLY LHSVLVHSGG HGG YYA+IR TLSDQW +FDD VTKED+KRA+EEQYGGEEEL
Sbjct: 434 RNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEEL 493
Query: 721 TQTNPGFSSTPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRLXXXXXXXXX 900
Q NPGF+++PF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 494 PQANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRLKKEQEEKEQ 553
Query: 901 XXXXDQPC---TIIKVARNEDLVEQIGRDIYFDLVDHDKVHSFCVQKHISFIVFKEEVAK 1071
TIIKVAR+EDL+EQIG+DIYFDLVDHDKV SF +QK + F +FKEEV K
Sbjct: 554 KRKEKAEAHLYTIIKVARSEDLLEQIGKDIYFDLVDHDKVRSFRIQKQMPFNLFKEEVVK 613
Query: 1072 KFGIPVQFQRLWLW 1113
+FGIPVQFQR WLW
Sbjct: 614 EFGIPVQFQRFWLW 627
>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
predicted protein [Populus trichocarpa]
Length = 1116
Score = 599 bits (1544), Expect = e-169
Identities = 291/374 (77%), Positives = 324/374 (86%), Gaps = 3/374 (0%)
Frame = +1
Query: 1 AENSVATEELTKSFGWDTDDSSMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHM 180
++ SVAT+ELTKSFGWDT DS MQHDVQELNRVL EKLEDKMKGT+VEGTIQQLFEGHHM
Sbjct: 254 SDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHM 313
Query: 181 SCIQCMNVDHSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYHAGQHGLQDA 360
+ I+C+NVD+ S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKYHA QHGLQDA
Sbjct: 314 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDA 373
Query: 361 RKGVLFLDFPPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRV 540
RKGVLF+DFPPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP AD V
Sbjct: 374 RKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADCSV 433
Query: 541 RNLYVLHSVLVHSGGEHGGRYYAFIRTTLSDQWLRFDDAWVTKEDMKRAVEEQYGGEEEL 720
RNLY LHSVLVHSGG HGG YYA+IR TLSDQW +FDD VTKED+KRA+EEQYGGEEEL
Sbjct: 434 RNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDVKRALEEQYGGEEEL 493
Query: 721 TQTNPGFSSTPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRLXXXXXXXXX 900
QTNPGF+++PF+FTKYSNAYMLVYIR++DKE++ CNVDE+DI+EHLR+RL
Sbjct: 494 PQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKVICNVDEKDIAEHLRIRLKKEQEEKEQ 553
Query: 901 XXXXDQPC---TIIKVARNEDLVEQIGRDIYFDLVDHDKVHSFCVQKHISFIVFKEEVAK 1071
TIIKVAR+EDL+EQIG+D+YFDLVDHDKV SF +QK I+F +FKEEVAK
Sbjct: 554 KRKEKAEAHLYTIIKVARSEDLLEQIGKDVYFDLVDHDKVRSFRIQKQITFNLFKEEVAK 613
Query: 1072 KFGIPVQFQRLWLW 1113
+FGIPVQFQR WLW
Sbjct: 614 EFGIPVQFQRFWLW 627