BLASTX nr result
ID: Coptis23_contig00004788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004788
(1723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37009.3| unnamed protein product [Vitis vinifera] 594 e-167
ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 591 e-166
ref|XP_002515211.1| conserved hypothetical protein [Ricinus comm... 572 e-160
ref|XP_004158169.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 560 e-157
ref|XP_004135966.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe... 560 e-157
>emb|CBI37009.3| unnamed protein product [Vitis vinifera]
Length = 448
Score = 594 bits (1531), Expect = e-167
Identities = 294/454 (64%), Positives = 353/454 (77%), Gaps = 3/454 (0%)
Frame = +3
Query: 78 RCNFWLPRKNRFCANIAITHSLFCGNHNPNFEQQRVPCPLDPSHSVLKENMEVHIKRCPF 257
RC+FWLP+K RFCAN I S+FCGNHN + + VPCP+DPSHSVL EN+E H+KRCP
Sbjct: 4 RCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKRCPL 63
Query: 258 LKQAETLRLQPYYNKGINGGSEENCSDIQETTSTTISPLMKRNAVYGMSVTEFLGLINKI 437
LKQA++L QP+Y KGIN + ++ TS LMKRNAVY M+V EF LI+KI
Sbjct: 64 LKQAQSLSSQPFYQKGINAAP--TLASLENATS-----LMKRNAVYSMTVPEFSILISKI 116
Query: 438 RLIHGSACLDIRDSFKMPEVCSVWMKREVDGKLPFQEKHVLQQASILGNMDEFGLFSSST 617
+ IH S DIRDS+++PE C +W+KREVD KLPFQEKHV+QQASILGN++EFG+ S+
Sbjct: 117 QSIHSSIRNDIRDSYRVPEACDIWIKREVDRKLPFQEKHVVQQASILGNLEEFGVLEKSS 176
Query: 618 DGVVNRQLEQQQECNG--SLRDGNGVSAVVEFGAGRGYLTQMLADCYGINKVFLVERRSY 791
+Q ++C+ S D NGV AVVEFGAGRGYLTQMLADCYGI +VFLVER+SY
Sbjct: 177 GD------DQMEQCDSDRSSGDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSY 230
Query: 792 KLKADRSLRQKESLILERLRIDIEDLVLSSVESLRGVPYLAVGKHLCGPATDLTLRCCLH 971
KLKADRSLRQKESLILERLRIDIEDL L +VESL+GVPYLA+GKHLCGPATDL+LRCCL
Sbjct: 231 KLKADRSLRQKESLILERLRIDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSLRCCLA 290
Query: 972 AHSSQD-RVLLASDNHLRGLAIATCCHHLCQWKHYINKGYLSELGITKNEFHAITWFTSW 1148
S+QD V S ++LRGLAIATCCHHLCQWKHYINK YL LGITK++FHAITWFTSW
Sbjct: 291 EESNQDDAVQCCSGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSW 350
Query: 1149 AVDADHSSDISDMVDQGFSVDSIEIKDSGEDACKIEGIVRGIPALERAVLGFMCKDIIDI 1328
AVDADH SD+SD+ + SIE K+ ED + IV+ + A+ERAV+GFMCK+IID+
Sbjct: 351 AVDADHGSDLSDVAGCRLHLQSIEKKECVEDVGGVAEIVQNMKAMERAVVGFMCKEIIDM 410
Query: 1329 GRLMWIKKHSLGARLVKYVSSRVSPENHLLVAKY 1430
GRLMW+K+H L +LVKYV +SPENHLL+AK+
Sbjct: 411 GRLMWVKEHGLETQLVKYVPPTISPENHLLIAKH 444
>ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog [Vitis
vinifera]
Length = 465
Score = 591 bits (1523), Expect = e-166
Identities = 296/464 (63%), Positives = 358/464 (77%), Gaps = 13/464 (2%)
Frame = +3
Query: 78 RCNFWLPRKNRFCANIAITHSLFCGNHNPNFEQQRVPCPLDPSHSVLKENMEVHIKRCPF 257
RC+FWLP+K RFCAN I S+FCGNHN + + VPCP+DPSHSVL EN+E H+KRCP
Sbjct: 4 RCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKRCPL 63
Query: 258 LKQAETLRLQPYYNKGINGGSE-ENCSDIQETTSTTISPL------MKRNAVYGMSVTEF 416
LKQA++L QP+Y KGINGG + E+ D + + T++ L MKRNAVY M+V EF
Sbjct: 64 LKQAQSLSSQPFYQKGINGGKDDEDEGDEKGAAAPTLASLENATSLMKRNAVYSMTVPEF 123
Query: 417 LGLINKIRLIHGSACLDIRDSFKMPEVCSVWMKREVDGKLPFQEKHVLQQASILGNMDEF 596
LI+KI+ IH S DIRDS+++PE C +W+KREVD KLPFQEKHV+QQASILGN++EF
Sbjct: 124 SILISKIQSIHSSIRNDIRDSYRVPEACDIWIKREVDRKLPFQEKHVVQQASILGNLEEF 183
Query: 597 GLFSSSTDGVVNRQLEQQQECNG--SLRDGNGVSAVVEFGAGRGYLTQMLADCYGINKVF 770
G+ S+ +Q ++C+ S D NGV AVVEFGAGRGYLTQMLADCYGI +VF
Sbjct: 184 GVLEKSSGD------DQMEQCDSDRSSGDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVF 237
Query: 771 LVERRSYKLKADRSLRQKESLILERLRIDIEDLVLSSVESLRGVPYLAVGKHLCGPATDL 950
LVER+SYKLKADRSLRQKESLILERLRIDIEDL L +VESL+GVPYLA+GKHLCGPATDL
Sbjct: 238 LVERKSYKLKADRSLRQKESLILERLRIDIEDLNLKAVESLQGVPYLAIGKHLCGPATDL 297
Query: 951 TLRCCLHAHSSQ-DRVLLASDNHLRGLAIATCCHHLCQWKHYINKGYLSELGITKNEFHA 1127
+LRCCL S+Q D V S ++LRGLAIATCCHHLCQWKHYINK YL LGITK++FHA
Sbjct: 298 SLRCCLAEESNQDDAVQCCSGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHA 357
Query: 1128 ITWFTSWAVDADHSSDISDMVDQGFSVDSI---EIKDSGEDACKIEGIVRGIPALERAVL 1298
ITWFTSWAVDADH SD+SD+ + S E K+ ED + IV+ + A+ERAV+
Sbjct: 358 ITWFTSWAVDADHGSDLSDVAGIDILILSCCHSEKKECVEDVGGVAEIVQNMKAMERAVV 417
Query: 1299 GFMCKDIIDIGRLMWIKKHSLGARLVKYVSSRVSPENHLLVAKY 1430
GFMCK+IID+GRLMW+K+H L +LVKYV +SPENHLL+AK+
Sbjct: 418 GFMCKEIIDMGRLMWVKEHGLETQLVKYVPPTISPENHLLIAKH 461
>ref|XP_002515211.1| conserved hypothetical protein [Ricinus communis]
gi|223545691|gb|EEF47195.1| conserved hypothetical
protein [Ricinus communis]
Length = 438
Score = 572 bits (1473), Expect = e-160
Identities = 285/452 (63%), Positives = 343/452 (75%), Gaps = 1/452 (0%)
Frame = +3
Query: 78 RCNFWLPRKNRFCANIAITHSLFCGNHNPNFEQQRVPCPLDPSHSVLKENMEVHIKRCPF 257
RC FWLP+KNR CAN ++ S FCGNH Q +PCP+D SHSVLKEN+E HIKRCP
Sbjct: 5 RCKFWLPKKNRSCANTPLSDSPFCGNHTQRCNGQWIPCPIDSSHSVLKENLEGHIKRCPL 64
Query: 258 LKQAETLRLQPYYNKGINGGSEENCSDIQETTSTTISPLMKRNAVYGMSVTEFLGLINKI 437
LKQ ++L LQP+Y KGIN G E++ I+ MKRNAVY M+V+EF LI KI
Sbjct: 65 LKQTQSLSLQPFYQKGINAGKEDD---------DDITSEMKRNAVYSMTVSEFYKLIKKI 115
Query: 438 RLIHGSACLDIRDSFKMPEVCSVWMKREVDGKLPFQEKHVLQQASILGNMDEFGLFSSST 617
IH S C DI +SFK+PE C++W+KRE+D +LPFQEKHV QQA+ILGN+++FG+ S+
Sbjct: 116 ESIHASLCNDILESFKLPEACNMWIKREIDSQLPFQEKHVKQQAAILGNLEDFGVLKSTL 175
Query: 618 DGVVNRQLEQQQECNGSLRDGNGVSAVVEFGAGRGYLTQMLADCYGINKVFLVERRSYKL 797
V C+ + N V AVVEFGAGRGYLTQMLADCYGI +VFLVER+SYKL
Sbjct: 176 GNKV---------CDDD--NANCVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL 224
Query: 798 KADRSLRQKESLILERLRIDIEDLVLSSVESLRGVPYLAVGKHLCGPATDLTLRCCLHAH 977
KADRSLRQKESLILERLRIDIEDL L++VESL+GVPYLA+GKHLCGPATDLTLRCC
Sbjct: 225 KADRSLRQKESLILERLRIDIEDLNLNAVESLQGVPYLAIGKHLCGPATDLTLRCCFSKQ 284
Query: 978 SSQDRVLLASDN-HLRGLAIATCCHHLCQWKHYINKGYLSELGITKNEFHAITWFTSWAV 1154
SS+ + SDN LRGLAIATCCHHLCQWKHYINK +++LGITK EFHAITWFTSWAV
Sbjct: 285 SSEHNMGHCSDNDFLRGLAIATCCHHLCQWKHYINKNLIADLGITKEEFHAITWFTSWAV 344
Query: 1155 DADHSSDISDMVDQGFSVDSIEIKDSGEDACKIEGIVRGIPALERAVLGFMCKDIIDIGR 1334
DADH SD+S +D F + S+E + G DA +E VR + A++RA+LGFMCK IID+GR
Sbjct: 345 DADHGSDLS--IDGRFHLQSMEEEQCGGDADGVEDAVRNMKAVQRAILGFMCKQIIDMGR 402
Query: 1335 LMWIKKHSLGARLVKYVSSRVSPENHLLVAKY 1430
++W K+ L A+LVKYV S VSPENHLL+A++
Sbjct: 403 MIWAKECGLDAKLVKYVPSVVSPENHLLIARH 434
>ref|XP_004158169.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
[Cucumis sativus]
Length = 464
Score = 560 bits (1444), Expect = e-157
Identities = 284/457 (62%), Positives = 337/457 (73%), Gaps = 7/457 (1%)
Frame = +3
Query: 78 RCNFWLPRKNRFCANIAITHSLFCGNHNPNFEQQRVPCPLDPSHSVLKENMEVHIKRCPF 257
RC FWLP+KNRFCA I S FCGNH+ + VPCP+DPSHSVL+EN++ H+KRCP
Sbjct: 4 RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKRCPL 63
Query: 258 LKQAETLRLQPYYNKGINGGSEENCSDI--QETTSTTISPLMKRNAVYGMSVTEFLGLIN 431
LKQ ++L QP+Y KGIN G E++ S S +IS MKRN VYGMS +F L+
Sbjct: 64 LKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLG 123
Query: 432 KIRLIHGSACLDIRDSFKMPEVCSVWMKREVDGKLPFQEKHVLQQASILGNMDEFGLFSS 611
KIR +H C DI+DS+K+ E C++W+K E+D K+PFQEKHVLQQASILGN+DEFG+ S+
Sbjct: 124 KIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSN 183
Query: 612 STDGVVNRQLEQQQECNGSLRDGNGVSAVVEFGAGRGYLTQMLADCYGINKVFLVERRSY 791
G EQ++ D N V AVVEFGAGRGYLTQMLADCYGI +VFLVER+SY
Sbjct: 184 YDGG------EQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSY 237
Query: 792 KLKADRSLRQKESLILERLRIDIEDLVLSSVESLRGVPYLAVGKHLCGPATDLTLRCCL- 968
KLKADRSLRQKESLILERLRIDIEDL L++VESLR PYLA+GKHLCGPATDL LRCCL
Sbjct: 238 KLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLT 297
Query: 969 ----HAHSSQDRVLLASDNHLRGLAIATCCHHLCQWKHYINKGYLSELGITKNEFHAITW 1136
HA + + R + LRGLAIATCCHHLCQW HY NK YL ELGITK EF AITW
Sbjct: 298 KQPNHAVTERCR----DKSKLRGLAIATCCHHLCQWNHYTNKRYLLELGITKEEFLAITW 353
Query: 1137 FTSWAVDADHSSDISDMVDQGFSVDSIEIKDSGEDACKIEGIVRGIPALERAVLGFMCKD 1316
FTSWAVDA+HS DISD+ D S E + G C ++ IV+ + +ERAVLGFMCK+
Sbjct: 354 FTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCMVKDIVKSMNPVERAVLGFMCKE 413
Query: 1317 IIDIGRLMWIKKHSLGARLVKYVSSRVSPENHLLVAK 1427
IID+GRLMW+K+ L +LVKYV S +SPENHLL+AK
Sbjct: 414 IIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAK 450
>ref|XP_004135966.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
[Cucumis sativus]
Length = 458
Score = 560 bits (1444), Expect = e-157
Identities = 284/457 (62%), Positives = 337/457 (73%), Gaps = 7/457 (1%)
Frame = +3
Query: 78 RCNFWLPRKNRFCANIAITHSLFCGNHNPNFEQQRVPCPLDPSHSVLKENMEVHIKRCPF 257
RC FWLP+KNRFCA I S FCGNH+ + VPCP+DPSHSVL+EN++ H+KRCP
Sbjct: 4 RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKRCPL 63
Query: 258 LKQAETLRLQPYYNKGINGGSEENCSDI--QETTSTTISPLMKRNAVYGMSVTEFLGLIN 431
LKQ ++L QP+Y KGIN G E++ S S +IS MKRN VYGMS +F L+
Sbjct: 64 LKQTQSLAGQPFYQKGINAGEEDSMSSNGPHSGLSDSISSEMKRNIVYGMSGDQFHRLLG 123
Query: 432 KIRLIHGSACLDIRDSFKMPEVCSVWMKREVDGKLPFQEKHVLQQASILGNMDEFGLFSS 611
KIR +H C DI+DS+K+ E C++W+K E+D K+PFQEKHVLQQASILGN+DEFG+ S+
Sbjct: 124 KIRALHDLICKDIQDSYKIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGVLSN 183
Query: 612 STDGVVNRQLEQQQECNGSLRDGNGVSAVVEFGAGRGYLTQMLADCYGINKVFLVERRSY 791
G EQ++ D N V AVVEFGAGRGYLTQMLADCYGI +VFLVER+SY
Sbjct: 184 YDGG------EQREGDRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSY 237
Query: 792 KLKADRSLRQKESLILERLRIDIEDLVLSSVESLRGVPYLAVGKHLCGPATDLTLRCCL- 968
KLKADRSLRQKESLILERLRIDIEDL L++VESLR PYLA+GKHLCGPATDL LRCCL
Sbjct: 238 KLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLT 297
Query: 969 ----HAHSSQDRVLLASDNHLRGLAIATCCHHLCQWKHYINKGYLSELGITKNEFHAITW 1136
HA + + R + LRGLAIATCCHHLCQW HY NK YL ELGITK EF AITW
Sbjct: 298 KQPNHAVTERCR----DKSKLRGLAIATCCHHLCQWNHYTNKRYLLELGITKEEFLAITW 353
Query: 1137 FTSWAVDADHSSDISDMVDQGFSVDSIEIKDSGEDACKIEGIVRGIPALERAVLGFMCKD 1316
FTSWAVDA+HS DISD+ D S E + G C ++ IV+ + +ERAVLGFMCK+
Sbjct: 354 FTSWAVDANHSEDISDVTDSKTFFQSSENESDGMIGCMVKDIVKSMNPVERAVLGFMCKE 413
Query: 1317 IIDIGRLMWIKKHSLGARLVKYVSSRVSPENHLLVAK 1427
IID+GRLMW+K+ L +LVKYV S +SPENHLL+AK
Sbjct: 414 IIDMGRLMWLKECGLETQLVKYVPSTISPENHLLIAK 450