BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004785
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              245   3e-70
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   239   2e-68
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   226   6e-64
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   217   6e-61
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   209   9e-59

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  245 bits (626), Expect(2) = 3e-70
 Identities = 119/185 (64%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
 Frame = -3

Query: 1075 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRMVGETDNIG 899
            M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1    MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 898  ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 725
            ASYDRYLR+ Q+P+YG +SGR L GG+  HP DD R+ GVRG D               +
Sbjct: 61   ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120

Query: 724  PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 545
            PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV
Sbjct: 121  PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 180

Query: 544  DFGTP 530
            DF +P
Sbjct: 181  DFVSP 185



 Score = 47.8 bits (112), Expect(2) = 3e-70
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1

Query: 432 QGYKFDEHDRDSDNLRLQFARY 367
           QGYKFDEHDRDS NLRLQFARY
Sbjct: 196 QGYKFDEHDRDSVNLRLQFARY 217


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  239 bits (609), Expect(2) = 2e-68
 Identities = 118/185 (63%), Positives = 143/185 (77%), Gaps = 3/185 (1%)
 Frame = -3

Query: 1075 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRMVGETDNIG 899
            M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1    MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 898  ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 725
            ASYDRYLR+  +P+YG +SGR L GG+  HP DD R+ GVRG D               +
Sbjct: 61   ASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 119

Query: 724  PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 545
            PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV
Sbjct: 120  PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 179

Query: 544  DFGTP 530
            DF +P
Sbjct: 180  DFVSP 184



 Score = 47.8 bits (112), Expect(2) = 2e-68
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1

Query: 432 QGYKFDEHDRDSDNLRLQFARY 367
           QGYKFDEHDRDS NLRLQFARY
Sbjct: 195 QGYKFDEHDRDSVNLRLQFARY 216


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  226 bits (576), Expect(2) = 6e-64
 Identities = 112/188 (59%), Positives = 137/188 (72%), Gaps = 6/188 (3%)
 Frame = -3

Query: 1075 MGDAYWRYNEARQAP---LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRMVGETDN 905
            M DAYWRY ++RQ P   L  +  KR+RSDYD+P GHE+PSY+SR+DER + R + +TD+
Sbjct: 1    MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 904  IGASYDRYLRSGQIPTYG--ESGRSLGGGMIGHPADDMRMSGVRGFDPMXXXXXXXXXXX 731
            IGASYDRYLRS Q+ +YG  +S R + GGM     DD R+ G+   +P            
Sbjct: 61   IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 730  XK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 554
               PE+PLP DAS+TLFVEGLP NCTRREV+HIFRPFVG+KEVRLVSKE+RHPGGD LVL
Sbjct: 121  GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 553  CFVDFGTP 530
            CFVDF +P
Sbjct: 181  CFVDFLSP 188



 Score = 45.8 bits (107), Expect(2) = 6e-64
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 432 QGYKFDEHDRDSDNLRLQFARY 367
           QGYKFDEHDRDS +LRLQFARY
Sbjct: 199 QGYKFDEHDRDSVSLRLQFARY 220


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
            guineensis]
          Length = 294

 Score =  217 bits (552), Expect(2) = 6e-61
 Identities = 115/205 (56%), Positives = 136/205 (66%), Gaps = 19/205 (9%)
 Frame = -3

Query: 1087 EK*KMGDAYWRYNEARQAPL----PPVALKRARSDY-DMPGGHEMPSYYSREDERASYRM 923
            E+ +M DAYWRY++ R        P   LKR R+DY D+PGG E+  YYSR++ER  +R 
Sbjct: 31   ERPRMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRT 90

Query: 922  VGETDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGVRGFD--------- 770
            + +T++I ASYDRYLR+G     GES R++ GGM GHP DD RM GV G D         
Sbjct: 91   IRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGG 150

Query: 769  ----PMXXXXXXXXXXXXK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEV 605
                P+              PE PLP DASNTLFVEGLP NCTRREVSHIFRPFVGF+EV
Sbjct: 151  RPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREV 210

Query: 604  RLVSKEARHPGGDQLVLCFVDFGTP 530
            RLV+KE+RHPGGD LVLCFVDF TP
Sbjct: 211  RLVNKESRHPGGDPLVLCFVDFSTP 235



 Score = 45.1 bits (105), Expect(2) = 6e-61
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -1

Query: 432 QGYKFDEHDRDSDNLRLQFARY 367
           QGYKFDEHDR+S NLRLQFAR+
Sbjct: 246 QGYKFDEHDRESANLRLQFARF 267


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223545062|gb|EEF46575.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 232

 Score =  209 bits (531), Expect(2) = 9e-59
 Identities = 106/188 (56%), Positives = 136/188 (72%), Gaps = 6/188 (3%)
 Frame = -3

Query: 1075 MGDAYWRYNEARQA---PLPPVALKRARSDYDMPGGHEMPSYYSREDERASYRMVGETDN 905
            M DAYWRY++ARQ    P+P +  KR+RSDYD+  GHE+P+YY+R+D+R + R + +TD+
Sbjct: 1    MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 904  IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXX 734
            IGASYDRYLRS  I +Y  G+S R + G +    ADD R+ G+ G DP            
Sbjct: 61   IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 733  XXKPEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 554
              +PE  LP DA++TLFVEGLP +C+RREV+HIFRPFVG+KEVRLVSKE+R PGGD LVL
Sbjct: 120  SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179

Query: 553  CFVDFGTP 530
            CFVDF +P
Sbjct: 180  CFVDFLSP 187



 Score = 45.8 bits (107), Expect(2) = 9e-59
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 432 QGYKFDEHDRDSDNLRLQFARY 367
           QGYKFDEHDRDS +LRLQFARY
Sbjct: 198 QGYKFDEHDRDSVHLRLQFARY 219