BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004767
         (1564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   450   e-124
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   450   e-124
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   443   e-122
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   440   e-121
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni...   440   e-121

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  450 bits (1157), Expect = e-124
 Identities = 250/364 (68%), Positives = 261/364 (71%)
 Frame = -2

Query: 1095 KSKRISGFDMAPPVSTLLAGPPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 916
            KSKR+SGFDMAPP S +LAG   A                                    
Sbjct: 162  KSKRVSGFDMAPPASAMLAGAAAAADFTGQIPGTTPTIP--------------------- 200

Query: 915  GMLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMS 736
            GM   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMS
Sbjct: 201  GMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMS 259

Query: 735  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 556
            AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN
Sbjct: 260  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 319

Query: 555  PSLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGP 376
            PSLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGP
Sbjct: 320  PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 379

Query: 375  LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDIACAALNGIKMGDKTLTVRRANQGA 196
            LR                             SVTDIACAALNGIKMGDKTLTVRRANQGA
Sbjct: 380  LR-----GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 434

Query: 195  SQPKPEQETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVED 16
            SQPKPEQE               +FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVED
Sbjct: 435  SQPKPEQENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVED 492

Query: 15   MREE 4
            MR E
Sbjct: 493  MRIE 496


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  450 bits (1157), Expect = e-124
 Identities = 250/364 (68%), Positives = 261/364 (71%)
 Frame = -2

Query: 1095 KSKRISGFDMAPPVSTLLAGPPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 916
            KSKR+SGFDMAPP S +LAG   A                                    
Sbjct: 162  KSKRVSGFDMAPPASAMLAGAAAAAGQIPGTTPTIP------------------------ 197

Query: 915  GMLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMS 736
            GM   +FPL++G  F  LPVMPVQAMTQQATRHARRVYVGGLSP+ANEQSVATFFSQVMS
Sbjct: 198  GMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMS 256

Query: 735  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 556
            AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN
Sbjct: 257  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 316

Query: 555  PSLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGP 376
            PSLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGP
Sbjct: 317  PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 376

Query: 375  LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDIACAALNGIKMGDKTLTVRRANQGA 196
            LR                             SVTDIACAALNGIKMGDKTLTVRRANQGA
Sbjct: 377  LR-----GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 431

Query: 195  SQPKPEQETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVED 16
            SQPKPEQE               +FQ  PG L T+VVCLTQVV+ADEL+DD+ YEDIVED
Sbjct: 432  SQPKPEQENVLLHAQQQIALQRLMFQ--PGALATKVVCLTQVVNADELQDDEAYEDIVED 489

Query: 15   MREE 4
            MR E
Sbjct: 490  MRIE 493


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223535572|gb|EEF37240.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 549

 Score =  443 bits (1139), Expect = e-122
 Identities = 245/364 (67%), Positives = 256/364 (70%)
 Frame = -2

Query: 1095 KSKRISGFDMAPPVSTLLAGPPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 916
            KSKRISGFDMAPP S +L G                                        
Sbjct: 183  KSKRISGFDMAPPPSAMLTGAAAVAAAAGQIPGTAPAIP--------------------- 221

Query: 915  GMLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMS 736
            GM   +FPL TG  F TLPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFS VM+
Sbjct: 222  GMFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMA 281

Query: 735  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 556
            AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN
Sbjct: 282  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 341

Query: 555  PSLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGP 376
            PSLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE QIRELLESFGP
Sbjct: 342  PSLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 401

Query: 375  LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDIACAALNGIKMGDKTLTVRRANQGA 196
            LR                             SVTDIACAALNGIKMGDKTLTVRRANQGA
Sbjct: 402  LR-----GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 456

Query: 195  SQPKPEQETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVED 16
            +QPKPEQET              + Q     +PT+VVCLTQVV+ADEL+DD EYEDI+ED
Sbjct: 457  NQPKPEQETVLLHAQQQIALQRLMLQ----PVPTKVVCLTQVVTADELKDDDEYEDILED 512

Query: 15   MREE 4
            MR E
Sbjct: 513  MRTE 516


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  440 bits (1132), Expect = e-121
 Identities = 240/364 (65%), Positives = 260/364 (71%)
 Frame = -2

Query: 1095 KSKRISGFDMAPPVSTLLAGPPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 916
            KSKRISGFDMAPP + +L+G   A                                    
Sbjct: 184  KSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP------------------------ 219

Query: 915  GMLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMS 736
            GM  T+FPL+TG  F  LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFSQVM+
Sbjct: 220  GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 279

Query: 735  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 556
            AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN
Sbjct: 280  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 339

Query: 555  PSLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGP 376
            PSLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE Q+RELLESFGP
Sbjct: 340  PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGP 399

Query: 375  LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDIACAALNGIKMGDKTLTVRRANQGA 196
            LR                             SVTDIACAALNGIKMGDKTLTVRRANQGA
Sbjct: 400  LR-----GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 454

Query: 195  SQPKPEQETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVED 16
            +QPKPEQE+              + Q  PG + T+V+CLTQVV+ +EL +D++YEDI+ED
Sbjct: 455  NQPKPEQESVLLHAQQQIALQKLMLQ--PGAVSTKVLCLTQVVTPEELINDEDYEDIMED 512

Query: 15   MREE 4
            MR E
Sbjct: 513  MRGE 516


>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  440 bits (1132), Expect = e-121
 Identities = 240/364 (65%), Positives = 260/364 (71%)
 Frame = -2

Query: 1095 KSKRISGFDMAPPVSTLLAGPPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS 916
            KSKRISGFDMAPP + +L+G   A                                    
Sbjct: 184  KSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP------------------------ 219

Query: 915  GMLQTIFPLSTGTTFPTLPVMPVQAMTQQATRHARRVYVGGLSPSANEQSVATFFSQVMS 736
            GM  T+FPL+TG  F  LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFSQVM+
Sbjct: 220  GMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMA 279

Query: 735  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 556
            AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN
Sbjct: 280  AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYN 339

Query: 555  PSLAAALGPSHPNPNLNLIAVGLTAGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGP 376
            PSLAA LGPS PNPNLNL AVGLT GSAGGLEGPDRIFVGGLPYYFTE Q+RELLESFGP
Sbjct: 340  PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGP 399

Query: 375  LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTDIACAALNGIKMGDKTLTVRRANQGA 196
            LR                             SVTDIACAALNGIKMGDKTLTVRRANQGA
Sbjct: 400  LR-----GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGA 454

Query: 195  SQPKPEQETXXXXXXXXXXXXXXLFQGGPGVLPTRVVCLTQVVSADELRDDQEYEDIVED 16
            +QPKPEQE+              + Q  PG + T+V+CLTQVV+ +EL +D++YEDI+ED
Sbjct: 455  NQPKPEQESVLLHAQQQIALQKLMLQ--PGAVSTKVLCLTQVVTPEELINDEDYEDIMED 512

Query: 15   MREE 4
            MR E
Sbjct: 513  MRGE 516