BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004766
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2...   177   3e-42
gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]       174   3e-41
ref|NP_001078161.1| cytochrome c oxidase subunit Vb [Arabidopsis...   165   2e-38
dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]                         161   2e-37
ref|XP_002894400.1| hypothetical protein ARALYDRAFT_892286 [Arab...   161   2e-37

>ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Vitis
           vinifera] gi|297743391|emb|CBI36258.3| unnamed protein
           product [Vitis vinifera]
          Length = 176

 Score =  177 bits (450), Expect = 3e-42
 Identities = 95/166 (57%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
 Frame = +2

Query: 71  MWRRFVSNQVQTRTRSDLKHFNRSVSIAKQHILN--HQASSSPLYSPFLTTSSYALSRQF 244
           MWR  +S Q+QT  RS      RS +   + +    +++  SP  +PF  T+S   SRQF
Sbjct: 1   MWRGRLSAQLQTLARS------RSAANLTRLVTGDINRSFISPSPAPFRRTASL-FSRQF 53

Query: 245 SSDS-DTGLSKGKKKVEDVMPIATGHXXXXXXXXXXXXXXXXINHPVGPFGTKEEPAVIK 421
           S++S D  +SK KK+VEDVMPIATGH                 +HPVGPFGTKE PAV++
Sbjct: 54  SAESADNAVSKEKKRVEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQ 113

Query: 422 SYYDKRIVGCPGDEGEDEHDVVWFWLEKGKSHECPVCGQYFTLEVV 559
           SYYDKRIVGCPG EGEDEHDVVWFWLEKGKSHECPVC QYFTLEV+
Sbjct: 114 SYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQYFTLEVI 159


>gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]
          Length = 176

 Score =  174 bits (441), Expect = 3e-41
 Identities = 92/166 (55%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
 Frame = +2

Query: 71  MWRRFVSNQVQTRTRSDLKHFNRSVSIAKQHILN--HQASSSPLYSPFLTTSSYALSRQF 244
           MWR  +S Q+QT  RS      RS +   + +    +++  SP  +PF  T+S   SRQF
Sbjct: 1   MWRGRLSAQLQTLARS------RSAANLTRLVTGDINRSFISPSPAPFRRTASL-FSRQF 53

Query: 245 SSDS-DTGLSKGKKKVEDVMPIATGHXXXXXXXXXXXXXXXXINHPVGPFGTKEEPAVIK 421
           S++S D  +SK KK++EDVMPIATGH                 +HPVGPFGTKE PAV++
Sbjct: 54  SAESADNAVSKEKKRIEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQ 113

Query: 422 SYYDKRIVGCPGDEGEDEHDVVWFWLEKGKSHECPVCGQYFTLEVV 559
           SYYDKRI GCPG EGEDEHDVVWFWLEKG+SHECPVC QYFTLEV+
Sbjct: 114 SYYDKRIAGCPGGEGEDEHDVVWFWLEKGESHECPVCSQYFTLEVI 159


>ref|NP_001078161.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
           gi|332642186|gb|AEE75707.1| cytochrome c oxidase subunit
           Vb [Arabidopsis thaliana]
          Length = 175

 Score =  165 bits (417), Expect = 2e-38
 Identities = 88/164 (53%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
 Frame = +2

Query: 71  MWRRFVSNQVQTRTRSDLKHF-NRSVSIAKQHILNHQASSSPLYSPFLTTSSYALSRQFS 247
           MWRR VS+Q++T     +     RS++   + +  + A++    S     SS+ + R+FS
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAIS----ASSFVIPRRFS 56

Query: 248 SDSDTGLSKGKKKVEDVMPIATGHXXXXXXXXXXXXXXXXINHPVGPFGTKEEPAVIKSY 427
           SDS+T  +K   KVEDVMPIATGH                I+ P GPFGTKE PA++KSY
Sbjct: 57  SDSETPATK---KVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSY 113

Query: 428 YDKRIVGCPGDEGEDEHDVVWFWLEKGKSHECPVCGQYFTLEVV 559
           YDKRIVGCPG EGEDEHDVVWFWLEKGKS ECPVC QYF LEVV
Sbjct: 114 YDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVV 157


>dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]
          Length = 165

 Score =  161 bits (408), Expect = 2e-37
 Identities = 88/163 (53%), Positives = 105/163 (64%)
 Frame = +2

Query: 71  MWRRFVSNQVQTRTRSDLKHFNRSVSIAKQHILNHQASSSPLYSPFLTTSSYALSRQFSS 250
           MWRR VS+Q++T          RS + A +    +++  SP      + S+    R F++
Sbjct: 1   MWRRAVSSQLKTLASC------RSAAAAARFASPNRSIISP------SPSASLFHRYFNA 48

Query: 251 DSDTGLSKGKKKVEDVMPIATGHXXXXXXXXXXXXXXXXINHPVGPFGTKEEPAVIKSYY 430
           D+ +G S GK+ VED+MPIATG                 INHPVGPFGTKE PAV+KSYY
Sbjct: 49  DAASG-SVGKR-VEDIMPIATGSEREELEAELQGKDILEINHPVGPFGTKEAPAVVKSYY 106

Query: 431 DKRIVGCPGDEGEDEHDVVWFWLEKGKSHECPVCGQYFTLEVV 559
           DKRIVGCPG EGEDEHDVVWFWLEKGK HECPVC QYF LEVV
Sbjct: 107 DKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLEVV 149


>ref|XP_002894400.1| hypothetical protein ARALYDRAFT_892286 [Arabidopsis lyrata subsp.
           lyrata] gi|297340242|gb|EFH70659.1| hypothetical protein
           ARALYDRAFT_892286 [Arabidopsis lyrata subsp. lyrata]
          Length = 176

 Score =  161 bits (408), Expect = 2e-37
 Identities = 92/166 (55%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
 Frame = +2

Query: 71  MWRRFVSNQVQT-RTRSD--LKHFNRSVSIAKQHILNHQASSSPLYSPFLTTSSYALSRQ 241
           MWRR VS+ +++  T SD  +   +R   ++K   L+   + S +     + SS  LSR 
Sbjct: 1   MWRRIVSSNLKSLATASDFAVASSSRRFVVSKPVGLHLSTNRSTI-----SASSSLLSRH 55

Query: 242 FSSDSDTGLSKGKKKVEDVMPIATGHXXXXXXXXXXXXXXXXINHPVGPFGTKEEPAVIK 421
           FSS+S  G S  KK VEDVMPIATGH                I++P GPFGTKE PAV+K
Sbjct: 56  FSSES-AGTSV-KKNVEDVMPIATGHEREELEAELEGRRLLDIDYPEGPFGTKESPAVVK 113

Query: 422 SYYDKRIVGCPGDEGEDEHDVVWFWLEKGKSHECPVCGQYFTLEVV 559
           SYYDKRIVGCPG EGEDEHDVVWFWLEKGKS ECPVC QYF LEVV
Sbjct: 114 SYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCSQYFELEVV 159