BLASTX nr result

ID: Coptis23_contig00004760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004760
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-lik...   340   5e-91
emb|CBI40402.3| unnamed protein product [Vitis vinifera]              317   7e-84
ref|XP_002275405.2| PREDICTED: C-terminal binding protein AN-lik...   316   9e-84
ref|XP_002511915.1| 2-hydroxyacid dehydrogenase, putative [Ricin...   312   2e-82
ref|XP_002892061.1| hypothetical protein ARALYDRAFT_311286 [Arab...   310   7e-82

>ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-like [Cucumis sativus]
          Length = 944

 Score =  340 bits (873), Expect = 5e-91
 Identities = 180/309 (58%), Positives = 230/309 (74%)
 Frame = -3

Query: 1447 NSSMSITIPKKPTYLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREIG 1268
            +SSM I+   + +   TNG +L   SAWFE+RLFYVRISPCVI +VP+ L + HLRREIG
Sbjct: 7    DSSMPIS---RTSNSYTNGLSLTH-SAWFEVRLFYVRISPCVIASVPDHLNLRHLRREIG 62

Query: 1267 VSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMI 1088
            VS+EINGS+IPASD+A++ LRRDR++KE+SEVTYVSTDSIRVTG +EFEVYEN +   +I
Sbjct: 63   VSLEINGSQIPASDSASIALRRDRLNKESSEVTYVSTDSIRVTGGVEFEVYENED---LI 119

Query: 1087 LCGSLERIDSSWSXXXXXXXXXXXXXEKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVLC 908
            LCGSLER+D++W              E + KTGW+M+C++A+ + +G SAFFQPKLGV  
Sbjct: 120  LCGSLERMDANW-------INGSVGLENNSKTGWTMECFMAASMCSGSSAFFQPKLGVSS 172

Query: 907  PSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGIIRQR 728
            P+IEVY+AGCCSG+P+ILT+TIQ+SPRR+ +R   LDAIPEDEE GKE   GSNG+IR +
Sbjct: 173  PAIEVYIAGCCSGMPVILTQTIQVSPRRRNLRQAVLDAIPEDEEVGKEE-NGSNGLIRHQ 231

Query: 727  KFEVSDSEVEEYDPERKVTPGYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXX 548
            K ++ +SEV++YDP+ K+  GYY +DM YT EDGQL+WFNAGVR                
Sbjct: 232  KVQMLESEVDDYDPDGKMGHGYYGDDM-YTGEDGQLSWFNAGVRVGVGIGLGVCLGVGIG 290

Query: 547  XXXLMRSYQ 521
               LMRSYQ
Sbjct: 291  VGLLMRSYQ 299


>emb|CBI40402.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  317 bits (811), Expect = 7e-84
 Identities = 174/311 (55%), Positives = 216/311 (69%), Gaps = 5/311 (1%)
 Frame = -3

Query: 1435 SITIPKKPT-----YLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREI 1271
            SI   K P      Y + +G +  PPS   EIRLFYVRI+PCVI++VP+ L + H+RR I
Sbjct: 55   SIASAKSPNSRSNLYRIIDGHS-SPPSVSLEIRLFYVRIAPCVIDSVPDHLTLCHIRRGI 113

Query: 1270 GVSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMM 1091
            GVS+EING++IPAS+TA+LTLRRDR+DKE+SEV YVSTDS+RV G +EFEVYE    + M
Sbjct: 114  GVSLEINGARIPASETASLTLRRDRLDKESSEVIYVSTDSVRVAGGVEFEVYE---KEEM 170

Query: 1090 ILCGSLERIDSSWSXXXXXXXXXXXXXEKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVL 911
            ILCGSLER++SSW              E   +TGW MDCY A+ V  G SAFFQPKLGV 
Sbjct: 171  ILCGSLERMESSWG-------NGSGGLENGSRTGWDMDCYTAASVVAGSSAFFQPKLGVS 223

Query: 910  CPSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGIIRQ 731
             PSIEVY+AGC S +P+ILTKTIQ+SPR+KA RHG LDAIPE EE GK     SNG +RQ
Sbjct: 224  SPSIEVYIAGCSSSMPVILTKTIQISPRQKASRHGMLDAIPEGEEIGKAQ-ENSNGTVRQ 282

Query: 730  RKFEVSDSEVEEYDPERKVTPGYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXX 551
            RK  +++++ ++Y+ + K+  G++SEDM Y+ EDGQLTWFNAGVR               
Sbjct: 283  RKDMITEAD-DDYESDGKIGHGFHSEDM-YSGEDGQLTWFNAGVRVGVGIGLGMCLGIGI 340

Query: 550  XXXXLMRSYQA 518
                LMRSYQA
Sbjct: 341  GVGLLMRSYQA 351


>ref|XP_002275405.2| PREDICTED: C-terminal binding protein AN-like [Vitis vinifera]
          Length = 952

 Score =  316 bits (810), Expect = 9e-84
 Identities = 175/311 (56%), Positives = 213/311 (68%), Gaps = 5/311 (1%)
 Frame = -3

Query: 1435 SITIPKKPT-----YLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREI 1271
            SI   K P      Y + +G +  PPS   EIRLFYVRI+PCVI++VP+ L + H+RR I
Sbjct: 9    SIASAKSPNSRSNLYRIIDGHS-SPPSVSLEIRLFYVRIAPCVIDSVPDHLTLCHIRRGI 67

Query: 1270 GVSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMM 1091
            GVS+EING++IPAS+TA+LTLRRDR+DKE+SEV YVSTDS+RV G +EFEVYE    + M
Sbjct: 68   GVSLEINGARIPASETASLTLRRDRLDKESSEVIYVSTDSVRVAGGVEFEVYE---KEEM 124

Query: 1090 ILCGSLERIDSSWSXXXXXXXXXXXXXEKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVL 911
            ILCGSLER++SSW              E   +TGW MDCY A+ V  G SAFFQPKLGV 
Sbjct: 125  ILCGSLERMESSWG-------NGSGGLENGSRTGWDMDCYTAASVVAGSSAFFQPKLGVS 177

Query: 910  CPSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGIIRQ 731
             PSIEVY+AGC S +P+ILTKTIQ+SPR+KA RHG LDAIPE EE GK     SNG +RQ
Sbjct: 178  SPSIEVYIAGCSSSMPVILTKTIQISPRQKASRHGMLDAIPEGEEIGKAQ-ENSNGTVRQ 236

Query: 730  RKFEVSDSEVEEYDPERKVTPGYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXX 551
            RK  V +   ++Y+ + K+  G++SEDM Y+ EDGQLTWFNAGVR               
Sbjct: 237  RKDMVMEFCHDDYESDGKIGHGFHSEDM-YSGEDGQLTWFNAGVRVGVGIGLGMCLGIGI 295

Query: 550  XXXXLMRSYQA 518
                LMRSYQA
Sbjct: 296  GVGLLMRSYQA 306


>ref|XP_002511915.1| 2-hydroxyacid dehydrogenase, putative [Ricinus communis]
            gi|223549095|gb|EEF50584.1| 2-hydroxyacid dehydrogenase,
            putative [Ricinus communis]
          Length = 930

 Score =  312 bits (799), Expect = 2e-82
 Identities = 167/295 (56%), Positives = 208/295 (70%), Gaps = 1/295 (0%)
 Frame = -3

Query: 1399 TNGPNLQPPSA-WFEIRLFYVRISPCVINNVPEFLKILHLRREIGVSMEINGSKIPASDT 1223
            +N  NL   SA W EIRLFYVRI+PCVI++VP+ L + HLRREI   +EINGS+IPA+D+
Sbjct: 8    SNSYNLITSSATWLEIRLFYVRITPCVIDSVPDHLTLRHLRREISTPLEINGSRIPAADS 67

Query: 1222 ATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMILCGSLERIDSSWSXX 1043
            A++TLRRDR++KE+SEVTYVSTDS+R+TGA+EFEV E N+   + LCGSLERI+S+    
Sbjct: 68   ASVTLRRDRLNKESSEVTYVSTDSVRITGALEFEVIEEND---LFLCGSLERIEST---- 120

Query: 1042 XXXXXXXXXXXEKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVLCPSIEVYVAGCCSGVP 863
                         D KTGWSM+CY+A+ V  G S FFQPKLGV  P+IEVY+AGCC G+P
Sbjct: 121  --------TLWGNDSKTGWSMECYMAASVGEGNSVFFQPKLGVSAPAIEVYIAGCCGGIP 172

Query: 862  LILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGIIRQRKFEVSDSEVEEYDPE 683
            +ILTKTI +SPR+K  RHG LDAIPEDEE  KE+ G ++  +R RK ++ +SE ++ D E
Sbjct: 173  VILTKTILVSPRKKGSRHGMLDAIPEDEEMEKEHNGDAS--LRLRKVQIIESEGDDSDLE 230

Query: 682  RKVTPGYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXLMRSYQA 518
             K    YYS+DMYY  EDGQLTWFNAGVR                   LMRSYQA
Sbjct: 231  EKTGNRYYSDDMYY-GEDGQLTWFNAGVRVGVGIGLGMCLGIGIGVGLLMRSYQA 284


>ref|XP_002892061.1| hypothetical protein ARALYDRAFT_311286 [Arabidopsis lyrata subsp.
            lyrata] gi|297337903|gb|EFH68320.1| hypothetical protein
            ARALYDRAFT_311286 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score =  310 bits (794), Expect = 7e-82
 Identities = 163/292 (55%), Positives = 201/292 (68%), Gaps = 7/292 (2%)
 Frame = -3

Query: 1372 SAWFEIRLFYVRISPCVINNVPEFLKILHLRREIGVSMEINGSKIPASDTATLTLRRDRI 1193
            SAW E+RLFYVRI+PCV+ NVP+FL + H RRE G S+E+NG ++P+S TA+L LRRDR+
Sbjct: 41   SAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRV 100

Query: 1192 DKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMILCGSLERIDSSWSXXXXXXXXXXXX 1013
            D+E+SEVTYVST+++RVTG ++FEVY+   ND M+LCG+L+RI+ +W+            
Sbjct: 101  DRESSEVTYVSTETVRVTGCVDFEVYD---NDDMVLCGNLDRIEGAWN----------NG 147

Query: 1012 XEKDLKTGWSMDCYIASG----VTTGGSAFFQPKLGVLCPSIEVYVAGCCSGVPLILTKT 845
               D KTGW MDCYIA G         SAFFQPKLGV  PS+EVY+AGCC GVP+ILTKT
Sbjct: 148  TVSDPKTGWGMDCYIAMGNGHVSGPSSSAFFQPKLGVSSPSVEVYIAGCCGGVPVILTKT 207

Query: 844  IQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNG--IIRQRKFEVSDSEVEEYD-PERKV 674
            IQ SPRRK  RH  LDAIPEDEE GKE   G+ G  + RQ K ++ +SEV++YD  E K+
Sbjct: 208  IQASPRRKVARHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDDYDESEMKM 267

Query: 673  TPGYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXLMRSYQA 518
               YY E M Y DEDGQL+WFNAGVR                   LMRSYQA
Sbjct: 268  AQRYYPEGM-YVDEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQA 318


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