BLASTX nr result

ID: Coptis23_contig00004753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004753
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247...    61   1e-07
emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]    61   1e-07
ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera]
          Length = 3288

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = +3

Query: 12  KSLPEDEVGQGRWVECGPET--LHKTHANRRANLYGNDYENFLKGKTIPKSEGRSHDIGR 185
           KS  E E  QG WVE GP +  +H     +  +   +  E  L       ++G  +  G+
Sbjct: 207 KSTLEGEFAQGMWVEWGPSSTSVHYREVKKDDSWCCDAPEIVLDVNGSSGTKGSCNFCGK 266

Query: 186 GQNGELSMMDYTLKKWLKTFYTKVEIVELEGDFCTRFPVKPSYPSS 323
            ++ E S    T KKWL++F T  E V+ EG+  TRFP KPSYP S
Sbjct: 267 DRDDE-SARSLTSKKWLRSFLTTAETVKSEGNIWTRFPEKPSYPCS 311


>emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]
          Length = 995

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = +3

Query: 12  KSLPEDEVGQGRWVECGPET--LHKTHANRRANLYGNDYENFLKGKTIPKSEGRSHDIGR 185
           KS  E E  QG WVE GP +  +H     +  +   +  E  L       ++G  +  G+
Sbjct: 207 KSTLEGEFAQGMWVEWGPSSTSVHYREVKKDDSWCCDAPEIVLDVNGSSGTKGSCNFCGK 266

Query: 186 GQNGELSMMDYTLKKWLKTFYTKVEIVELEGDFCTRFPVKPSYPSS 323
            ++ E S    T KKWL++F T  E V+ EG+  TRFP KPSYP S
Sbjct: 267 DRDDE-SARSLTSKKWLRSFLTTAETVKSEGNIWTRFPEKPSYPCS 311


>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +3

Query: 12  KSLPEDEVGQGRWVECGPETLHKTHANRRAN--LYGNDYENFLKGKTIPKSEGRSHDIGR 185
           K+  EDE GQGRWV+ GP +    +   R +  L        +       + G   DI +
Sbjct: 180 KTALEDEFGQGRWVDWGPSSTPAQNLKDRGSSGLCSEGTSTVVADDRANGNRGSLQDIDK 239

Query: 186 GQNGELSMMDYTLKKWLKTFYTKVEIVELEGDFCTRFPVKPSYPSS 323
               +  +     K+WL++F  KV+ ++ EG+  TRFP K S+P S
Sbjct: 240 ESGADELLRGVASKRWLRSFSIKVKTIKSEGNIWTRFPEKASFPGS 285


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